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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA019356

 

Antibody HPA029461

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA019356   HPA029461  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

   

Released in version

5   6  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA019356

 

Antibody HPA029461

 
Immunocytochemistry

Supported    
Immunohistochemistry

Approved   Approved  
Western blot

Supported   Uncertain  
Protein array

Supported   Supported  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA019356

 

Antibody HPA029461

 

Standard validation

Supported    

   

Figure description

Immunofluorescent staining of human cell line A-431 shows localization to cytosol.    

Antibody dilution

1:102    

Literature conformity

The subcellular location is supported by literature.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA019356

 

Antibody HPA029461

 

Standard validation

Approved   Approved  

   

Figure description

Immunohistochemical staining of human bone marrow shows distinct cytoplasmic positivity in hematopoietic cells.   Immunohistochemical staining of human bone marrow shows strong cytoplasmic and nuclear positivity in bone marrow poietic cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 79 cell types
  RNA: detected in 37 tissues
Protein: detected in 71 cell types
 

Retrieval

HIER pH6   HIER pH6  

Antibody dilution

1:200   1:275  

Literature conformity

No avaliable gene/protein characterization data.   No avaliable gene/protein characterization data.  

RNA consistency

Mainly consistent with RNA expression data.   Mainly consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA019356

 

Antibody HPA029461

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Uncertain

Analysis performed using a standard panel of samples.
No bands detected.
 

   

Figure description

Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

57.5, 54.2, 34.2, 23.4   57.5, 54.2  

Antibody dilution

1:250   1:250  

PROTEIN ARRAY

 
 

Antibody HPA019356

 

Antibody HPA029461

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
 

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:3000  

ANTIGEN INFORMATION

 
 

Antibody HPA019356

 

Antibody HPA029461

 

Antigen

Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

108   105  

Antigen sequence

KSQRNLVAKMKKVMHLQDVEVKNATQWKDKIKSQRMRISTEFSKLHNFLV
EEEDLFLQRLNKEEEETKKKLNENTLKLNQTIASLKKLILEVGEKSQAPT
LELLQNPK
 
VAVGVCREDVMGITDRSKMSPDVGIWAIYWSAAGYWPLIGFPGTPTQQEP
ALHRVGVYLDRGTGNVSFYSAVDGVHLHTFSCSSVSRLRPFFWLSPLASL
VIPPV
 

Matching transcripts

TRIM4-001 - ENSP00000275736 [100%]
TRIM4-002 - ENSP00000396229 [100%]
TRIM4-004 - ENSP00000348216 [100%]
TRIM4-005 - ENSP00000346186 [100%]
  TRIM4-001 - ENSP00000275736 [100%]
TRIM4-004 - ENSP00000348216 [100%]
 

Other gene match

   
ANTIGEN VIEW
TRIM4-001
TRIM4-002
TRIM4-004
TRIM4-005
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.