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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.0TPM
GTEx:5.8RPKM
FANTOM5:6.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Low
 

Antibody staining

Antibody CAB047304

 

Glandular cells

Low  
 
 
 

SMALL INTESTINE - HPA RNA-seq

Average TPM

14.0

overview Male, age 65
Sample 1
TPM: 16.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 19.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 9.1
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 10.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

5.8

GTEx sample id

RPKM

2.44.77.30.713.702468101214161820222426
 
2.44.77.30.713.702468101214161820222426

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 5.8
Samples: 88

Max RPKM: 27.4
Min RPKM: 0.7
Std RPKM: 5
Median RPKM: 4.6
GTEX-YB5E-1526-SM-5IFIE 27.4
GTEX-11DXX-1626-SM-5H11H 26.9
GTEX-13O61-1326-SM-5KM31 21.8
GTEX-Y5LM-1626-SM-4VDTB 18.0
GTEX-ZLV1-1126-SM-4WWBW 15.1
GTEX-XXEK-1026-SM-4BRUW 13.7
GTEX-ZZ64-0526-SM-5GZXM 13.1
GTEX-ZTSS-0926-SM-59865 12.3
GTEX-11EQ9-1326-SM-5985X 11.3
GTEX-XBED-1426-SM-4AT4G 10.9
GTEX-14E6E-1626-SM-5RQI7 10.9
GTEX-ZXES-1526-SM-5NQ95 9.5
GTEX-ZA64-1226-SM-5HL7B 8.9
GTEX-13FTW-2026-SM-5IJE2 8.7
GTEX-11I78-1126-SM-5A5K5 8.7
GTEX-XUZC-1426-SM-4BRV3 8.6
GTEX-XGQ4-1326-SM-4GIDU 8.6
GTEX-ZPCL-1726-SM-57WEO 8.6
GTEX-14DAR-1426-SM-5RQIR 8.4
GTEX-ZYFG-2026-SM-5E43Y 8.1
GTEX-12BJ1-1926-SM-5HL9Z 7.7
GTEX-ZVT2-2126-SM-5NQ93 7.3
GTEX-ZYWO-1526-SM-5SIAL 7.3
GTEX-1122O-1326-SM-5H11F 6.6
GTEX-1399S-2026-SM-5KM4B 6.3
GTEX-139YR-2226-SM-5IFFW 6.3
GTEX-1399U-2126-SM-5IFEZ 6.2
GTEX-11XUK-1426-SM-5EQMG 5.9
GTEX-13CF3-1226-SM-5LZXN 5.8
GTEX-WFG7-1726-SM-4LVME 5.6
GTEX-XAJ8-0526-SM-47JYK 5.5
GTEX-ZP4G-1626-SM-57WGD 5.4
GTEX-13D11-0726-SM-5LZZB 5.3
GTEX-WFG8-1626-SM-4LVMB 5.3
GTEX-13113-1226-SM-5EGHT 5.1
GTEX-ZVP2-1726-SM-5GU5P 5.1
GTEX-ZVZP-1826-SM-5GZXB 5.1
GTEX-133LE-1426-SM-5IFH1 5.0
GTEX-111CU-1326-SM-5NQ8L 5.0
GTEX-YEC4-1726-SM-4W21E 4.9
GTEX-11P7K-1626-SM-5GU63 4.9
GTEX-12WSK-1526-SM-5CVNO 4.9
GTEX-139T6-1026-SM-5IJGC 4.8
GTEX-145LT-1026-SM-5LU9O 4.7
GTEX-YF7O-1826-SM-5IFIU 4.6
GTEX-13RTK-0826-SM-5Q5C6 4.6
GTEX-WQUQ-2426-SM-4MVNW 4.5
GTEX-UPK5-2026-SM-4JBIM 4.5
GTEX-131XF-1326-SM-5GCMQ 4.5
GTEX-ZEX8-1826-SM-57WBH 4.4
GTEX-111YS-1426-SM-5GID8 4.3
GTEX-ZPIC-2326-SM-57WDW 4.0
GTEX-131XG-1726-SM-5LZUR 3.9
GTEX-Y114-1426-SM-4TT6W 3.9
GTEX-11DXZ-1326-SM-5H11X 3.8
GTEX-WFJO-0926-SM-4LVM2 3.8
GTEX-XMK1-1826-SM-4B66F 3.8
GTEX-Z9EW-0926-SM-5CVMM 3.8
GTEX-13QBU-1926-SM-5IJEW 3.8
GTEX-ZTPG-2626-SM-57WFX 3.7
GTEX-13PL7-2626-SM-5IFH4 3.3
GTEX-13OVI-1926-SM-5IJCG 3.1
GTEX-13O21-1026-SM-5IJDU 3.0
GTEX-X5EB-1626-SM-4E3IV 2.8
GTEX-1192X-2526-SM-59868 2.6
GTEX-ZLFU-1526-SM-4WWBT 2.4
GTEX-VUSG-1726-SM-4KKZL 2.4
GTEX-Y3IK-1726-SM-4YCCR 2.3
GTEX-13111-1426-SM-5DUW3 2.2
GTEX-11VI4-1626-SM-5EQKO 2.1
GTEX-WRHK-1026-SM-4MVOD 2.1
GTEX-ZTX8-0526-SM-59HLD 2.0
GTEX-1399R-2026-SM-5K7WN 2.0
GTEX-11NSD-1726-SM-5N9C3 1.9
GTEX-Y9LG-1626-SM-5IFHM 1.8
GTEX-ZQG8-2526-SM-57WEQ 1.8
GTEX-13FH7-1226-SM-5IJFK 1.6
GTEX-WH7G-1626-SM-4LVMY 1.6
GTEX-ZQUD-0926-SM-57WE3 1.5
GTEX-11P82-0826-SM-5P9GU 1.3
GTEX-117YX-0326-SM-5GICL 1.2
GTEX-X15G-1426-SM-4PQZK 1.2
GTEX-145ME-0926-SM-5O9AR 1.2
GTEX-ZF2S-1726-SM-57WFT 1.1
GTEX-148VJ-2226-SM-5NQ9M 1.1
GTEX-ZC5H-2326-SM-4WAYT 0.9
GTEX-VJYA-0926-SM-4KL1N 0.9
GTEX-WEY5-1526-SM-4LMJF 0.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

6.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 6.4
FF:10024-101D6 15,40,85 years, mixed 6.4

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