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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:31.6TPM
GTEx:7.7RPKM
FANTOM5:35.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA054134

 

Glandular cells

Medium  
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

31.6

overview Male, age 65
Sample 1
TPM: 19.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 12.0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 29.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 65.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

7.7

GTEx sample id

RPKM

3.36.410.30.120.102468101214161820222426
 
3.36.410.30.120.102468101214161820222426

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 7.7
Samples: 88

Max RPKM: 26.6
Min RPKM: 0.1
Std RPKM: 5.3
Median RPKM: 6.4
GTEX-ZTPG-2626-SM-57WFX 26.6
GTEX-ZYWO-1526-SM-5SIAL 20.1
GTEX-13PL7-2626-SM-5IFH4 20.0
GTEX-13CF3-1226-SM-5LZXN 19.4
GTEX-Z9EW-0926-SM-5CVMM 18.1
GTEX-UPK5-2026-SM-4JBIM 17.9
GTEX-13FTW-2026-SM-5IJE2 17.9
GTEX-139YR-2226-SM-5IFFW 16.9
GTEX-VJYA-0926-SM-4KL1N 16.8
GTEX-X15G-1426-SM-4PQZK 16.5
GTEX-14E6E-1626-SM-5RQI7 14.7
GTEX-13111-1426-SM-5DUW3 14.1
GTEX-XXEK-1026-SM-4BRUW 13.8
GTEX-11DXX-1626-SM-5H11H 12.9
GTEX-11NSD-1726-SM-5N9C3 11.7
GTEX-13D11-0726-SM-5LZZB 11.6
GTEX-X5EB-1626-SM-4E3IV 11.6
GTEX-ZTX8-0526-SM-59HLD 11.5
GTEX-13O61-1326-SM-5KM31 11.2
GTEX-1399S-2026-SM-5KM4B 10.7
GTEX-145LT-1026-SM-5LU9O 10.6
GTEX-1399R-2026-SM-5K7WN 10.4
GTEX-WRHK-1026-SM-4MVOD 10.3
GTEX-ZLFU-1526-SM-4WWBT 10.2
GTEX-11P7K-1626-SM-5GU63 10.0
GTEX-11VI4-1626-SM-5EQKO 9.5
GTEX-ZPIC-2326-SM-57WDW 9.2
GTEX-VUSG-1726-SM-4KKZL 9.1
GTEX-ZVP2-1726-SM-5GU5P 9.0
GTEX-11P82-0826-SM-5P9GU 8.9
GTEX-11DXZ-1326-SM-5H11X 8.8
GTEX-ZA64-1226-SM-5HL7B 8.7
GTEX-ZLV1-1126-SM-4WWBW 8.3
GTEX-ZQG8-2526-SM-57WEQ 8.3
GTEX-ZEX8-1826-SM-57WBH 8.2
GTEX-XBED-1426-SM-4AT4G 8.1
GTEX-WQUQ-2426-SM-4MVNW 8.1
GTEX-12BJ1-1926-SM-5HL9Z 7.6
GTEX-XAJ8-0526-SM-47JYK 6.9
GTEX-ZVZP-1826-SM-5GZXB 6.9
GTEX-YEC4-1726-SM-4W21E 6.8
GTEX-1122O-1326-SM-5H11F 6.8
GTEX-XUZC-1426-SM-4BRV3 6.6
GTEX-111YS-1426-SM-5GID8 6.5
GTEX-XGQ4-1326-SM-4GIDU 6.3
GTEX-ZZ64-0526-SM-5GZXM 6.3
GTEX-WFJO-0926-SM-4LVM2 6.3
GTEX-ZVT2-2126-SM-5NQ93 6.2
GTEX-1399U-2126-SM-5IFEZ 5.8
GTEX-13113-1226-SM-5EGHT 5.7
GTEX-WH7G-1626-SM-4LVMY 5.6
GTEX-ZC5H-2326-SM-4WAYT 5.5
GTEX-13FH7-1226-SM-5IJFK 5.5
GTEX-ZP4G-1626-SM-57WGD 5.4
GTEX-145ME-0926-SM-5O9AR 5.4
GTEX-Y3IK-1726-SM-4YCCR 5.3
GTEX-11XUK-1426-SM-5EQMG 5.2
GTEX-Y9LG-1626-SM-5IFHM 4.9
GTEX-148VJ-2226-SM-5NQ9M 4.8
GTEX-Y5LM-1626-SM-4VDTB 4.5
GTEX-ZPCL-1726-SM-57WEO 4.5
GTEX-ZYFG-2026-SM-5E43Y 4.4
GTEX-WFG7-1726-SM-4LVME 4.0
GTEX-Y114-1426-SM-4TT6W 3.8
GTEX-YB5E-1526-SM-5IFIE 3.7
GTEX-14DAR-1426-SM-5RQIR 3.3
GTEX-13QBU-1926-SM-5IJEW 3.2
GTEX-WEY5-1526-SM-4LMJF 3.1
GTEX-13RTK-0826-SM-5Q5C6 3.1
GTEX-11I78-1126-SM-5A5K5 3.1
GTEX-13O21-1026-SM-5IJDU 3.0
GTEX-YF7O-1826-SM-5IFIU 3.0
GTEX-ZXES-1526-SM-5NQ95 3.0
GTEX-131XF-1326-SM-5GCMQ 2.8
GTEX-11EQ9-1326-SM-5985X 2.7
GTEX-139T6-1026-SM-5IJGC 2.5
GTEX-133LE-1426-SM-5IFH1 2.4
GTEX-131XG-1726-SM-5LZUR 2.2
GTEX-ZF2S-1726-SM-57WFT 2.2
GTEX-ZTSS-0926-SM-59865 2.1
GTEX-XMK1-1826-SM-4B66F 1.7
GTEX-WFG8-1626-SM-4LVMB 1.1
GTEX-1192X-2526-SM-59868 1.1
GTEX-111CU-1326-SM-5NQ8L 0.9
GTEX-ZQUD-0926-SM-57WE3 0.8
GTEX-12WSK-1526-SM-5CVNO 0.8
GTEX-117YX-0326-SM-5GICL 0.6
GTEX-13OVI-1926-SM-5IJCG 0.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

35.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 35.7
FF:10024-101D6 15,40,85 years, mixed 35.7

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