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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:6.6TPM
GTEx:23.2RPKM
FANTOM5:14.7Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Not detected
Peripheral nerve:Not detected
Adipocytes:Not detected
Chondrocytes:Not available
 
 

Antibody staining

Antibody HPA023739

  

Antibody HPA024017

  

Antibody CAB068206

  

Antibody CAB068207

  

Fibroblasts

 Not detected   Not detected   Low   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected   Not detected  

Adipocytes

 Not detected   Low  

Chondrocytes

 Low   Not detected  
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not available
 
 

Antibody staining

Antibody HPA023739

  

Antibody HPA024017

  

Antibody CAB068206

  

Antibody CAB068207

  

Adipocytes

 Medium   Not detected   Low   Not detected  

Fibroblasts

 Not detected   Not detected   Low   Not detected  

Peripheral nerve

 Low   Not detected  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

6.6
N/A Female, age 80
Sample 1
TPM: 13.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 2.9
N/A Female, age 57
Sample 3
TPM: 8.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 2.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 5.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

23.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 23.0
Samples: 350

Max RPKM: 46.7
Min RPKM: 6.6
Std RPKM: 6.6
Median RPKM: 22.3
GTEX-XGQ4-2226-SM-4AT4Y 46.7
GTEX-YB5E-2126-SM-5IFI7 45.0
GTEX-13VXT-0226-SM-5LU9Q 43.3
GTEX-SN8G-0226-SM-4DM6B 42.9
GTEX-1399U-2426-SM-5K7XB 41.3
GTEX-P4PP-0226-SM-5S2VR 38.3
GTEX-13O61-2426-SM-5J1NV 38.2
GTEX-ZLWG-2226-SM-5DUWO 38.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 23.6
Samples: 227

Max RPKM: 53.6
Min RPKM: 9.3
Std RPKM: 7.2
Median RPKM: 22.6
GTEX-1339X-0726-SM-5L3FF 53.6
GTEX-Y5LM-0826-SM-4VDSW 51.0
GTEX-1399S-1426-SM-5PNYQ 48.0
GTEX-145LV-1026-SM-5O9AE 47.5
GTEX-ZLWG-0726-SM-5S2NG 45.8
GTEX-1122O-0926-SM-5N9C9 41.8
GTEX-13O21-3126-SM-5J1OI 38.5
GTEX-Y3I4-0726-SM-4TT7M 38.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

14.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 14.7
FF:10010-101C1 65,65,76 years, mixed 14.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.