Tissue expression of GPD1L - Staining in colon

COLON - Expression summary

RNA expression

HPA:	39.4	TPM
GTEx:	18.9	RPKM
FANTOM5:	43.0	Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seq

Average TPM	39.4

Male, age 54

Sample 1
TPM: 29.6

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 32.6

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 49.6

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 53.5

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 17.3

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 29.5

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 47.1

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 43.0

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 37.9

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 48.8

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 48.9

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 44.8

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 29.7

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	18.9

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 15.6

Samples: 149

Max RPKM: 45.8
Min RPKM: 4.5
Std RPKM: 6.8
Median RPKM: 14.7

GTEX-ZVT2-1726-SM-51MRO

45.8

GTEX-13QBU-2026-SM-5KLZB

38.2

GTEX-13VXT-2026-SM-5L3EW

32.6

GTEX-11ZTT-1626-SM-5EQKR

32.2

GTEX-12BJ1-2026-SM-5FQUH

31.0

GTEX-1399U-2226-SM-5KLZI

30.3

GTEX-XBED-1726-SM-47JYO

29.4

GTEX-1122O-1426-SM-5H11R

28.1

Show all

Colon - Transverse

Colon - Transverse
RPKM: 21.4

Samples: 196

Max RPKM: 39.7
Min RPKM: 3.4
Std RPKM: 6
Median RPKM: 22.3

GTEX-11P82-1026-SM-5BC5J

39.7

GTEX-11EM3-1526-SM-5A5KN

34.5

GTEX-ZF2S-1926-SM-4WWAN

33.4

GTEX-13W3W-2126-SM-5K7UX

33.2

GTEX-S7SF-1926-SM-4AT5B

32.7

GTEX-144GM-1226-SM-5LU52

32.4

GTEX-13OVG-1426-SM-5K7VP

31.4

GTEX-XMK1-1726-SM-4B64Z

30.7

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	43.0

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 43.0

FF:10014-101C5

62,83,84 years, mixed

43.0