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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:23.4TPM
GTEx:8.9RPKM
FANTOM5:71.9Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA037756

 

Antibody CAB000012

 

Antibody CAB075722

 

Glandular cells

Not detected   Not detected   Not detected  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

23.4

overview Male, age 65
Sample 1
TPM: 33.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 29.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 23.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 7.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

8.9

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 8.9
Samples: 88

Max RPKM: 20.5
Min RPKM: 0.2
Std RPKM: 4.8
Median RPKM: 8.8
GTEX-1399U-2126-SM-5IFEZ 20.5
GTEX-1399R-2026-SM-5K7WN 19.7
GTEX-UPK5-2026-SM-4JBIM 18.4
GTEX-ZVZP-1826-SM-5GZXB 17.9
GTEX-ZVP2-1726-SM-5GU5P 17.3
GTEX-WRHK-1026-SM-4MVOD 17.3
GTEX-Z9EW-0926-SM-5CVMM 16.6
GTEX-12BJ1-1926-SM-5HL9Z 16.5
GTEX-131XG-1726-SM-5LZUR 16.1
GTEX-ZP4G-1626-SM-57WGD 15.6
GTEX-XXEK-1026-SM-4BRUW 15.6
GTEX-1399S-2026-SM-5KM4B 15.1
GTEX-11EQ9-1326-SM-5985X 14.9
GTEX-145ME-0926-SM-5O9AR 14.6
GTEX-YEC4-1726-SM-4W21E 14.3
GTEX-WH7G-1626-SM-4LVMY 13.8
GTEX-XAJ8-0526-SM-47JYK 13.6
GTEX-148VJ-2226-SM-5NQ9M 13.5
GTEX-131XF-1326-SM-5GCMQ 13.5
GTEX-ZLFU-1526-SM-4WWBT 12.9
GTEX-X15G-1426-SM-4PQZK 11.9
GTEX-WFJO-0926-SM-4LVM2 11.7
GTEX-XBED-1426-SM-4AT4G 11.7
GTEX-ZEX8-1826-SM-57WBH 11.7
GTEX-13FH7-1226-SM-5IJFK 11.6
GTEX-13O61-1326-SM-5KM31 11.5
GTEX-11XUK-1426-SM-5EQMG 11.3
GTEX-ZQG8-2526-SM-57WEQ 11.3
GTEX-14E6E-1626-SM-5RQI7 10.7
GTEX-X5EB-1626-SM-4E3IV 10.4
GTEX-11P7K-1626-SM-5GU63 10.3
GTEX-11NSD-1726-SM-5N9C3 10.1
GTEX-13FTW-2026-SM-5IJE2 10.0
GTEX-ZPIC-2326-SM-57WDW 9.6
GTEX-14DAR-1426-SM-5RQIR 9.6
GTEX-ZTX8-0526-SM-59HLD 9.6
GTEX-139YR-2226-SM-5IFFW 9.4
GTEX-139T6-1026-SM-5IJGC 9.4
GTEX-Y9LG-1626-SM-5IFHM 9.3
GTEX-13RTK-0826-SM-5Q5C6 9.2
GTEX-ZA64-1226-SM-5HL7B 9.2
GTEX-11VI4-1626-SM-5EQKO 9.0
GTEX-11P82-0826-SM-5P9GU 8.9
GTEX-13QBU-1926-SM-5IJEW 8.8
GTEX-13O21-1026-SM-5IJDU 8.7
GTEX-145LT-1026-SM-5LU9O 8.7
GTEX-VJYA-0926-SM-4KL1N 8.6
GTEX-ZZ64-0526-SM-5GZXM 8.5
GTEX-13111-1426-SM-5DUW3 8.4
GTEX-ZVT2-2126-SM-5NQ93 8.4
GTEX-1122O-1326-SM-5H11F 8.1
GTEX-13CF3-1226-SM-5LZXN 7.9
GTEX-13D11-0726-SM-5LZZB 7.3
GTEX-VUSG-1726-SM-4KKZL 7.1
GTEX-11DXZ-1326-SM-5H11X 7.0
GTEX-WFG7-1726-SM-4LVME 6.6
GTEX-Y114-1426-SM-4TT6W 6.4
GTEX-ZTSS-0926-SM-59865 6.2
GTEX-11I78-1126-SM-5A5K5 6.0
GTEX-XGQ4-1326-SM-4GIDU 6.0
GTEX-ZYWO-1526-SM-5SIAL 5.9
GTEX-ZXES-1526-SM-5NQ95 5.8
GTEX-XUZC-1426-SM-4BRV3 5.5
GTEX-YF7O-1826-SM-5IFIU 5.3
GTEX-ZTPG-2626-SM-57WFX 5.3
GTEX-11DXX-1626-SM-5H11H 5.1
GTEX-ZLV1-1126-SM-4WWBW 5.0
GTEX-ZYFG-2026-SM-5E43Y 4.9
GTEX-WEY5-1526-SM-4LMJF 4.8
GTEX-13PL7-2626-SM-5IFH4 4.8
GTEX-ZC5H-2326-SM-4WAYT 4.6
GTEX-Y5LM-1626-SM-4VDTB 4.4
GTEX-13113-1226-SM-5EGHT 4.4
GTEX-YB5E-1526-SM-5IFIE 4.3
GTEX-ZPCL-1726-SM-57WEO 4.1
GTEX-133LE-1426-SM-5IFH1 3.8
GTEX-WFG8-1626-SM-4LVMB 3.4
GTEX-WQUQ-2426-SM-4MVNW 3.1
GTEX-Y3IK-1726-SM-4YCCR 2.6
GTEX-111YS-1426-SM-5GID8 2.1
GTEX-12WSK-1526-SM-5CVNO 2.1
GTEX-1192X-2526-SM-59868 2.0
GTEX-ZQUD-0926-SM-57WE3 1.3
GTEX-ZF2S-1726-SM-57WFT 1.3
GTEX-111CU-1326-SM-5NQ8L 1.0
GTEX-XMK1-1826-SM-4B66F 0.9
GTEX-117YX-0326-SM-5GICL 0.7
GTEX-13OVI-1926-SM-5IJCG 0.2
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

71.9

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 71.9
FF:10024-101D6 15,40,85 years, mixed 71.9

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