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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:27.9TPM
GTEx:16.1RPKM
FANTOM5:145.6Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA001216

 

Antibody CAB004268

 

Glandular cells

Low   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

27.9

overview Male, age 65
Sample 1
TPM: 21.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 28.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 38.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 22.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

16.1

GTEx sample id

RPKM

10.513.317.74.528.005101520253035404550
 
10.513.317.74.528.005101520253035404550

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 16.1
Samples: 88

Max RPKM: 51.3
Min RPKM: 4.5
Std RPKM: 9.1
Median RPKM: 13.3
GTEX-111CU-1326-SM-5NQ8L 51.3
GTEX-ZQUD-0926-SM-57WE3 47.8
GTEX-Y114-1426-SM-4TT6W 40.8
GTEX-117YX-0326-SM-5GICL 40.1
GTEX-ZF2S-1726-SM-57WFT 36.3
GTEX-ZQG8-2526-SM-57WEQ 33.8
GTEX-ZPIC-2326-SM-57WDW 31.7
GTEX-WEY5-1526-SM-4LMJF 30.3
GTEX-ZP4G-1626-SM-57WGD 29.6
GTEX-12WSK-1526-SM-5CVNO 29.4
GTEX-WFG7-1726-SM-4LVME 29.0
GTEX-13O21-1026-SM-5IJDU 28.0
GTEX-145ME-0926-SM-5O9AR 27.3
GTEX-13OVI-1926-SM-5IJCG 25.0
GTEX-13RTK-0826-SM-5Q5C6 24.0
GTEX-13111-1426-SM-5DUW3 21.8
GTEX-13QBU-1926-SM-5IJEW 20.3
GTEX-13113-1226-SM-5EGHT 20.3
GTEX-Y3IK-1726-SM-4YCCR 20.0
GTEX-ZPCL-1726-SM-57WEO 19.1
GTEX-XBED-1426-SM-4AT4G 18.3
GTEX-ZXES-1526-SM-5NQ95 17.8
GTEX-XMK1-1826-SM-4B66F 17.6
GTEX-12BJ1-1926-SM-5HL9Z 16.8
GTEX-131XF-1326-SM-5GCMQ 16.7
GTEX-WRHK-1026-SM-4MVOD 16.7
GTEX-1399U-2126-SM-5IFEZ 16.6
GTEX-1192X-2526-SM-59868 16.3
GTEX-139T6-1026-SM-5IJGC 15.3
GTEX-145LT-1026-SM-5LU9O 15.3
GTEX-ZVT2-2126-SM-5NQ93 15.1
GTEX-1399S-2026-SM-5KM4B 14.6
GTEX-YEC4-1726-SM-4W21E 14.4
GTEX-ZLV1-1126-SM-4WWBW 14.3
GTEX-13FH7-1226-SM-5IJFK 14.2
GTEX-11VI4-1626-SM-5EQKO 14.2
GTEX-ZLFU-1526-SM-4WWBT 14.1
GTEX-11P7K-1626-SM-5GU63 14.1
GTEX-ZZ64-0526-SM-5GZXM 13.6
GTEX-131XG-1726-SM-5LZUR 13.6
GTEX-14DAR-1426-SM-5RQIR 13.4
GTEX-XAJ8-0526-SM-47JYK 13.4
GTEX-13O61-1326-SM-5KM31 13.4
GTEX-11DXX-1626-SM-5H11H 13.3
GTEX-11EQ9-1326-SM-5985X 13.2
GTEX-XUZC-1426-SM-4BRV3 13.0
GTEX-X15G-1426-SM-4PQZK 12.9
GTEX-13PL7-2626-SM-5IFH4 12.5
GTEX-WFG8-1626-SM-4LVMB 12.5
GTEX-YB5E-1526-SM-5IFIE 12.2
GTEX-Y9LG-1626-SM-5IFHM 12.2
GTEX-Z9EW-0926-SM-5CVMM 12.2
GTEX-YF7O-1826-SM-5IFIU 12.0
GTEX-11I78-1126-SM-5A5K5 11.9
GTEX-13D11-0726-SM-5LZZB 11.8
GTEX-X5EB-1626-SM-4E3IV 11.5
GTEX-148VJ-2226-SM-5NQ9M 11.3
GTEX-139YR-2226-SM-5IFFW 11.3
GTEX-133LE-1426-SM-5IFH1 11.2
GTEX-ZTSS-0926-SM-59865 11.1
GTEX-ZVZP-1826-SM-5GZXB 11.0
GTEX-ZC5H-2326-SM-4WAYT 10.9
GTEX-1122O-1326-SM-5H11F 10.9
GTEX-11XUK-1426-SM-5EQMG 10.7
GTEX-Y5LM-1626-SM-4VDTB 10.5
GTEX-ZTX8-0526-SM-59HLD 10.5
GTEX-XGQ4-1326-SM-4GIDU 10.4
GTEX-ZA64-1226-SM-5HL7B 10.3
GTEX-11DXZ-1326-SM-5H11X 10.0
GTEX-ZVP2-1726-SM-5GU5P 9.8
GTEX-14E6E-1626-SM-5RQI7 9.8
GTEX-1399R-2026-SM-5K7WN 9.8
GTEX-13CF3-1226-SM-5LZXN 9.8
GTEX-11P82-0826-SM-5P9GU 9.6
GTEX-ZYFG-2026-SM-5E43Y 9.6
GTEX-WH7G-1626-SM-4LVMY 9.6
GTEX-ZTPG-2626-SM-57WFX 9.3
GTEX-ZYWO-1526-SM-5SIAL 9.2
GTEX-UPK5-2026-SM-4JBIM 8.8
GTEX-13FTW-2026-SM-5IJE2 8.7
GTEX-11NSD-1726-SM-5N9C3 8.4
GTEX-111YS-1426-SM-5GID8 8.3
GTEX-ZEX8-1826-SM-57WBH 7.7
GTEX-VJYA-0926-SM-4KL1N 7.2
GTEX-WFJO-0926-SM-4LVM2 7.2
GTEX-XXEK-1026-SM-4BRUW 7.1
GTEX-WQUQ-2426-SM-4MVNW 6.7
GTEX-VUSG-1726-SM-4KKZL 4.5
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

145.6

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 145.6
FF:10024-101D6 15,40,85 years, mixed 145.6

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The Human Protein Atlas project is funded
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