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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:22.8TPM
GTEx:16.4RPKM
FANTOM5:29.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Chondrocytes:High
Fibroblasts:Low
 

Antibody staining

Antibody HPA051587

  

Antibody CAB026384

  

Adipocytes

 Low   Medium  

Chondrocytes

 High   High  

Fibroblasts

 Medium   Low  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA051587

  

Antibody CAB026384

  

Adipocytes

 High   Medium  

Fibroblasts

 Medium   Low  

Peripheral nerve

 Low   Medium  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

22.8
N/A Female, age 80
Sample 1
TPM: 30.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 15.9
N/A Female, age 57
Sample 3
TPM: 16.6
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 24.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 26.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

16.4

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 16.7
Samples: 350

Max RPKM: 32.2
Min RPKM: 7.9
Std RPKM: 3.8
Median RPKM: 16.5
GTEX-X5EB-2426-SM-4E3HX 32.2
GTEX-11EMC-2826-SM-5PNY6 27.7
GTEX-RVPU-2326-SM-2TF6R 26.8
GTEX-X638-0226-SM-47JZ9 26.2
GTEX-P4QT-0226-SM-3LK68 26.1
GTEX-XMK1-2226-SM-4B673 25.9
GTEX-139TU-0226-SM-5J1NM 25.7
GTEX-YEC4-2426-SM-57WFO 24.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 15.9
Samples: 227

Max RPKM: 33.8
Min RPKM: 6.1
Std RPKM: 4.1
Median RPKM: 15.3
GTEX-WYVS-0626-SM-4SOJY 33.8
GTEX-ZG7Y-1626-SM-5S2NO 32.2
GTEX-13OVL-0826-SM-5L3GV 26.8
GTEX-WFON-1226-SM-3TW8F 26.7
GTEX-13VXT-0926-SM-5LU5K 26.3
GTEX-X3Y1-0926-SM-3P5YT 26.3
GTEX-XXEK-1426-SM-4BRW1 25.0
GTEX-Y5V6-0626-SM-4WWFY 24.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

29.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 29.1
FF:10010-101C1 65,65,76 years, mixed 29.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.