We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SSRP1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.6TPM
GTEx:17.7RPKM
FANTOM5:27.2Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Not detected
 

Antibody staining

Antibody HPA002697

 

Bile duct cells

Not detected  

Hepatocytes

Not detected  
 
 
 

LIVER - HPA RNA-seq

Average TPM

22.6

N/A Female, age 60
Sample 1
TPM: 23.1
overview Male, age 54
Sample 2
TPM: 28.6
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 25.4
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 17.5
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 15.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 22.3
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 24.8
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 18.5
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 21.2
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 28.5
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

17.7

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 17.7
Samples: 119

Max RPKM: 35.2
Min RPKM: 5.9
Std RPKM: 5.3
Median RPKM: 16.5
GTEX-QDVN-0826-SM-48TZ2 35.2
GTEX-YB5E-0326-SM-5IFHU 34.1
GTEX-ZTPG-1426-SM-51MT3 32.2
GTEX-12WSG-0626-SM-5FQTQ 30.9
GTEX-13N11-0926-SM-5IJG2 30.6
GTEX-S32W-1926-SM-4AD63 30.0
GTEX-X4XY-1626-SM-46MVN 29.2
GTEX-146FH-1526-SM-5NQBU 28.7
GTEX-Y5LM-0426-SM-4VBRO 28.6
GTEX-UPIC-0926-SM-4IHLV 28.2
GTEX-13NZ9-1326-SM-5MR3V 27.2
GTEX-14C38-1526-SM-5RQJ7 26.3
GTEX-139YR-0226-SM-5IFEM 23.8
GTEX-1497J-0726-SM-5Q5D1 23.7
GTEX-12696-0826-SM-5EGGE 23.5
GTEX-13PVR-0126-SM-5S2PY 23.0
GTEX-QEL4-1226-SM-447A4 23.0
GTEX-144GM-1326-SM-5LU5E 22.8
GTEX-13FTW-1126-SM-5J2NV 22.3
GTEX-YFC4-1526-SM-5IFJS 22.3
GTEX-131XE-0326-SM-5LZVO 22.2
GTEX-P78B-1326-SM-3P611 22.1
GTEX-YEC4-0826-SM-5P9FV 21.9
GTEX-ZF29-2026-SM-4WWB7 21.7
GTEX-11EQ9-0526-SM-5A5JZ 21.2
GTEX-12WSL-0226-SM-5CVMJ 21.2
GTEX-ZZPU-0426-SM-5GZYH 21.0
GTEX-UTHO-2426-SM-4JBHD 20.9
GTEX-ZPU1-0826-SM-57WG2 20.9
GTEX-R53T-0326-SM-48FEC 20.7
GTEX-14AS3-0126-SM-5Q5F4 20.1
GTEX-WYVS-1926-SM-4PQZ2 19.8
GTEX-WQUQ-1926-SM-4OOSA 19.6
GTEX-13O3O-1826-SM-5IFGW 19.3
GTEX-ZYY3-0626-SM-5NQ6W 19.0
GTEX-13113-1326-SM-5GCOI 18.7
GTEX-U3ZN-0226-SM-3DB8D 18.7
GTEX-X4EO-1126-SM-4QARQ 18.5
GTEX-VUSG-0126-SM-4KL1X 18.3
GTEX-RM2N-1926-SM-48FCU 17.9
GTEX-ZVP2-0626-SM-51MSO 17.9
GTEX-11WQC-0726-SM-5EQMR 17.8
GTEX-S33H-1626-SM-4AD68 17.5
GTEX-S4Z8-0526-SM-4AD4T 17.5
GTEX-132NY-0926-SM-5P9G3 17.4
GTEX-QEG4-1826-SM-4R1JN 17.3
GTEX-QESD-2026-SM-447BI 17.3
GTEX-Q734-0326-SM-48U15 17.2
GTEX-X3Y1-2726-SM-4PQZH 17.2
GTEX-147F4-1426-SM-5LUA8 17.1
GTEX-14E1K-0326-SM-5S2PE 17.0
GTEX-TKQ2-1726-SM-4DXUP 17.0
GTEX-145MF-0826-SM-5QGQA 16.9
GTEX-ZYT6-0626-SM-5E45V 16.9
GTEX-12KS4-1326-SM-5LUB3 16.8
GTEX-PX3G-0826-SM-48TZS 16.8
GTEX-ZAB5-0426-SM-5CVMI 16.8
GTEX-REY6-1226-SM-48FDR 16.6
GTEX-X261-1726-SM-4PQYT 16.6
GTEX-11ZVC-0726-SM-5FQT9 16.5
GTEX-14A5I-1726-SM-5QGQ5 16.5
GTEX-12WSM-0726-SM-5GCOW 16.4
GTEX-1399R-1226-SM-5P9GF 16.4
GTEX-14DAQ-1726-SM-5S2R2 16.4
GTEX-Z9EW-0426-SM-5CVM9 16.3
GTEX-ZF2S-3026-SM-4WWCH 16.3
GTEX-RU72-1426-SM-46MUF 16.1
GTEX-UPK5-1426-SM-4JBHH 16.1
GTEX-X4EP-1026-SM-4QAS5 16.1
GTEX-ZAB4-0826-SM-5LU9D 15.8
GTEX-12WSI-0226-SM-5GCNA 15.7
GTEX-13N2G-0926-SM-5IFGJ 15.7
GTEX-139TU-0826-SM-5IJFG 15.1
GTEX-QV44-0326-SM-4R1KD 15.1
GTEX-13SLX-1226-SM-5S2Q6 15.0
GTEX-RNOR-1426-SM-48FDJ 15.0
GTEX-SJXC-1226-SM-4DM78 15.0
GTEX-1399T-0826-SM-5IFES 14.8
GTEX-RTLS-1326-SM-46MUN 14.8
GTEX-11DXZ-0126-SM-5EGGY 14.7
GTEX-13FLV-0326-SM-5N9DJ 14.7
GTEX-OOBJ-0826-SM-3NB2K 14.6
GTEX-RN64-1826-SM-48FDV 14.6
GTEX-11DXY-0526-SM-5EGGQ 14.5
GTEX-14753-1626-SM-5NQ9L 14.5
GTEX-13112-1426-SM-5EGH8 14.4
GTEX-13NZB-0626-SM-5IFH6 14.4
GTEX-13OW6-2626-SM-5IFF2 14.4
GTEX-131YS-1626-SM-5HL6C 14.3
GTEX-RWSA-1426-SM-47JXA 14.2
GTEX-T6MN-1226-SM-3NMA5 14.2
GTEX-WFON-1726-SM-4LVMQ 14.1
GTEX-11ZUS-2526-SM-59872 14.0
GTEX-XBEC-1526-SM-4AT68 13.8
GTEX-13NYB-1026-SM-5IFH3 13.7
GTEX-ZVT3-1626-SM-5GU66 13.7
GTEX-145MO-2326-SM-5NQ9K 13.6
GTEX-13FTZ-0726-SM-5IFFY 13.4
GTEX-WZTO-0626-SM-4PQYY 13.4
GTEX-11ZTS-1426-SM-5EQMM 13.1
GTEX-1269C-0626-SM-5FQSS 12.9
GTEX-12WSD-1426-SM-5GCN9 12.9
GTEX-1212Z-0226-SM-59HLF 12.8
GTEX-Y5V5-0926-SM-4VBPZ 12.8
GTEX-11OF3-0726-SM-5BC4Z 12.7
GTEX-13QJC-0726-SM-5RQJK 12.6
GTEX-13VXU-0926-SM-5IFFH 12.6
GTEX-147JS-1126-SM-5RQIW 12.6
GTEX-XOTO-0826-SM-4B65O 12.6
GTEX-11NUK-1226-SM-5P9GM 12.5
GTEX-139TS-1426-SM-5IFJD 12.5
GTEX-YECK-1926-SM-4W21H 12.5
GTEX-11NV4-1326-SM-5HL6V 12.3
GTEX-ZVT4-0626-SM-5E45T 12.3
GTEX-Q2AG-1126-SM-48U1P 11.7
GTEX-131XH-0626-SM-5LZWH 11.4
GTEX-145LU-1326-SM-5LU9N 9.4
GTEX-11GSP-0626-SM-5986T 8.3
GTEX-12ZZZ-1326-SM-59HKW 5.9
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

27.2

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 27.2
FF:10018-101C9 64,69,70 years, mixed 27.2

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.