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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.4TPM
GTEx:13.1RPKM
FANTOM5:8.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA042620

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Not detected  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA042620

  

Adipocytes

 Low  

Chondrocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

16.4
N/A Female, age 80
Sample 1
TPM: 22.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 10.7
N/A Female, age 57
Sample 3
TPM: 10.3
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 20.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 18.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 13.4
Samples: 350

Max RPKM: 26.1
Min RPKM: 6.9
Std RPKM: 3.1
Median RPKM: 12.8
GTEX-ZYY3-0226-SM-5E45M 26.1
GTEX-1269C-2726-SM-5EGJ4 25.5
GTEX-Y3IK-2526-SM-4WWDM 24.2
GTEX-13OW8-1226-SM-5K7XD 22.8
GTEX-ZE7O-0226-SM-5S2N1 21.9
GTEX-ZYFC-0326-SM-5NQ7H 21.5
GTEX-146FH-0226-SM-5QGPQ 21.0
GTEX-11H98-0226-SM-5NQ89 20.8
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 12.5
Samples: 227

Max RPKM: 25.6
Min RPKM: 6.8
Std RPKM: 2.9
Median RPKM: 12.4
GTEX-11WQK-1526-SM-5EGKN 25.6
GTEX-13112-1126-SM-5GCMY 22.6
GTEX-132QS-0826-SM-5K7WV 20.1
GTEX-13JUV-0626-SM-5J1MQ 19.7
GTEX-13NYS-0726-SM-5J1OR 19.4
GTEX-13PVQ-2226-SM-5L3G9 19.1
GTEX-13OW8-0326-SM-5L3FB 18.9
GTEX-12584-2126-SM-5FQUM 18.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

8.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 8.2
FF:10010-101C1 65,65,76 years, mixed 8.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.