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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:63.8TPM
GTEx:15.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Low
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA000263

 

Antibody HPA011135

 

Antibody HPA011227

 

Antibody CAB010898

 

Antibody CAB047338

 

Endothelial cells

Medium   Low   Medium   Medium   Medium  

Glial cells

Medium   Not detected   Low   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Neuropil

Medium   Not detected   Not detected   Not detected   Low  
         
         
         

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

63.8

N/A Male, age 5
Sample 1
TPM: 63.0
overview Female, age 40
Sample 2
TPM: 38.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 90.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

15.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 15.1
Samples: 114

Max RPKM: 52.8
Min RPKM: 4.6
Std RPKM: 7.8
Median RPKM: 12.8
GTEX-13OVJ-2826-SM-5L3GW 52.8
GTEX-13JVG-3126-SM-5L3FH 36.9
GTEX-144FL-3026-SM-5O99C 36.8
GTEX-11WQK-3026-SM-5EQL6 36.2
GTEX-X585-3026-SM-46MWF 31.7
GTEX-11OC5-0726-SM-5P9JK 31.0
GTEX-11GSP-3226-SM-5986O 28.1
GTEX-13NYS-3126-SM-5KLYV 27.6
GTEX-132Q8-3026-SM-5PNVG 27.3
GTEX-NPJ8-1526-SM-2D7VU 27.1
GTEX-ZZPT-3026-SM-5GZXH 27.0
GTEX-139T8-1026-SM-5J2MC 26.5
GTEX-13PVQ-3026-SM-5SI93 26.5
GTEX-11TTK-2926-SM-5PNYP 25.2
GTEX-13X6K-2926-SM-5Q5D5 25.2
GTEX-PWO3-0926-SM-2I5EY 24.3
GTEX-1445S-3026-SM-5O9BR 24.2
GTEX-13JUV-2926-SM-5LZX7 24.0
GTEX-NPJ7-2726-SM-2I3FT 23.3
GTEX-13IVO-2926-SM-5L3CZ 21.5
GTEX-13NYC-2826-SM-5K7WR 21.4
GTEX-12WSA-2926-SM-5EQ4D 21.0
GTEX-WHSE-3026-SM-3P5ZH 20.1
GTEX-QVUS-2826-SM-3GADB 19.3
GTEX-12WSD-3126-SM-5HL7P 19.0
GTEX-QVJO-1426-SM-2S1QY 18.5
GTEX-RU72-3026-SM-5SI7Y 18.0
GTEX-11EI6-3026-SM-5GZZO 17.9
GTEX-1399T-3026-SM-5KLZC 17.8
GTEX-11EMC-3226-SM-5EGKW 17.1
GTEX-R55F-1326-SM-5S2V4 17.0
GTEX-131XW-3126-SM-5LZUC 16.7
GTEX-11O72-2926-SM-5BC4V 16.5
GTEX-ZE7O-3126-SM-5HL5X 16.5
GTEX-11ONC-2926-SM-5P9JM 16.3
GTEX-1192X-3126-SM-5N9BY 15.9
GTEX-WZTO-2926-SM-3NM9I 15.9
GTEX-13OW7-3026-SM-5L3GY 15.5
GTEX-13QIC-2926-SM-5J2NF 15.5
GTEX-OXRN-2426-SM-2I5EQ 15.5
GTEX-12ZZZ-3026-SM-5BC67 15.4
GTEX-13FHO-3026-SM-5J1O9 15.0
GTEX-14A5I-2926-SM-5Q5CQ 14.9
GTEX-WWYW-3126-SM-3NB39 14.7
GTEX-13S7M-3126-SM-5RQJQ 14.4
GTEX-ZYFD-3026-SM-5E44C 14.2
GTEX-QMR6-1426-SM-32PLA 14.1
GTEX-12ZZW-2926-SM-5LZUP 13.9
GTEX-ZAJG-3126-SM-5HL9J 13.7
GTEX-N7MT-1126-SM-5SI7V 13.6
GTEX-ZVT3-3026-SM-5E43N 13.6
GTEX-11NUK-2926-SM-5A5MD 13.3
GTEX-145LS-3126-SM-5Q5BY 13.3
GTEX-1128S-2726-SM-5H12C 13.2
GTEX-QDT8-2926-SM-32PKC 13.2
GTEX-147GR-3026-SM-5S2ML 12.9
GTEX-11GSO-2926-SM-5HL73 12.8
GTEX-11DXY-3226-SM-5GIDE 12.7
GTEX-13G51-3026-SM-5IJB8 12.6
GTEX-XLM4-3026-SM-4AT6L 12.6
GTEX-13PL6-3126-SM-5LUAR 12.3
GTEX-13OW8-2826-SM-5L3GC 12.2
GTEX-13X6J-3026-SM-5Q5CU 12.1
GTEX-ZAK1-3026-SM-5S2MJ 12.1
GTEX-13FHP-3026-SM-5IJBS 11.9
GTEX-144GL-3026-SM-5Q5CW 11.7
GTEX-11NV4-2126-SM-5N9DS 11.6
GTEX-1117F-3226-SM-5N9CT 11.5
GTEX-12ZZY-3026-SM-5GCOU 11.4
GTEX-13O3O-3126-SM-5KM3H 11.3
GTEX-Y8DK-0826-SM-4TT3T 11.3
GTEX-Q2AG-2926-SM-2HMJ3 11.2
GTEX-145MF-2726-SM-5O995 11.1
GTEX-11DXW-1126-SM-5H12Q 11.0
GTEX-11PRG-2926-SM-5987A 10.9
GTEX-12WSH-3026-SM-5CVNI 10.9
GTEX-11GS4-3126-SM-5A5LH 10.6
GTEX-13OVH-3026-SM-5MR4N 10.6
GTEX-13OW6-3026-SM-5J2MI 10.6
GTEX-111FC-3126-SM-5GZZ2 10.5
GTEX-13O3Q-2926-SM-5KM45 10.5
GTEX-XOTO-3026-SM-4B65M 10.1
GTEX-14BMV-3026-SM-5S2PQ 10.0
GTEX-12126-1026-SM-5P9JJ 9.9
GTEX-12ZZX-2926-SM-5GCOQ 9.9
GTEX-131YS-3126-SM-5KLYT 9.9
GTEX-14ASI-3026-SM-5S2PN 9.8
GTEX-X4XX-3026-SM-3NMB2 9.8
GTEX-ZUA1-3026-SM-59HJC 9.8
GTEX-12WSC-3026-SM-5GCNF 9.7
GTEX-YJ89-3026-SM-5IFJI 9.7
GTEX-UTHO-3026-SM-3GAFB 9.6
GTEX-Y111-2726-SM-4TT3N 9.6
GTEX-YFC4-3126-SM-5PNV6 9.3
GTEX-145MG-3026-SM-5RQJA 9.2
GTEX-RNOR-2326-SM-2TF4I 9.1
GTEX-TSE9-3026-SM-3DB76 9.1
GTEX-13VXU-2926-SM-5LU5C 9.0
GTEX-13FXS-3126-SM-5J2NN 8.7
GTEX-13NYB-3026-SM-5IJD7 8.3
GTEX-13FLW-1426-SM-5K7YE 7.9
GTEX-145MH-3026-SM-5Q5DZ 7.9
GTEX-117XS-3026-SM-5N9CA 7.8
GTEX-13SLX-3126-SM-5S2Q5 7.8
GTEX-T5JC-2426-SM-3NMDB 7.5
GTEX-T2IS-3026-SM-32QPM 7.2
GTEX-T6MN-2626-SM-32PMQ 7.1
GTEX-1313W-3126-SM-5LZUI 6.2
GTEX-WVLH-3026-SM-3MJG9 6.1
GTEX-11ZUS-2926-SM-5FQSL 6.0
GTEX-WL46-2926-SM-3LK82 6.0
GTEX-PVOW-2526-SM-2XCF7 5.8
GTEX-Z93S-2926-SM-57WB9 5.7
GTEX-11OF3-2926-SM-5HL78 4.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 15.0
Samples: 108

Max RPKM: 70.8
Min RPKM: 3.5
Std RPKM: 10.2
Median RPKM: 12.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 70.8
GTEX-13N2G-0011-R10a-SM-5MR34 67.6
GTEX-QVUS-0011-R10A-SM-3GIK3 35.9
GTEX-11WQK-0011-R10a-SM-5BC6R 35.8
GTEX-NL4W-0011-R10A-SM-2I3DY 35.5
GTEX-11ZUS-0011-R10b-SM-5BC79 33.4
GTEX-X4EP-0011-R10B-SM-4QASJ 32.2
GTEX-1445S-0011-R10a-SM-5PNWB 29.9
GTEX-XMD1-0011-R10A-SM-4AT4A 27.5
GTEX-13JVG-0011-R10b-SM-5KM2P 27.3
GTEX-13QJC-0011-R10a-SM-5SI63 27.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 25.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 22.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 22.7
GTEX-X261-0011-R10B-SM-4E3JT 22.1
GTEX-12WSA-0011-R10b-SM-5P9ET 21.9
GTEX-13FHO-0011-R10b-SM-5J2MM 20.8
GTEX-13X6I-0011-R10a-SM-5PNWI 20.1
GTEX-13JUV-0011-R10b-SM-5LZXR 19.6
GTEX-XLM4-0011-R10A-SM-4AT5P 19.2
GTEX-13OW8-0011-R10a-SM-5L3H6 19.0
GTEX-13NYS-0011-R10a-SM-5MR4S 18.4
GTEX-13X6K-0011-R10a-SM-5P9JR 18.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 18.0
GTEX-X585-0011-R10A-SM-46MUY 18.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 17.8
GTEX-11H98-0011-R10b-SM-5NQ98 17.7
GTEX-1477Z-0011-R10b-SM-5S2RF 17.7
GTEX-OXRO-0011-R10A-SM-2I5EH 17.3
GTEX-P44H-0011-R10A-SM-2XCEK 16.9
GTEX-14753-0011-R10b-SM-5S2WE 16.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 16.5
GTEX-13SLW-0011-R10a-SM-5S2UI 16.3
GTEX-ZV68-0011-R10a-SM-51MT7 16.3
GTEX-14BIL-0011-R10a-SM-5SI75 15.9
GTEX-147F4-0011-R10b-SM-5S2WC 15.7
GTEX-TSE9-0011-R10A-SM-3DB7O 15.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 15.4
GTEX-11WQC-0011-R10a-SM-57WCT 15.0
GTEX-ZAB4-0011-R10a-SM-4SOKH 14.8
GTEX-T5JC-0011-R10A-SM-32PM2 14.7
GTEX-N7MT-0011-R10A-SM-2I3E1 14.6
GTEX-QMR6-0011-R10A-SM-32PKO 14.6
GTEX-13N1W-0011-R10b-SM-5MR4H 14.0
GTEX-OXRN-0011-R10A-SM-2I5GC 14.0
GTEX-145LU-0011-R10a-SM-5PNWJ 13.9
GTEX-13OVL-0011-R10a-SM-5L3GS 13.8
GTEX-13NZA-0011-R10b-SM-5KM54 13.7
GTEX-13IVO-0011-R10a-SM-5LZY3 13.4
GTEX-ZDXO-0011-R10a-SM-4WWD8 13.4
GTEX-139TS-0011-R10a-SM-5K7TU 13.3
GTEX-QDT8-0011-R10A-SM-32PKG 12.8
GTEX-RVPU-0011-R10A-SM-2XCAH 12.5
GTEX-WWYW-0011-R10A-SM-3NB35 12.5
GTEX-13OW6-0011-R10a-SM-5L3HE 12.4
GTEX-ZUA1-0011-R10a-SM-51MT6 12.2
GTEX-ZXG5-0011-R10a-SM-57WDD 12.2
GTEX-131XW-0011-R10a-SM-5DUVA 12.1
GTEX-13G51-0011-R10b-SM-5LZYF 12.0
GTEX-145LS-0011-R10a-SM-5PNUQ 11.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 11.8
GTEX-ZVT3-0011-R10b-SM-57WB6 11.8
GTEX-12ZZW-0011-R10b-SM-5HL9X 11.6
GTEX-ZF28-0011-R10a-SM-4WWEH 11.6
GTEX-N7MS-0011-R10A-SM-2HMJK 11.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 10.9
GTEX-13CZV-0011-R10b-SM-5LZYD 10.8
GTEX-12WSD-0011-R10b-SM-5GU79 10.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 10.7
GTEX-12WSM-0011-R10a-SM-5DUWV 10.4
GTEX-13FXS-0011-R10a-SM-5J2MA 10.0
GTEX-13QIC-0011-R10a-SM-5O9C7 10.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC 9.9
GTEX-131YS-0011-R10b-SM-5EQ5N 9.9
GTEX-13S7M-0011-R10b-SM-5PNZB 9.9
GTEX-147GR-0011-R10b-SM-5S2UM 9.7
GTEX-13NYB-0011-R10a-SM-5KM43 9.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 9.3
GTEX-X4XX-0011-R10B-SM-46MWO 8.8
GTEX-12WSF-0011-R10a-SM-5LZVH 8.7
GTEX-12WSH-0011-R10a-SM-5LZUS 8.6
GTEX-YJ89-0011-R10a-SM-4SOK9 8.6
GTEX-S7SE-0011-R10A-SM-2XCDF 8.4
GTEX-12126-0011-R10b-SM-5BC6T 8.2
GTEX-145MG-0011-R10a-SM-5PNWG 8.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 8.2
GTEX-13FLW-0011-R10b-SM-5LZZF 8.1
GTEX-13O3O-0011-R10a-SM-5LUA9 8.0
GTEX-13O3Q-0011-R10b-SM-5KM39 7.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 7.7
GTEX-131XH-0011-R10a-SM-5EGLJ 7.6
GTEX-13OW7-0011-R10a-SM-5L3H3 7.6
GTEX-YFC4-0011-R10a-SM-4SOK5 7.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 7.1
GTEX-13X6J-0011-R10b-SM-5PNWA 7.0
GTEX-WZTO-0011-R10B-SM-4E3KB 6.9
GTEX-Z93S-0011-R10a-SM-4RGNM 6.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 6.5
GTEX-12WSC-0011-R10a-SM-5GU57 6.4
GTEX-14BIN-0011-R10a-SM-5S2UA 6.1
GTEX-NL3H-0011-R10A-SM-2I3E9 6.1
GTEX-WL46-0011-R10A-SM-3MJFQ 5.7
GTEX-145MH-0011-R10b-SM-5PNUK 5.5
GTEX-WVLH-0011-R10A-SM-3MJFM 5.3
GTEX-13SLX-0011-R10a-SM-5P9HV 5.1
GTEX-T6MN-0011-R10A-SM-32QP7 4.9
GTEX-1313W-0011-R10b-SM-5DUXA 4.4
GTEX-12WSE-0011-R10b-SM-5P9JV 3.5
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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