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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:7.6TPM
GTEx:6.3RPKM
FANTOM5:30.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA001200

 

Antibody HPA018530

 

Antibody CAB000035

 

Antibody CAB068186

 

Antibody CAB073534

 

Glandular cells

Not detected   Medium   Low   Not detected   Low  
         
         
         

SMALL INTESTINE - HPA RNA-seq

Average TPM

7.6

overview Male, age 65
Sample 1
TPM: 5.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 7.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 9.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 8.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

6.3

GTEx sample id

RPKM

4.76.07.72.011.90123456789101112
 
4.76.07.72.011.90123456789101112

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 6.3
Samples: 88

Max RPKM: 12.4
Min RPKM: 2
Std RPKM: 2.3
Median RPKM: 6.1
GTEX-13O21-1026-SM-5IJDU 12.4
GTEX-12WSK-1526-SM-5CVNO 12.3
GTEX-ZQUD-0926-SM-57WE3 11.9
GTEX-145ME-0926-SM-5O9AR 11.4
GTEX-117YX-0326-SM-5GICL 10.8
GTEX-13OVI-1926-SM-5IJCG 10.6
GTEX-Y114-1426-SM-4TT6W 10.1
GTEX-ZF2S-1726-SM-57WFT 9.9
GTEX-111CU-1326-SM-5NQ8L 9.3
GTEX-WFG7-1726-SM-4LVME 9.2
GTEX-XBED-1426-SM-4AT4G 9.2
GTEX-ZTX8-0526-SM-59HLD 9.0
GTEX-13113-1226-SM-5EGHT 8.8
GTEX-13RTK-0826-SM-5Q5C6 8.6
GTEX-ZQG8-2526-SM-57WEQ 8.5
GTEX-148VJ-2226-SM-5NQ9M 8.5
GTEX-ZXES-1526-SM-5NQ95 8.4
GTEX-11P7K-1626-SM-5GU63 8.3
GTEX-ZPIC-2326-SM-57WDW 8.2
GTEX-13QBU-1926-SM-5IJEW 8.0
GTEX-ZP4G-1626-SM-57WGD 7.9
GTEX-139T6-1026-SM-5IJGC 7.8
GTEX-1399S-2026-SM-5KM4B 7.7
GTEX-ZVT2-2126-SM-5NQ93 7.6
GTEX-ZVZP-1826-SM-5GZXB 7.5
GTEX-14DAR-1426-SM-5RQIR 7.4
GTEX-ZTSS-0926-SM-59865 7.3
GTEX-ZLFU-1526-SM-4WWBT 7.2
GTEX-Y9LG-1626-SM-5IFHM 7.1
GTEX-13PL7-2626-SM-5IFH4 7.0
GTEX-XAJ8-0526-SM-47JYK 6.9
GTEX-111YS-1426-SM-5GID8 6.8
GTEX-145LT-1026-SM-5LU9O 6.7
GTEX-139YR-2226-SM-5IFFW 6.7
GTEX-YF7O-1826-SM-5IFIU 6.7
GTEX-ZLV1-1126-SM-4WWBW 6.7
GTEX-WEY5-1526-SM-4LMJF 6.6
GTEX-1192X-2526-SM-59868 6.6
GTEX-ZPCL-1726-SM-57WEO 6.4
GTEX-Y5LM-1626-SM-4VDTB 6.4
GTEX-131XG-1726-SM-5LZUR 6.3
GTEX-13D11-0726-SM-5LZZB 6.3
GTEX-YEC4-1726-SM-4W21E 6.2
GTEX-WFG8-1626-SM-4LVMB 6.1
GTEX-13111-1426-SM-5DUW3 6.0
GTEX-Y3IK-1726-SM-4YCCR 6.0
GTEX-ZZ64-0526-SM-5GZXM 5.9
GTEX-YB5E-1526-SM-5IFIE 5.9
GTEX-XMK1-1826-SM-4B66F 5.8
GTEX-131XF-1326-SM-5GCMQ 5.7
GTEX-13FTW-2026-SM-5IJE2 5.7
GTEX-1122O-1326-SM-5H11F 5.7
GTEX-11EQ9-1326-SM-5985X 5.6
GTEX-1399U-2126-SM-5IFEZ 5.6
GTEX-11XUK-1426-SM-5EQMG 5.5
GTEX-X5EB-1626-SM-4E3IV 5.4
GTEX-XUZC-1426-SM-4BRV3 5.2
GTEX-11I78-1126-SM-5A5K5 5.2
GTEX-ZYWO-1526-SM-5SIAL 5.1
GTEX-133LE-1426-SM-5IFH1 4.9
GTEX-11DXX-1626-SM-5H11H 4.9
GTEX-ZYFG-2026-SM-5E43Y 4.8
GTEX-ZVP2-1726-SM-5GU5P 4.8
GTEX-XGQ4-1326-SM-4GIDU 4.7
GTEX-WFJO-0926-SM-4LVM2 4.7
GTEX-13CF3-1226-SM-5LZXN 4.7
GTEX-12BJ1-1926-SM-5HL9Z 4.6
GTEX-ZA64-1226-SM-5HL7B 4.4
GTEX-WH7G-1626-SM-4LVMY 4.4
GTEX-11DXZ-1326-SM-5H11X 4.4
GTEX-WQUQ-2426-SM-4MVNW 4.4
GTEX-ZC5H-2326-SM-4WAYT 4.3
GTEX-XXEK-1026-SM-4BRUW 4.2
GTEX-WRHK-1026-SM-4MVOD 4.2
GTEX-13FH7-1226-SM-5IJFK 4.1
GTEX-ZTPG-2626-SM-57WFX 4.0
GTEX-13O61-1326-SM-5KM31 3.9
GTEX-14E6E-1626-SM-5RQI7 3.8
GTEX-Z9EW-0926-SM-5CVMM 3.7
GTEX-11VI4-1626-SM-5EQKO 3.4
GTEX-X15G-1426-SM-4PQZK 3.4
GTEX-1399R-2026-SM-5K7WN 3.2
GTEX-ZEX8-1826-SM-57WBH 3.1
GTEX-11P82-0826-SM-5P9GU 2.8
GTEX-VUSG-1726-SM-4KKZL 2.8
GTEX-11NSD-1726-SM-5N9C3 2.7
GTEX-VJYA-0926-SM-4KL1N 2.6
GTEX-UPK5-2026-SM-4JBIM 2.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

30.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 30.9
FF:10024-101D6 15,40,85 years, mixed 30.9

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The Human Protein Atlas project is funded
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