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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:24.6TPM
GTEx:12.3RPKM
FANTOM5:19.5Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Not detected
Myoepithelial cells:Not detected
 

Antibody staining

Antibody HPA036393

 

Antibody HPA064556

 

Antibody CAB007789

 

Adipocytes

Not detected   Not detected   Not detected  

Glandular cells

Low   Not detected   Not detected  

Myoepithelial cells

Low   Not detected   Not detected  
     
     

BREAST - HPA RNA-seq

Average TPM

24.6

overview Female, age 52
Sample 1
TPM: 19.7
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 24.0
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 28.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 25.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

12.3

GTEx sample id

RPKM

10.312.314.15.619.50246810121416182022
 
10.312.314.15.619.50246810121416182022

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 12.3
Samples: 214

Max RPKM: 23.3
Min RPKM: 5.6
Std RPKM: 2.8
Median RPKM: 12.3
GTEX-W5X1-2326-SM-3GIL6 23.3
GTEX-132Q8-1426-SM-5EGK7 20.8
GTEX-13N11-1726-SM-5J1OJ 19.5
GTEX-T6MN-0726-SM-32PML 19.0
GTEX-WYVS-1726-SM-3NMAY 18.4
GTEX-TML8-1226-SM-32QON 18.2
GTEX-XOT4-0726-SM-4GIAW 18.0
GTEX-13QIC-2326-SM-5LU5N 17.6
GTEX-TMMY-0726-SM-33HBE 17.5
GTEX-ZF29-1926-SM-5S2P1 17.5
GTEX-ZF2S-2026-SM-5E461 17.1
GTEX-139TU-0626-SM-5KM3X 16.9
GTEX-ZUA1-1526-SM-59HLS 16.9
GTEX-U3ZH-1426-SM-4DXSR 16.7
GTEX-12ZZX-1126-SM-5EGKB 16.6
GTEX-111YS-1926-SM-5GICC 16.3
GTEX-11EMC-2026-SM-5A5JV 16.3
GTEX-RWS6-1926-SM-47JXY 16.3
GTEX-Q2AG-0326-SM-48U1O 16.2
GTEX-T5JC-2126-SM-32PMO 16.2
GTEX-ZZPU-0626-SM-5E43T 16.2
GTEX-R55F-1726-SM-2TF4R 16.1
GTEX-WYBS-0926-SM-3NM94 16.1
GTEX-11ONC-2126-SM-5HL6E 16.0
GTEX-12WSB-0626-SM-59HJO 16.0
GTEX-146FH-0826-SM-5SI8T 15.7
GTEX-ZVTK-0326-SM-51MRR 15.6
GTEX-13FTY-2226-SM-5J1ND 15.5
GTEX-TKQ2-1826-SM-33HB2 15.5
GTEX-S4P3-1326-SM-4AD6V 15.3
GTEX-T2IS-1526-SM-32QPR 15.3
GTEX-TKQ1-0226-SM-33HB5 15.3
GTEX-U3ZN-1926-SM-4DXSG 15.3
GTEX-ZVZQ-0826-SM-51MRF 15.3
GTEX-VJWN-0726-SM-3GIJ8 15.2
GTEX-WRHU-0326-SM-3MJFY 15.2
GTEX-Y5V5-2126-SM-4WWFO 15.1
GTEX-131XW-0726-SM-5EGK3 15.0
GTEX-11GSO-1926-SM-5A5K3 14.8
GTEX-1269C-2426-SM-5FQSN 14.8
GTEX-R3RS-0626-SM-48FE1 14.8
GTEX-11P81-1926-SM-5BC53 14.7
GTEX-QDT8-0626-SM-48TYW 14.7
GTEX-12WSN-1326-SM-5GCNT 14.5
GTEX-WFON-1826-SM-3GILG 14.5
GTEX-ZEX8-2226-SM-57WC6 14.5
GTEX-117XS-1926-SM-5GICO 14.3
GTEX-WXYG-2226-SM-4E3IM 14.3
GTEX-ZF3C-2326-SM-5S2MZ 14.3
GTEX-11PRG-0826-SM-5EQ6A 14.2
GTEX-1314G-1226-SM-5BC6D 14.2
GTEX-S341-1526-SM-4AD6K 14.2
GTEX-UTHO-1026-SM-3GAF7 14.2
GTEX-UPK5-2326-SM-3P5Z8 14.1
GTEX-13OW8-0226-SM-5K7UP 14.0
GTEX-YJ8O-2226-SM-5IFHW 14.0
GTEX-139T8-0826-SM-5L3DE 13.9
GTEX-SIU7-1626-SM-4BRUK 13.9
GTEX-Y111-2026-SM-4SOJA 13.9
GTEX-Y5LM-1726-SM-4VDSX 13.8
GTEX-131YS-0626-SM-5EGKL 13.7
GTEX-S32W-2026-SM-4AD6E 13.7
GTEX-Y3IK-2326-SM-4WWDT 13.7
GTEX-11EI6-0626-SM-5985T 13.6
GTEX-11GS4-2126-SM-5A5KR 13.6
GTEX-RU72-0626-SM-46MUI 13.6
GTEX-ZYFC-0826-SM-5E44K 13.6
GTEX-144GL-2026-SM-5LU3O 13.5
GTEX-X4EP-2926-SM-3P5YQ 13.5
GTEX-ZXES-0826-SM-5E43C 13.5
GTEX-T6MO-0326-SM-32QOK 13.4
GTEX-WYJK-1326-SM-3NB2T 13.4
GTEX-ZC5H-2626-SM-5J2MG 13.4
GTEX-11DXW-0626-SM-5N9ER 13.3
GTEX-R53T-1526-SM-48FEK 13.2
GTEX-ZWKS-2826-SM-5NQ74 13.2
GTEX-XUW1-2326-SM-4BOO5 13.1
GTEX-YFC4-1426-SM-5IFJG 13.1
GTEX-13W3W-1226-SM-5LU4H 13.0
GTEX-ZYT6-0126-SM-5E45J 13.0
GTEX-1192X-2326-SM-5987X 12.9
GTEX-11NV4-2026-SM-5N9DG 12.9
GTEX-13113-1726-SM-5GCOO 12.9
GTEX-1122O-1226-SM-5H113 12.8
GTEX-11NSD-0926-SM-5N9DR 12.8
GTEX-11ZUS-0826-SM-5FQUY 12.8
GTEX-13PL6-2926-SM-5L3I2 12.8
GTEX-S33H-0326-SM-4AD6N 12.8
GTEX-S4UY-0726-SM-4AD6X 12.8
GTEX-Y8LW-1626-SM-5IFHX 12.8
GTEX-12WSM-1726-SM-5BC6J 12.7
GTEX-132NY-0826-SM-5K7Y7 12.7
GTEX-Y3I4-1526-SM-4TT7K 12.7
GTEX-ZVE2-1226-SM-5NQ8R 12.7
GTEX-11P7K-0726-SM-5EGKX 12.6
GTEX-13CF2-2026-SM-5K7VI 12.6
GTEX-T2YK-2226-SM-32QPT 12.6
GTEX-WOFL-0826-SM-3MJG1 12.6
GTEX-ZPIC-1126-SM-5BC7F 12.6
GTEX-11O72-2126-SM-5N9FO 12.5
GTEX-QEL4-2126-SM-447AE 12.5
GTEX-QMRM-1626-SM-4R1KV 12.5
GTEX-XBED-1626-SM-47JYN 12.5
GTEX-145MN-1926-SM-5SIAI 12.3
GTEX-S7SE-0826-SM-4AT4D 12.3
GTEX-UJHI-1426-SM-3DB9C 12.3
GTEX-ZDXO-0126-SM-5S2ND 12.3
GTEX-ZU9S-1926-SM-5NQBP 12.3
GTEX-11LCK-2426-SM-5HL5F 12.2
GTEX-X15G-1626-SM-3NMB3 12.2
GTEX-ZLV1-1426-SM-4WWES 12.2
GTEX-ZV7C-1826-SM-5NQ83 12.2
GTEX-11EM3-1326-SM-5N9C6 12.1
GTEX-11DXZ-1926-SM-5GZZL 12.0
GTEX-ZV6S-1826-SM-5NQ8D 12.0
GTEX-ZY6K-1626-SM-5GZWV 12.0
GTEX-1211K-1926-SM-5EQLB 11.9
GTEX-145ME-1526-SM-5Q5F2 11.9
GTEX-13OW5-2226-SM-5L3HC 11.8
GTEX-11OF3-1926-SM-59889 11.7
GTEX-11WQC-1726-SM-5GU4W 11.7
GTEX-11DXY-2326-SM-5GICW 11.6
GTEX-147F4-2826-SM-5NQBN 11.6
GTEX-ZDTT-2126-SM-5S2OJ 11.6
GTEX-ZDYS-1126-SM-5K7UB 11.6
GTEX-QEG5-0726-SM-4R1JQ 11.5
GTEX-VUSG-2226-SM-4KKZO 11.5
GTEX-117YX-1426-SM-5H12H 11.4
GTEX-1313W-0826-SM-5EQ4T 11.4
GTEX-14753-2426-SM-5LU8U 11.4
GTEX-XMK1-1126-SM-4IHJ8 11.4
GTEX-XQ8I-2426-SM-4WAXY 11.4
GTEX-ZTTD-1026-SM-51MRD 11.3
GTEX-ZYWO-2326-SM-5GZY4 11.3
GTEX-T5JW-2026-SM-4DM63 11.2
GTEX-13NZ8-0126-SM-5IJCT 11.1
GTEX-XMD2-0926-SM-4WWEF 11.0
GTEX-ZTX8-1226-SM-4YCE9 11.0
GTEX-XQ3S-1326-SM-4BOPQ 10.9
GTEX-XUZC-1626-SM-4BRVP 10.9
GTEX-XV7Q-2326-SM-4BRVZ 10.9
GTEX-Y114-2026-SM-4TT7L 10.9
GTEX-1117F-2826-SM-5GZXL 10.8
GTEX-133LE-1726-SM-5K7VQ 10.8
GTEX-14E6E-1326-SM-5S2NR 10.8
GTEX-QVJO-1826-SM-447C9 10.8
GTEX-X261-0626-SM-3NMD9 10.8
GTEX-XGQ4-0926-SM-4AT4U 10.8
GTEX-11EQ9-1826-SM-5Q5AJ 10.7
GTEX-12WSK-2226-SM-5GCO5 10.7
GTEX-XMD1-0826-SM-4AT52 10.7
GTEX-YEC3-1026-SM-5IFI5 10.7
GTEX-WI4N-1426-SM-3LK7H 10.6
GTEX-WY7C-2726-SM-3NB3P 10.6
GTEX-13O3Q-2226-SM-5KM4O 10.5
GTEX-PSDG-1626-SM-48TCQ 10.5
GTEX-13O3P-0826-SM-5L3DH 10.4
GTEX-REY6-2426-SM-48FF5 10.4
GTEX-SE5C-2126-SM-4BRUJ 10.4
GTEX-13CF3-2126-SM-5IFJP 10.3
GTEX-13FHO-0826-SM-5L3E8 10.3
GTEX-11DZ1-0326-SM-5N9BN 10.2
GTEX-139T6-1626-SM-5PNYZ 10.2
GTEX-XYKS-1326-SM-4BRUN 10.2
GTEX-ZAB4-2526-SM-5HL8M 10.2
GTEX-XUJ4-1926-SM-4BOOV 10.1
GTEX-132AR-0826-SM-5EGK6 10.0
GTEX-YB5K-1626-SM-5IFIN 10.0
GTEX-YFCO-1826-SM-4W1YH 10.0
GTEX-12KS4-0126-SM-5Q5A5 9.9
GTEX-1399U-1826-SM-5PNZ1 9.9
GTEX-13FTW-1426-SM-5LZWZ 9.9
GTEX-145MO-0826-SM-5NQBL 9.9
GTEX-S4Q7-1126-SM-4AD6R 9.9
GTEX-X4XY-0926-SM-4E3JD 9.9
GTEX-Y9LG-1426-SM-5IFJZ 9.9
GTEX-Y5V6-2126-SM-4WWFX 9.8
GTEX-ZVT2-1826-SM-5NQ8W 9.8
GTEX-11ZTT-2326-SM-5EQLG 9.7
GTEX-Y8E4-1626-SM-5S2MW 9.6
GTEX-13D11-1026-SM-5IJFB 9.5
GTEX-13FTX-1126-SM-5N9EN 9.5
GTEX-ZQUD-1926-SM-51MSA 9.5
GTEX-11I78-2226-SM-5PNYA 9.4
GTEX-13NZB-2126-SM-5MR4Y 9.4
GTEX-RUSQ-2026-SM-4GIAK 9.4
GTEX-144GM-0926-SM-5O994 9.1
GTEX-R55D-0826-SM-48FEA 9.1
GTEX-ZVT4-1026-SM-57WC4 9.1
GTEX-ZAJG-0626-SM-5HL8X 9.0
GTEX-13O61-1826-SM-5KM4I 8.9
GTEX-13W46-0826-SM-5LU3H 8.9
GTEX-14AS3-1626-SM-5S2OY 8.9
GTEX-ZA64-1526-SM-5CVMD 8.8
GTEX-12BJ1-1826-SM-5HL9N 8.7
GTEX-ZQG8-0726-SM-5P9H9 8.6
GTEX-13N1W-0626-SM-5MR4U 8.5
GTEX-13NZ9-1026-SM-5MR5K 8.5
GTEX-ZYW4-0826-SM-5GIDG 8.4
GTEX-ZZ64-1226-SM-5E43R 8.4
GTEX-YB5E-1726-SM-5IFJ3 8.2
GTEX-11TUW-1826-SM-5BC5D 8.1
GTEX-U412-1826-SM-4DXTJ 8.1
GTEX-13O3O-0826-SM-5K7WE 8.0
GTEX-ZLFU-2126-SM-4WWEV 8.0
GTEX-ZT9W-2026-SM-51MRA 8.0
GTEX-145LT-0726-SM-5S2VM 7.6
GTEX-13S86-1226-SM-5S2OA 6.8
GTEX-13PVQ-1026-SM-5KM3M 6.7
GTEX-11TT1-2126-SM-5GU5Y 6.6
GTEX-11WQK-2426-SM-5GU5C 6.0
GTEX-14ABY-2126-SM-5QGQZ 6.0
GTEX-U8XE-0826-SM-4E3J1 5.9
GTEX-11P82-1326-SM-5HL62 5.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

19.5

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 19.5
FF:10080-102A8 77 years, female 19.5

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