We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SH3KBP1
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:7.8RPKM
FANTOM5:38.0Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Low
 

Antibody staining

Antibody HPA003351

 

Antibody HPA003355

 

Antibody CAB021892

 

Glial cells

Medium   Medium   Not detected  

Neuronal cells

Not detected   Medium   Low  
     
     
     

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

7.8

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 7.8
Samples: 94

Max RPKM: 15.5
Min RPKM: 1.8
Std RPKM: 2.5
Median RPKM: 7.8
GTEX-13JUV-0011-R1a-SM-5LZY4 15.5
GTEX-RNOR-0011-R1A-SM-5SI8F 13.6
GTEX-R55E-0011-R1A-SM-2TC6N 11.7
GTEX-13FLW-0011-R1b-SM-5LZX2 11.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 11.4
GTEX-T6MN-0011-R1A-SM-32QOY 11.4
GTEX-ZAB4-0011-R1a-SM-4RGNO 11.4
GTEX-145MH-0011-R1b-SM-5PNWY 11.2
GTEX-WL46-0011-R1A-SM-3LK6M 11.1
GTEX-UTHO-0011-R1A-SM-3GIJO 11.1
GTEX-X4XX-0011-R1B-SM-3P622 10.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 10.9
GTEX-WZTO-0011-R1B-SM-3NMAR 10.8
GTEX-X585-0011-R1B-SM-46MVE 10.6
GTEX-PVOW-0011-R1A-SM-32PL6 10.6
GTEX-13X6I-0011-R1b-SM-5PNZC 10.3
GTEX-P44H-0011-R1A-SM-3NM8J 10.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 10.2
GTEX-N7MS-0011-R1a-SM-2HMJG 10.2
GTEX-13OW6-0011-R1a-SM-5L3HQ 10.1
GTEX-N7MT-0011-R1a-SM-5SI7S 9.9
GTEX-QVJO-0011-R1A-SM-2S1QI 9.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 9.7
GTEX-WWYW-0011-R1A-SM-3TW8G 9.7
GTEX-139TT-0011-R1a-SM-5LZVD 9.6
GTEX-13O3O-0011-R1b-SM-5KM2K 9.5
GTEX-YFC4-0011-R1a-SM-4V6EH 9.5
GTEX-13G51-0011-R1a-SM-5LZYR 9.4
GTEX-1313W-0011-R1b-SM-5EQ4A 9.3
GTEX-145LS-0011-R1b-SM-5PNUP 9.2
GTEX-13OW5-0011-R1b-SM-5L3GE 9.1
GTEX-13S7M-0011-R1b-SM-5PNZE 8.9
GTEX-12WSH-0011-R1a-SM-5GU5V 8.9
GTEX-12WSF-0011-R1a-SM-5DUVI 8.7
GTEX-13QJC-0011-R1b-SM-5S2UU 8.7
GTEX-NPJ8-0011-R1a-SM-33HCB 8.7
GTEX-QVUS-0011-R1A-SM-3GAD2 8.6
GTEX-XOTO-0011-R1B-SM-4B65C 8.5
GTEX-QDT8-0011-R1A-SM-32PKS 8.4
GTEX-14ASI-0011-R1b-SM-5S2TY 8.3
GTEX-13N2G-0011-R1b-SM-5MR3G 8.3
GTEX-131YS-0011-R1a-SM-5DUXC 8.2
GTEX-13OVL-0011-R1a-SM-5L3H5 8.1
GTEX-ZUA1-0011-R1a-SM-4YCE2 8.1
GTEX-13N1W-0011-R1b-SM-5MR4T 8.0
GTEX-TSE9-0011-R1A-SM-3DB7E 7.9
GTEX-13FXS-0011-R1a-SM-5K7U6 7.8
GTEX-11UD1-0011-R1b-SM-5BC7D 7.8
GTEX-12WSE-0011-R1b-SM-5GU4V 7.7
GTEX-13112-0011-R1b-SM-5HL7K 7.7
GTEX-13NYB-0011-R1b-SM-5KM4F 7.5
GTEX-T5JC-0011-R1A-SM-32PM6 7.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 7.5
GTEX-131XH-0011-R1a-SM-5DUWA 7.5
GTEX-11GSO-0011-R1b-SM-57WD3 7.4
GTEX-12WSD-0011-R1b-SM-5LZVY 7.4
GTEX-12WSM-0011-R1a-SM-5LZW6 7.4
GTEX-XMD1-0011-R1A-SM-4AT4C 7.4
GTEX-PWO3-0011-R1A-SM-2I5EW 7.3
GTEX-132Q8-0011-R1a-SM-5EGLK 7.1
GTEX-1399T-0011-R1b-SM-5DUWN 7.0
GTEX-11ZTS-0011-R1a-SM-5BC71 6.8
GTEX-QMR6-0011-R1A-SM-32PKW 6.8
GTEX-NL3H-0011-R1a-SM-48TDJ 6.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 6.8
GTEX-13NYS-0011-R1b-SM-5MR55 6.6
GTEX-13JVG-0011-R1a-SM-5KM32 6.3
GTEX-1212Z-0011-R1b-SM-5BC72 6.3
GTEX-NPJ7-0011-R1a-SM-3GACT 6.2
GTEX-12WSB-0011-R1b-SM-5P9EY 6.1
GTEX-13NZA-0011-R1b-SM-5LUAF 5.9
GTEX-13FHO-0011-R1b-SM-5KLZG 5.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 5.7
GTEX-144GL-0011-R1a-SM-5PNZ5 5.5
GTEX-WVLH-0011-R1A-SM-4MVOK 5.5
GTEX-S7SE-0011-R1A-SM-2XCDE 5.2
GTEX-YJ89-0011-R1a-SM-4RGLS 5.2
GTEX-13OW7-0011-R1b-SM-5L3HF 5.2
GTEX-13PDP-0011-R1a-SM-5PNX5 5.0
GTEX-144GO-0011-R1a-SM-5PNWO 4.9
GTEX-13RTL-0011-R1a-SM-5PNZ8 4.9
GTEX-145LU-0011-R1a-SM-5Q5CE 4.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 4.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 4.4
GTEX-11ONC-0011-R1a-SM-57WD4 4.4
GTEX-139T8-0011-R1a-SM-5HL75 4.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 4.3
GTEX-13OW8-0011-R1a-SM-5L3HI 4.2
GTEX-13SLW-0011-R1a-SM-5S2W7 4.1
GTEX-ZF28-0011-R1a-SM-4WWD1 3.5
GTEX-13CF2-0011-R1a-SM-5LZY1 3.2
GTEX-ZE7O-0011-R1a-SM-57WDM 2.2
GTEX-13FTY-0011-R1a-SM-5LZXE 2.1
GTEX-13FHP-0011-R1b-SM-5K7XL 1.8
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

38.0

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 38.0
FF:10153-102I9 76 years, female 63.2
FF:10169-103B7 60 years, female 29.3
FF:10374-105G5 89 years, female 21.4

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.