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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:110.7TPM
GTEx:38.6RPKM
FANTOM5:195.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA001216

 

Antibody CAB004268

 

Adipocytes

Not detected   Not detected  

Glandular cells

Low   Medium  

Myoepithelial cells

Low   Medium  
   
   

BREAST - HPA RNA-seq

Average TPM

110.7

overview Female, age 52
Sample 1
TPM: 134.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 63.6
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 81.3
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 163.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

38.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 38.6
Samples: 214

Max RPKM: 95.5
Min RPKM: 5.2
Std RPKM: 18.1
Median RPKM: 36.1
GTEX-ZC5H-2626-SM-5J2MG 95.5
GTEX-WXYG-2226-SM-4E3IM 95.2
GTEX-ZVE2-1226-SM-5NQ8R 93.8
GTEX-WYBS-0926-SM-3NM94 89.3
GTEX-1269C-2426-SM-5FQSN 88.4
GTEX-131XW-0726-SM-5EGK3 87.9
GTEX-ZDXO-0126-SM-5S2ND 83.9
GTEX-XBED-1626-SM-47JYN 82.0
GTEX-ZDTT-2126-SM-5S2OJ 75.9
GTEX-WYVS-1726-SM-3NMAY 71.7
GTEX-13QIC-2326-SM-5LU5N 71.5
GTEX-XUJ4-1926-SM-4BOOV 71.1
GTEX-ZF29-1926-SM-5S2P1 70.9
GTEX-ZZPU-0626-SM-5E43T 69.7
GTEX-ZAJG-0626-SM-5HL8X 68.1
GTEX-ZPIC-1126-SM-5BC7F 65.9
GTEX-11DXZ-1926-SM-5GZZL 63.2
GTEX-11P7K-0726-SM-5EGKX 62.8
GTEX-13FTY-2226-SM-5J1ND 62.6
GTEX-11ZTT-2326-SM-5EQLG 62.4
GTEX-ZA64-1526-SM-5CVMD 62.3
GTEX-YB5K-1626-SM-5IFIN 62.2
GTEX-Y5V5-2126-SM-4WWFO 61.5
GTEX-13W3W-1226-SM-5LU4H 61.4
GTEX-T6MO-0326-SM-32QOK 61.1
GTEX-Y8LW-1626-SM-5IFHX 60.4
GTEX-WYJK-1326-SM-3NB2T 60.3
GTEX-QMRM-1626-SM-4R1KV 59.7
GTEX-X15G-1626-SM-3NMB3 58.2
GTEX-SIU7-1626-SM-4BRUK 56.4
GTEX-RWS6-1926-SM-47JXY 56.2
GTEX-U3ZH-1426-SM-4DXSR 56.2
GTEX-132Q8-1426-SM-5EGK7 54.8
GTEX-S4P3-1326-SM-4AD6V 54.6
GTEX-ZDYS-1126-SM-5K7UB 54.6
GTEX-139T6-1626-SM-5PNYZ 53.9
GTEX-147F4-2826-SM-5NQBN 53.9
GTEX-Y3IK-2326-SM-4WWDT 53.9
GTEX-ZLV1-1426-SM-4WWES 53.9
GTEX-R55F-1726-SM-2TF4R 53.7
GTEX-ZY6K-1626-SM-5GZWV 53.5
GTEX-XYKS-1326-SM-4BRUN 53.4
GTEX-1122O-1226-SM-5H113 53.3
GTEX-QDT8-0626-SM-48TYW 53.1
GTEX-11EM3-1326-SM-5N9C6 52.3
GTEX-RU72-0626-SM-46MUI 51.9
GTEX-XOT4-0726-SM-4GIAW 51.9
GTEX-145MN-1926-SM-5SIAI 51.5
GTEX-S4UY-0726-SM-4AD6X 51.0
GTEX-Y5LM-1726-SM-4VDSX 50.9
GTEX-XMD2-0926-SM-4WWEF 50.7
GTEX-ZV7C-1826-SM-5NQ83 50.2
GTEX-ZF3C-2326-SM-5S2MZ 50.1
GTEX-ZF2S-2026-SM-5E461 49.7
GTEX-1399U-1826-SM-5PNZ1 49.5
GTEX-13PL6-2926-SM-5L3I2 49.3
GTEX-VJWN-0726-SM-3GIJ8 49.0
GTEX-TMMY-0726-SM-33HBE 47.4
GTEX-UJHI-1426-SM-3DB9C 47.3
GTEX-Y114-2026-SM-4TT7L 47.1
GTEX-133LE-1726-SM-5K7VQ 46.7
GTEX-X4EP-2926-SM-3P5YQ 46.7
GTEX-T5JC-2126-SM-32PMO 46.2
GTEX-R3RS-0626-SM-48FE1 45.9
GTEX-12ZZX-1126-SM-5EGKB 45.0
GTEX-11I78-2226-SM-5PNYA 44.9
GTEX-S341-1526-SM-4AD6K 44.9
GTEX-Y3I4-1526-SM-4TT7K 44.9
GTEX-ZQUD-1926-SM-51MSA 44.9
GTEX-11P81-1926-SM-5BC53 44.7
GTEX-13FTW-1426-SM-5LZWZ 44.7
GTEX-14E6E-1326-SM-5S2NR 44.3
GTEX-TML8-1226-SM-32QON 44.3
GTEX-1211K-1926-SM-5EQLB 44.2
GTEX-ZVT4-1026-SM-57WC4 44.0
GTEX-YFCO-1826-SM-4W1YH 43.9
GTEX-131YS-0626-SM-5EGKL 43.4
GTEX-12BJ1-1826-SM-5HL9N 43.3
GTEX-ZXES-0826-SM-5E43C 43.3
GTEX-ZU9S-1926-SM-5NQBP 43.2
GTEX-SE5C-2126-SM-4BRUJ 42.5
GTEX-ZTX8-1226-SM-4YCE9 42.5
GTEX-XUW1-2326-SM-4BOO5 41.9
GTEX-TKQ2-1826-SM-33HB2 41.7
GTEX-YEC3-1026-SM-5IFI5 41.7
GTEX-14AS3-1626-SM-5S2OY 41.3
GTEX-Y9LG-1426-SM-5IFJZ 41.3
GTEX-117YX-1426-SM-5H12H 41.2
GTEX-T6MN-0726-SM-32PML 40.7
GTEX-13N11-1726-SM-5J1OJ 40.4
GTEX-13O3P-0826-SM-5L3DH 40.4
GTEX-11EMC-2026-SM-5A5JV 40.3
GTEX-R55D-0826-SM-48FEA 40.3
GTEX-11P82-1326-SM-5HL62 40.0
GTEX-145ME-1526-SM-5Q5F2 40.0
GTEX-T5JW-2026-SM-4DM63 40.0
GTEX-12WSK-2226-SM-5GCO5 39.8
GTEX-1192X-2326-SM-5987X 37.9
GTEX-ZQG8-0726-SM-5P9H9 37.5
GTEX-XUZC-1626-SM-4BRVP 37.4
GTEX-13NZ9-1026-SM-5MR5K 37.1
GTEX-146FH-0826-SM-5SI8T 36.8
GTEX-T2YK-2226-SM-32QPT 36.8
GTEX-Y5V6-2126-SM-4WWFX 36.8
GTEX-1314G-1226-SM-5BC6D 36.3
GTEX-139T8-0826-SM-5L3DE 36.2
GTEX-ZZ64-1226-SM-5E43R 36.2
GTEX-U3ZN-1926-SM-4DXSG 36.0
GTEX-WI4N-1426-SM-3LK7H 36.0
GTEX-11EI6-0626-SM-5985T 35.9
GTEX-13NZ8-0126-SM-5IJCT 35.7
GTEX-XMD1-0826-SM-4AT52 35.6
GTEX-11DXY-2326-SM-5GICW 35.0
GTEX-ZEX8-2226-SM-57WC6 35.0
GTEX-139TU-0626-SM-5KM3X 34.7
GTEX-11LCK-2426-SM-5HL5F 34.6
GTEX-ZVT2-1826-SM-5NQ8W 34.2
GTEX-XGQ4-0926-SM-4AT4U 32.8
GTEX-111YS-1926-SM-5GICC 32.7
GTEX-T2IS-1526-SM-32QPR 32.5
GTEX-U8XE-0826-SM-4E3J1 32.4
GTEX-WFON-1826-SM-3GILG 32.4
GTEX-13113-1726-SM-5GCOO 32.2
GTEX-WY7C-2726-SM-3NB3P 31.7
GTEX-13O3O-0826-SM-5K7WE 31.3
GTEX-WRHU-0326-SM-3MJFY 31.3
GTEX-QEG5-0726-SM-4R1JQ 31.2
GTEX-QEL4-2126-SM-447AE 31.1
GTEX-11GS4-2126-SM-5A5KR 31.0
GTEX-ZTTD-1026-SM-51MRD 30.7
GTEX-145LT-0726-SM-5S2VM 30.6
GTEX-W5X1-2326-SM-3GIL6 30.6
GTEX-YFC4-1426-SM-5IFJG 30.6
GTEX-11WQC-1726-SM-5GU4W 30.4
GTEX-UPK5-2326-SM-3P5Z8 30.1
GTEX-ZAB4-2526-SM-5HL8M 30.1
GTEX-U412-1826-SM-4DXTJ 30.0
GTEX-X261-0626-SM-3NMD9 29.8
GTEX-13FHO-0826-SM-5L3E8 29.6
GTEX-13OW5-2226-SM-5L3HC 29.6
GTEX-X4XY-0926-SM-4E3JD 29.4
GTEX-11OF3-1926-SM-59889 29.3
GTEX-11TUW-1826-SM-5BC5D 29.3
GTEX-11NV4-2026-SM-5N9DG 29.2
GTEX-ZVTK-0326-SM-51MRR 29.2
GTEX-ZVZQ-0826-SM-51MRF 29.2
GTEX-ZYT6-0126-SM-5E45J 28.8
GTEX-13NZB-2126-SM-5MR4Y 28.6
GTEX-11TT1-2126-SM-5GU5Y 28.3
GTEX-132NY-0826-SM-5K7Y7 28.0
GTEX-11GSO-1926-SM-5A5K3 27.9
GTEX-13FTX-1126-SM-5N9EN 27.9
GTEX-YB5E-1726-SM-5IFJ3 27.9
GTEX-144GM-0926-SM-5O994 27.8
GTEX-Q2AG-0326-SM-48U1O 27.5
GTEX-ZLFU-2126-SM-4WWEV 27.4
GTEX-TKQ1-0226-SM-33HB5 27.3
GTEX-13D11-1026-SM-5IJFB 27.0
GTEX-13O61-1826-SM-5KM4I 26.7
GTEX-13O3Q-2226-SM-5KM4O 26.6
GTEX-REY6-2426-SM-48FF5 25.9
GTEX-11PRG-0826-SM-5EQ6A 25.8
GTEX-12WSN-1326-SM-5GCNT 25.8
GTEX-11NSD-0926-SM-5N9DR 24.5
GTEX-ZUA1-1526-SM-59HLS 24.5
GTEX-ZV6S-1826-SM-5NQ8D 24.4
GTEX-1313W-0826-SM-5EQ4T 24.1
GTEX-PSDG-1626-SM-48TCQ 23.3
GTEX-RUSQ-2026-SM-4GIAK 23.1
GTEX-13OW8-0226-SM-5K7UP 22.9
GTEX-S33H-0326-SM-4AD6N 22.8
GTEX-14753-2426-SM-5LU8U 22.4
GTEX-13CF3-2126-SM-5IFJP 21.8
GTEX-R53T-1526-SM-48FEK 21.7
GTEX-S4Q7-1126-SM-4AD6R 21.6
GTEX-QVJO-1826-SM-447C9 21.4
GTEX-11ZUS-0826-SM-5FQUY 21.3
GTEX-12WSM-1726-SM-5BC6J 20.7
GTEX-11EQ9-1826-SM-5Q5AJ 20.4
GTEX-ZT9W-2026-SM-51MRA 20.4
GTEX-12WSB-0626-SM-59HJO 19.9
GTEX-YJ8O-2226-SM-5IFHW 19.4
GTEX-1117F-2826-SM-5GZXL 19.1
GTEX-VUSG-2226-SM-4KKZO 19.1
GTEX-145MO-0826-SM-5NQBL 18.8
GTEX-11ONC-2126-SM-5HL6E 18.6
GTEX-13W46-0826-SM-5LU3H 18.1
GTEX-ZYW4-0826-SM-5GIDG 18.1
GTEX-S7SE-0826-SM-4AT4D 17.8
GTEX-ZYFC-0826-SM-5E44K 17.6
GTEX-ZYWO-2326-SM-5GZY4 17.6
GTEX-12KS4-0126-SM-5Q5A5 17.2
GTEX-117XS-1926-SM-5GICO 17.0
GTEX-14ABY-2126-SM-5QGQZ 17.0
GTEX-WOFL-0826-SM-3MJG1 16.9
GTEX-Y111-2026-SM-4SOJA 16.6
GTEX-Y8E4-1626-SM-5S2MW 16.6
GTEX-UTHO-1026-SM-3GAF7 16.2
GTEX-11DXW-0626-SM-5N9ER 16.0
GTEX-144GL-2026-SM-5LU3O 15.8
GTEX-132AR-0826-SM-5EGK6 15.7
GTEX-13N1W-0626-SM-5MR4U 15.1
GTEX-XQ3S-1326-SM-4BOPQ 15.0
GTEX-13CF2-2026-SM-5K7VI 14.8
GTEX-XMK1-1126-SM-4IHJ8 14.8
GTEX-ZWKS-2826-SM-5NQ74 13.6
GTEX-XQ8I-2426-SM-4WAXY 12.9
GTEX-13S86-1226-SM-5S2OA 12.3
GTEX-11O72-2126-SM-5N9FO 10.4
GTEX-S32W-2026-SM-4AD6E 10.3
GTEX-XV7Q-2326-SM-4BRVZ 8.5
GTEX-11WQK-2426-SM-5GU5C 6.6
GTEX-13PVQ-1026-SM-5KM3M 5.8
GTEX-11DZ1-0326-SM-5N9BN 5.2
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

195.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 195.7
FF:10080-102A8 77 years, female 195.7

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