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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:53.7TPM
GTEx:13.6RPKM
FANTOM5:73.8Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA017324

 

Antibody CAB018649

 

Glandular cells

Medium   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

53.7

overview Male, age 65
Sample 1
TPM: 12.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 35.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 105.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 61.2

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 13.6
Samples: 88

Max RPKM: 85.3
Min RPKM: 1
Std RPKM: 15.1
Median RPKM: 7.7
GTEX-1192X-2526-SM-59868 85.3
GTEX-Y3IK-1726-SM-4YCCR 68.6
GTEX-117YX-0326-SM-5GICL 57.3
GTEX-131XG-1726-SM-5LZUR 45.8
GTEX-ZPIC-2326-SM-57WDW 43.3
GTEX-ZF2S-1726-SM-57WFT 38.4
GTEX-ZQUD-0926-SM-57WE3 38.3
GTEX-111CU-1326-SM-5NQ8L 33.2
GTEX-13QBU-1926-SM-5IJEW 30.9
GTEX-Y5LM-1626-SM-4VDTB 29.3
GTEX-13RTK-0826-SM-5Q5C6 29.0
GTEX-13OVI-1926-SM-5IJCG 28.8
GTEX-XMK1-1826-SM-4B66F 28.5
GTEX-13111-1426-SM-5DUW3 26.2
GTEX-139YR-2226-SM-5IFFW 25.4
GTEX-WEY5-1526-SM-4LMJF 25.1
GTEX-12WSK-1526-SM-5CVNO 23.9
GTEX-WFG8-1626-SM-4LVMB 22.8
GTEX-13O21-1026-SM-5IJDU 22.0
GTEX-ZXES-1526-SM-5NQ95 20.3
GTEX-145ME-0926-SM-5O9AR 20.0
GTEX-ZQG8-2526-SM-57WEQ 18.8
GTEX-XBED-1426-SM-4AT4G 17.0
GTEX-UPK5-2026-SM-4JBIM 15.5
GTEX-WQUQ-2426-SM-4MVNW 15.5
GTEX-ZA64-1226-SM-5HL7B 15.4
GTEX-Y114-1426-SM-4TT6W 14.9
GTEX-13PL7-2626-SM-5IFH4 14.1
GTEX-139T6-1026-SM-5IJGC 14.0
GTEX-WFG7-1726-SM-4LVME 12.6
GTEX-ZVT2-2126-SM-5NQ93 12.6
GTEX-1399R-2026-SM-5K7WN 12.3
GTEX-ZPCL-1726-SM-57WEO 12.1
GTEX-XUZC-1426-SM-4BRV3 12.0
GTEX-ZTPG-2626-SM-57WFX 11.8
GTEX-YEC4-1726-SM-4W21E 11.0
GTEX-XXEK-1026-SM-4BRUW 10.7
GTEX-ZLV1-1126-SM-4WWBW 10.3
GTEX-ZTX8-0526-SM-59HLD 10.1
GTEX-VUSG-1726-SM-4KKZL 9.4
GTEX-ZYWO-1526-SM-5SIAL 8.5
GTEX-ZC5H-2326-SM-4WAYT 8.4
GTEX-14DAR-1426-SM-5RQIR 7.9
GTEX-131XF-1326-SM-5GCMQ 7.8
GTEX-YB5E-1526-SM-5IFIE 7.6
GTEX-X15G-1426-SM-4PQZK 7.3
GTEX-11EQ9-1326-SM-5985X 7.0
GTEX-ZP4G-1626-SM-57WGD 6.5
GTEX-11XUK-1426-SM-5EQMG 6.4
GTEX-ZTSS-0926-SM-59865 6.1
GTEX-XAJ8-0526-SM-47JYK 6.1
GTEX-ZYFG-2026-SM-5E43Y 5.9
GTEX-11DXZ-1326-SM-5H11X 5.7
GTEX-VJYA-0926-SM-4KL1N 5.5
GTEX-ZVZP-1826-SM-5GZXB 5.3
GTEX-11P7K-1626-SM-5GU63 5.3
GTEX-Z9EW-0926-SM-5CVMM 5.0
GTEX-XGQ4-1326-SM-4GIDU 4.8
GTEX-1122O-1326-SM-5H11F 4.8
GTEX-ZLFU-1526-SM-4WWBT 4.7
GTEX-YF7O-1826-SM-5IFIU 4.7
GTEX-13FTW-2026-SM-5IJE2 4.5
GTEX-WRHK-1026-SM-4MVOD 4.3
GTEX-11NSD-1726-SM-5N9C3 4.3
GTEX-148VJ-2226-SM-5NQ9M 3.9
GTEX-X5EB-1626-SM-4E3IV 3.8
GTEX-133LE-1426-SM-5IFH1 3.8
GTEX-11I78-1126-SM-5A5K5 3.5
GTEX-145LT-1026-SM-5LU9O 3.5
GTEX-ZEX8-1826-SM-57WBH 3.3
GTEX-13113-1226-SM-5EGHT 3.1
GTEX-ZVP2-1726-SM-5GU5P 3.1
GTEX-WFJO-0926-SM-4LVM2 3.0
GTEX-12BJ1-1926-SM-5HL9Z 2.9
GTEX-13D11-0726-SM-5LZZB 2.8
GTEX-Y9LG-1626-SM-5IFHM 2.6
GTEX-11DXX-1626-SM-5H11H 2.4
GTEX-13FH7-1226-SM-5IJFK 2.4
GTEX-1399S-2026-SM-5KM4B 2.0
GTEX-13CF3-1226-SM-5LZXN 2.0
GTEX-14E6E-1626-SM-5RQI7 1.8
GTEX-11VI4-1626-SM-5EQKO 1.7
GTEX-13O61-1326-SM-5KM31 1.6
GTEX-ZZ64-0526-SM-5GZXM 1.5
GTEX-11P82-0826-SM-5P9GU 1.5
GTEX-WH7G-1626-SM-4LVMY 1.4
GTEX-1399U-2126-SM-5IFEZ 1.4
GTEX-111YS-1426-SM-5GID8 1.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

73.8

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 73.8
FF:10024-101D6 15,40,85 years, mixed 73.8

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