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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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MSRB2
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:20.2TPM
GTEx:15.6RPKM
FANTOM5:48.1Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA027933

 

Glandular cells

Medium  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

20.2

overview Male, age 62
Sample 1
TPM: 23.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 17.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 14.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 15.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 22.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 18.0
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 19.9
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 16.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 28.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

15.6

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 15.6
Samples: 106

Max RPKM: 40.6
Min RPKM: 10.3
Std RPKM: 4.1
Median RPKM: 14.9
GTEX-13RTJ-2126-SM-5S2PZ 40.6
GTEX-14C5O-2826-SM-5RQI6 29.0
GTEX-13111-1326-SM-5GCNO 25.5
GTEX-11ZUS-2126-SM-5N9E6 23.5
GTEX-WK11-2626-SM-4OOSK 22.7
GTEX-OOBK-2025-SM-3LK5S 21.8
GTEX-XGQ4-1826-SM-4AT6F 21.0
GTEX-1399T-1226-SM-5P9J5 20.9
GTEX-13G51-2326-SM-5LZXV 19.8
GTEX-14E6E-1126-SM-5S2R4 19.8
GTEX-111CU-1526-SM-5N9FS 19.6
GTEX-XQ3S-2526-SM-4BOOG 19.6
GTEX-QEG4-2226-SM-4R1JM 19.3
GTEX-ZTX8-1026-SM-5EGHD 19.1
GTEX-13NYS-1026-SM-5KLZT 19.0
GTEX-146FQ-1726-SM-5QGPX 18.7
GTEX-11EQ9-1726-SM-5HL6U 18.4
GTEX-148VJ-1826-SM-5Q5DV 18.4
GTEX-14BMV-2326-SM-5RQJ4 18.3
GTEX-NPJ8-2426-SM-3MJHL 18.3
GTEX-U412-2026-SM-4DXSI 18.3
GTEX-XPVG-2026-SM-4B65E 18.2
GTEX-13OW8-0426-SM-5J2NR 18.1
GTEX-SJXC-2026-SM-4DM6N 18.1
GTEX-QV44-1526-SM-4R1KI 17.9
GTEX-V955-1826-SM-4JBIL 17.5
GTEX-11OF3-1726-SM-5GU5Q 17.4
GTEX-12696-2226-SM-5EQ65 17.2
GTEX-13O61-1726-SM-5KM46 16.9
GTEX-QV31-1026-SM-4R1K3 16.9
GTEX-RM2N-1126-SM-48FCY 16.9
GTEX-131XF-1926-SM-5DUW4 16.6
GTEX-S95S-1026-SM-4B64M 16.6
GTEX-12BJ1-1226-SM-5LUAE 16.5
GTEX-132NY-2826-SM-5P9G2 16.5
GTEX-SNMC-0926-SM-4DM5U 16.4
GTEX-11TT1-2026-SM-5EQM8 16.3
GTEX-11P82-1126-SM-5BC5K 16.1
GTEX-12ZZZ-2026-SM-5LZWJ 16.1
GTEX-ZY6K-1526-SM-5GZXE 16.1
GTEX-T8EM-1826-SM-4DM7F 15.6
GTEX-U3ZM-0926-SM-4DXSW 15.6
GTEX-XAJ8-0626-SM-47JY4 15.6
GTEX-ZUA1-2826-SM-59HLE 15.6
GTEX-V1D1-1926-SM-4JBGX 15.4
GTEX-XMK1-1026-SM-4B65H 15.4
GTEX-OOBJ-2026-SM-3NB1R 15.2
GTEX-YF7O-1926-SM-4W1YQ 15.2
GTEX-13O21-1126-SM-5N9EV 15.1
GTEX-X5EB-1826-SM-4E3K8 15.1
GTEX-REY6-2126-SM-48FD9 15.0
GTEX-XOTO-2826-SM-4B65I 15.0
GTEX-SNOS-1026-SM-4DM4Y 14.9
GTEX-ZLFU-1726-SM-4WWBU 14.9
GTEX-WH7G-1726-SM-4LVKY 14.8
GTEX-ZTTD-2726-SM-57WFA 14.8
GTEX-S4Q7-1026-SM-4AD75 14.7
GTEX-QLQ7-1326-SM-4R1JY 14.6
GTEX-ZDYS-1226-SM-5IJF3 14.6
GTEX-11O72-2726-SM-5HL6K 14.5
GTEX-139T6-1526-SM-5P9G6 14.5
GTEX-WZTO-0926-SM-4PQZ3 14.5
GTEX-11P7K-0626-SM-5985Z 14.4
GTEX-11DYG-2526-SM-5N9BB 14.3
GTEX-13FTW-1226-SM-5LZZ1 14.3
GTEX-14ABY-0726-SM-5Q5DF 14.3
GTEX-ZVP2-0826-SM-59HJ6 14.2
GTEX-111FC-2026-SM-5GZYO 14.1
GTEX-UTHO-2726-SM-4JBH9 14.0
GTEX-13FXS-2826-SM-5LZYC 13.9
GTEX-Q2AI-1126-SM-48U19 13.9
GTEX-VJYA-1226-SM-3GIJ6 13.9
GTEX-13FHO-2826-SM-5K7ZA 13.8
GTEX-12C56-1326-SM-5FQSV 13.7
GTEX-NFK9-2226-SM-3MJGP 13.7
GTEX-1399R-0526-SM-5IJEF 13.6
GTEX-RWSA-2026-SM-47JX8 13.6
GTEX-PLZ6-1126-SM-3P5ZR 13.5
GTEX-WFG7-1826-SM-3GIL1 13.5
GTEX-13N2G-1826-SM-5KM1I 13.4
GTEX-U8XE-2526-SM-4E3IT 13.3
GTEX-S33H-1826-SM-4AD65 13.2
GTEX-ZT9W-1626-SM-4YCDQ 13.2
GTEX-11NSD-0826-SM-5986S 12.9
GTEX-QMRM-1426-SM-4R1K8 12.8
GTEX-YB5E-1826-SM-5IFI4 12.8
GTEX-ZPU1-2026-SM-57WFI 12.4
GTEX-WFG8-1826-SM-4LVM4 12.3
GTEX-OIZH-2026-SM-3NB1M 12.2
GTEX-111YS-1726-SM-5GIED 12.0
GTEX-145LT-0626-SM-5O99E 11.9
GTEX-WFON-1626-SM-4LVMV 11.8
GTEX-YJ8A-1126-SM-5IFJU 11.6
GTEX-11TUW-2126-SM-5GU7B 11.5
GTEX-132QS-1126-SM-5P9GC 11.5
GTEX-Y9LG-1826-SM-4VBQC 11.5
GTEX-ZZ64-0926-SM-5E44L 11.3
GTEX-U4B1-1426-SM-4DXTX 11.0
GTEX-WOFM-0326-SM-4OOSL 11.0
GTEX-Y8E4-2126-SM-5RQHO 10.8
GTEX-11WQK-2726-SM-5EQMU 10.7
GTEX-145LV-1226-SM-5S2QH 10.7
GTEX-117YX-1526-SM-5H12T 10.6
GTEX-117YW-1426-SM-5EGGO 10.5
GTEX-S3XE-1326-SM-4AD4H 10.4
GTEX-144GM-0826-SM-5O98R 10.3
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

48.1

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 48.1
FF:10022-101D4 73,79,93 years, male 48.1

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