We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
MEPCE
  • premium

    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:52.2TPM
GTEx:38.5RPKM
FANTOM5:40.5Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Medium
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA051587

 

Antibody CAB026384

 

Cells in red pulp

High   Medium  

Cells in white pulp

High   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

52.2

overview Female, age 60
Sample 1
TPM: 49.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 68.1
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 46.8
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 52.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 43.7
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

38.5

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 38.5
Samples: 104

Max RPKM: 66.5
Min RPKM: 20.2
Std RPKM: 7.5
Median RPKM: 37.5
GTEX-S3XE-0626-SM-4AD6B 66.5
GTEX-RUSQ-0126-SM-47JWV 57.4
GTEX-14E6E-1226-SM-5S2R5 55.6
GTEX-R55G-0226-SM-48FEI 52.1
GTEX-1211K-0426-SM-5FQTP 50.5
GTEX-X585-1826-SM-4QAS3 49.5
GTEX-OIZH-0926-SM-48TBR 49.3
GTEX-S4Z8-0226-SM-4AD5K 49.2
GTEX-13PVR-0326-SM-5RQJY 49.0
GTEX-12BJ1-0726-SM-5EGGF 48.3
GTEX-P4QS-0926-SM-48TBS 48.3
GTEX-139T6-0226-SM-5IFGZ 47.9
GTEX-XXEK-0126-SM-4BRVU 47.7
GTEX-132QS-0226-SM-5IFFZ 46.7
GTEX-12WSJ-0526-SM-5GCOZ 46.6
GTEX-X4LF-0226-SM-4QAS8 46.4
GTEX-13VXT-1326-SM-5LU3Y 46.0
GTEX-QDVN-0526-SM-48TZ4 45.6
GTEX-ZYFG-0726-SM-5GIDX 45.6
GTEX-11NSD-0426-SM-5N9CR 45.5
GTEX-ZVZP-0726-SM-59HKA 45.2
GTEX-QV31-0126-SM-447BP 45.1
GTEX-13S86-0126-SM-5S2PI 44.4
GTEX-ZPU1-1026-SM-4YCEQ 44.0
GTEX-117YX-2126-SM-5GIEL 43.7
GTEX-W5WG-0626-SM-4SOID 43.0
GTEX-T5JW-0126-SM-4DM6K 42.7
GTEX-XQ8I-1726-SM-4BOQB 42.4
GTEX-131XE-1126-SM-5EGHW 42.3
GTEX-UJHI-0126-SM-4IHLP 42.0
GTEX-1122O-0526-SM-5N9DM 41.9
GTEX-X3Y1-0126-SM-4PQZA 41.9
GTEX-144GN-2126-SM-5O99D 41.8
GTEX-1399S-0226-SM-5IFFG 41.6
GTEX-U3ZH-0126-SM-4DXUK 41.5
GTEX-WHWD-0126-SM-4OORS 41.4
GTEX-YB5K-1926-SM-4VDT4 41.4
GTEX-ZDTT-1026-SM-5KM19 41.4
GTEX-XGQ4-0126-SM-4AT4H 41.1
GTEX-XV7Q-0126-SM-4BRVK 41.1
GTEX-YFCO-0926-SM-5LUA5 41.1
GTEX-11XUK-0426-SM-5EQML 39.8
GTEX-ZLFU-0526-SM-4WWBN 39.3
GTEX-13111-0126-SM-5EGHO 39.1
GTEX-Q2AH-0226-SM-48U1I 38.8
GTEX-13FH7-1326-SM-5IFG8 38.5
GTEX-PLZ6-0126-SM-48TC6 38.4
GTEX-WFON-0126-SM-4LVM9 38.3
GTEX-YEC4-0126-SM-4W21T 38.2
GTEX-Q734-0226-SM-48U1A 37.8
GTEX-O5YT-0926-SM-48TDG 37.7
GTEX-QLQW-0126-SM-447BK 37.6
GTEX-XMK1-0126-SM-4B65F 37.3
GTEX-13X6H-0726-SM-5Q5BX 37.2
GTEX-XUJ4-0226-SM-4BOP8 36.6
GTEX-11DXX-0726-SM-5H12X 36.2
GTEX-11EQ9-0426-SM-5A5JY 36.2
GTEX-147F3-0126-SM-5NQBJ 36.1
GTEX-Z9EW-0726-SM-5HL9H 36.1
GTEX-14DAR-0326-SM-5S2PS 35.9
GTEX-QCQG-0226-SM-48U28 35.9
GTEX-YB5E-0426-SM-5IFHR 35.9
GTEX-XPVG-0626-SM-4B65B 35.7
GTEX-ZYWO-0226-SM-5GZX3 35.6
GTEX-QV44-0126-SM-4R1KH 35.2
GTEX-UPK5-1626-SM-4JBHI 35.2
GTEX-11LCK-0126-SM-5A5M5 34.9
GTEX-12WSN-0126-SM-5DUX5 34.9
GTEX-131XG-0426-SM-5IFGD 34.9
GTEX-U4B1-0526-SM-4DXTK 34.9
GTEX-ZVP2-0526-SM-51MSC 34.9
GTEX-13PL7-1126-SM-5MR5O 34.8
GTEX-PW2O-0126-SM-48TC8 34.8
GTEX-Y5LM-0326-SM-4VBRN 34.8
GTEX-P4PP-0926-SM-48TBZ 34.7
GTEX-146FR-1926-SM-5NQA6 34.4
GTEX-ZV6S-0826-SM-5NQ6Z 33.7
GTEX-U3ZN-0126-SM-4DXUM 33.5
GTEX-Y114-0726-SM-4TT6U 33.5
GTEX-OOBJ-0926-SM-48TDO 33.3
GTEX-QMRM-0226-SM-4R1K7 33.3
GTEX-Y3I4-0126-SM-4TT26 33.3
GTEX-146FQ-0626-SM-5LU9U 33.0
GTEX-PX3G-0926-SM-48U12 32.8
GTEX-XAJ8-0126-SM-47JYG 32.8
GTEX-11VI4-0126-SM-5GU6Z 32.7
GTEX-13CF3-0226-SM-5J1NW 32.4
GTEX-VJYA-0126-SM-4KL1P 32.4
GTEX-13N11-0126-SM-5KM2Z 32.3
GTEX-POMQ-0126-SM-48TD6 32.1
GTEX-12WSG-0926-SM-5EGIH 31.7
GTEX-145MN-0126-SM-5RQHY 31.4
GTEX-Y8LW-0126-SM-4VBS1 30.7
GTEX-11P81-1326-SM-5GU5S 30.3
GTEX-1399R-0226-SM-5IJGG 30.2
GTEX-ZP4G-0326-SM-4YCEF 29.0
GTEX-11P7K-0426-SM-5BC5H 28.0
GTEX-ZAB5-0526-SM-5CVMU 27.7
GTEX-ZLWG-0426-SM-4WWFA 27.7
GTEX-12WSK-0126-SM-5GCO7 26.9
GTEX-ZZPU-0126-SM-5E446 23.9
GTEX-13U4I-1626-SM-5IFFR 22.9
GTEX-Y3IK-0126-SM-4WWE9 22.0
GTEX-139YR-0426-SM-5IFFV 20.2
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

40.5

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 40.5
FF:10025-101D7 39,50,70 years, male 40.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.