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Gene name

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Method

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Expression

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Specificity

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Detectable

Cell line

Detectable

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Antibodies

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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:15.2TPM
GTEx:13.2RPKM
FANTOM5:5.6Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Low
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA042620

 

Adipocytes

Not detected  

Glandular cells

Low  

Myoepithelial cells

Low  
 
 
 

BREAST - HPA RNA-seq

Average TPM

15.2

overview Female, age 52
Sample 1
TPM: 14.1
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 14.1
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 16.6
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 15.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 13.2
Samples: 214

Max RPKM: 31.2
Min RPKM: 7.3
Std RPKM: 3.2
Median RPKM: 12.5
GTEX-11DZ1-0326-SM-5N9BN 31.2
GTEX-11P82-1326-SM-5HL62 25.5
GTEX-REY6-2426-SM-48FF5 25.4
GTEX-1117F-2826-SM-5GZXL 23.8
GTEX-UTHO-1026-SM-3GAF7 23.7
GTEX-13S86-1226-SM-5S2OA 21.9
GTEX-11DXY-2326-SM-5GICW 21.7
GTEX-11TUW-1826-SM-5BC5D 21.6
GTEX-11WQK-2426-SM-5GU5C 21.5
GTEX-13PVQ-1026-SM-5KM3M 20.8
GTEX-ZYFC-0826-SM-5E44K 20.1
GTEX-WOFL-0826-SM-3MJG1 18.9
GTEX-S33H-0326-SM-4AD6N 18.7
GTEX-XYKS-1326-SM-4BRUN 18.3
GTEX-S7SE-0826-SM-4AT4D 18.2
GTEX-144GM-0926-SM-5O994 18.1
GTEX-X4XY-0926-SM-4E3JD 18.1
GTEX-X261-0626-SM-3NMD9 17.8
GTEX-ZAB4-2526-SM-5HL8M 17.8
GTEX-11NV4-2026-SM-5N9DG 17.4
GTEX-ZYW4-0826-SM-5GIDG 17.1
GTEX-R53T-1526-SM-48FEK 16.4
GTEX-XQ3S-1326-SM-4BOPQ 16.2
GTEX-13O61-1826-SM-5KM4I 16.0
GTEX-ZTTD-1026-SM-51MRD 16.0
GTEX-ZY6K-1626-SM-5GZWV 16.0
GTEX-1192X-2326-SM-5987X 15.9
GTEX-13CF3-2126-SM-5IFJP 15.9
GTEX-145MO-0826-SM-5NQBL 15.8
GTEX-13NZ9-1026-SM-5MR5K 15.7
GTEX-11TT1-2126-SM-5GU5Y 15.6
GTEX-117XS-1926-SM-5GICO 15.5
GTEX-1314G-1226-SM-5BC6D 15.4
GTEX-S32W-2026-SM-4AD6E 15.4
GTEX-13OW8-0226-SM-5K7UP 15.3
GTEX-Y8E4-1626-SM-5S2MW 15.3
GTEX-12WSB-0626-SM-59HJO 15.1
GTEX-Y114-2026-SM-4TT7L 15.1
GTEX-14ABY-2126-SM-5QGQZ 15.0
GTEX-Q2AG-0326-SM-48U1O 15.0
GTEX-ZDXO-0126-SM-5S2ND 15.0
GTEX-ZLFU-2126-SM-4WWEV 15.0
GTEX-ZUA1-1526-SM-59HLS 15.0
GTEX-ZVZQ-0826-SM-51MRF 14.8
GTEX-ZYWO-2326-SM-5GZY4 14.8
GTEX-12KS4-0126-SM-5Q5A5 14.7
GTEX-VJWN-0726-SM-3GIJ8 14.7
GTEX-11NSD-0926-SM-5N9DR 14.6
GTEX-13O3O-0826-SM-5K7WE 14.6
GTEX-QEG5-0726-SM-4R1JQ 14.6
GTEX-TKQ2-1826-SM-33HB2 14.6
GTEX-131XW-0726-SM-5EGK3 14.5
GTEX-13CF2-2026-SM-5K7VI 14.5
GTEX-QEL4-2126-SM-447AE 14.5
GTEX-T2YK-2226-SM-32QPT 14.5
GTEX-13N1W-0626-SM-5MR4U 14.4
GTEX-Y5V5-2126-SM-4WWFO 14.4
GTEX-ZV7C-1826-SM-5NQ83 14.4
GTEX-ZVE2-1226-SM-5NQ8R 14.4
GTEX-111YS-1926-SM-5GICC 14.3
GTEX-139TU-0626-SM-5KM3X 14.3
GTEX-13O3P-0826-SM-5L3DH 14.3
GTEX-11ONC-2126-SM-5HL6E 14.2
GTEX-133LE-1726-SM-5K7VQ 14.2
GTEX-RUSQ-2026-SM-4GIAK 14.2
GTEX-XV7Q-2326-SM-4BRVZ 14.2
GTEX-XGQ4-0926-SM-4AT4U 14.1
GTEX-12BJ1-1826-SM-5HL9N 14.0
GTEX-W5X1-2326-SM-3GIL6 13.9
GTEX-132AR-0826-SM-5EGK6 13.8
GTEX-13N11-1726-SM-5J1OJ 13.8
GTEX-SE5C-2126-SM-4BRUJ 13.8
GTEX-11P81-1926-SM-5BC53 13.7
GTEX-12ZZX-1126-SM-5EGKB 13.7
GTEX-ZAJG-0626-SM-5HL8X 13.7
GTEX-ZC5H-2626-SM-5J2MG 13.7
GTEX-XMD2-0926-SM-4WWEF 13.6
GTEX-XUW1-2326-SM-4BOO5 13.6
GTEX-ZYT6-0126-SM-5E45J 13.6
GTEX-11EMC-2026-SM-5A5JV 13.5
GTEX-13O3Q-2226-SM-5KM4O 13.5
GTEX-QMRM-1626-SM-4R1KV 13.4
GTEX-S4Q7-1126-SM-4AD6R 13.4
GTEX-T5JW-2026-SM-4DM63 13.4
GTEX-WI4N-1426-SM-3LK7H 13.4
GTEX-ZWKS-2826-SM-5NQ74 13.4
GTEX-ZF2S-2026-SM-5E461 13.3
GTEX-ZVT2-1826-SM-5NQ8W 13.2
GTEX-11EQ9-1826-SM-5Q5AJ 13.1
GTEX-1211K-1926-SM-5EQLB 13.1
GTEX-U3ZN-1926-SM-4DXSG 13.1
GTEX-X4EP-2926-SM-3P5YQ 13.0
GTEX-11OF3-1926-SM-59889 12.8
GTEX-13113-1726-SM-5GCOO 12.8
GTEX-13FTY-2226-SM-5J1ND 12.8
GTEX-ZXES-0826-SM-5E43C 12.8
GTEX-SIU7-1626-SM-4BRUK 12.7
GTEX-11GSO-1926-SM-5A5K3 12.6
GTEX-11O72-2126-SM-5N9FO 12.6
GTEX-13NZ8-0126-SM-5IJCT 12.6
GTEX-PSDG-1626-SM-48TCQ 12.6
GTEX-VUSG-2226-SM-4KKZO 12.6
GTEX-WRHU-0326-SM-3MJFY 12.6
GTEX-WYVS-1726-SM-3NMAY 12.6
GTEX-Y111-2026-SM-4SOJA 12.6
GTEX-11PRG-0826-SM-5EQ6A 12.5
GTEX-11WQC-1726-SM-5GU4W 12.5
GTEX-12WSM-1726-SM-5BC6J 12.5
GTEX-132NY-0826-SM-5K7Y7 12.5
GTEX-13NZB-2126-SM-5MR4Y 12.5
GTEX-13QIC-2326-SM-5LU5N 12.5
GTEX-14753-2426-SM-5LU8U 12.5
GTEX-14AS3-1626-SM-5S2OY 12.5
GTEX-ZVT4-1026-SM-57WC4 12.5
GTEX-11EI6-0626-SM-5985T 12.4
GTEX-QDT8-0626-SM-48TYW 12.4
GTEX-QVJO-1826-SM-447C9 12.4
GTEX-T6MO-0326-SM-32QOK 12.4
GTEX-Y5LM-1726-SM-4VDSX 12.4
GTEX-139T8-0826-SM-5L3DE 12.3
GTEX-144GL-2026-SM-5LU3O 12.3
GTEX-11GS4-2126-SM-5A5KR 12.2
GTEX-1399U-1826-SM-5PNZ1 12.2
GTEX-13D11-1026-SM-5IJFB 12.2
GTEX-S4P3-1326-SM-4AD6V 12.2
GTEX-TML8-1226-SM-32QON 12.2
GTEX-131YS-0626-SM-5EGKL 12.1
GTEX-T2IS-1526-SM-32QPR 12.1
GTEX-U3ZH-1426-SM-4DXSR 12.1
GTEX-UPK5-2326-SM-3P5Z8 12.1
GTEX-T6MN-0726-SM-32PML 12.0
GTEX-U8XE-0826-SM-4E3J1 12.0
GTEX-Y9LG-1426-SM-5IFJZ 12.0
GTEX-11DXZ-1926-SM-5GZZL 11.9
GTEX-132Q8-1426-SM-5EGK7 11.9
GTEX-13OW5-2226-SM-5L3HC 11.9
GTEX-Y3IK-2326-SM-4WWDT 11.9
GTEX-13PL6-2926-SM-5L3I2 11.8
GTEX-145LT-0726-SM-5S2VM 11.8
GTEX-147F4-2826-SM-5NQBN 11.8
GTEX-UJHI-1426-SM-3DB9C 11.8
GTEX-XOT4-0726-SM-4GIAW 11.8
GTEX-ZA64-1526-SM-5CVMD 11.8
GTEX-11EM3-1326-SM-5N9C6 11.7
GTEX-14E6E-1326-SM-5S2NR 11.7
GTEX-XMK1-1126-SM-4IHJ8 11.7
GTEX-XUZC-1626-SM-4BRVP 11.7
GTEX-ZLV1-1426-SM-4WWES 11.7
GTEX-11DXW-0626-SM-5N9ER 11.6
GTEX-YFCO-1826-SM-4W1YH 11.6
GTEX-117YX-1426-SM-5H12H 11.5
GTEX-1269C-2426-SM-5FQSN 11.5
GTEX-R3RS-0626-SM-48FE1 11.5
GTEX-T5JC-2126-SM-32PMO 11.5
GTEX-146FH-0826-SM-5SI8T 11.4
GTEX-TKQ1-0226-SM-33HB5 11.4
GTEX-TMMY-0726-SM-33HBE 11.4
GTEX-ZU9S-1926-SM-5NQBP 11.4
GTEX-11ZUS-0826-SM-5FQUY 11.3
GTEX-ZZPU-0626-SM-5E43T 11.3
GTEX-RWS6-1926-SM-47JXY 11.2
GTEX-WXYG-2226-SM-4E3IM 11.2
GTEX-YFC4-1426-SM-5IFJG 11.2
GTEX-ZV6S-1826-SM-5NQ8D 11.2
GTEX-13FTX-1126-SM-5N9EN 11.1
GTEX-ZEX8-2226-SM-57WC6 11.1
GTEX-ZVTK-0326-SM-51MRR 11.1
GTEX-11LCK-2426-SM-5HL5F 11.0
GTEX-RU72-0626-SM-46MUI 11.0
GTEX-ZDTT-2126-SM-5S2OJ 11.0
GTEX-ZT9W-2026-SM-51MRA 11.0
GTEX-ZTX8-1226-SM-4YCE9 11.0
GTEX-145ME-1526-SM-5Q5F2 10.9
GTEX-R55D-0826-SM-48FEA 10.9
GTEX-X15G-1626-SM-3NMB3 10.9
GTEX-XQ8I-2426-SM-4WAXY 10.9
GTEX-ZZ64-1226-SM-5E43R 10.9
GTEX-ZF3C-2326-SM-5S2MZ 10.8
GTEX-1313W-0826-SM-5EQ4T 10.7
GTEX-YJ8O-2226-SM-5IFHW 10.7
GTEX-139T6-1626-SM-5PNYZ 10.6
GTEX-13W46-0826-SM-5LU3H 10.6
GTEX-YB5K-1626-SM-5IFIN 10.6
GTEX-R55F-1726-SM-2TF4R 10.5
GTEX-Y5V6-2126-SM-4WWFX 10.4
GTEX-1122O-1226-SM-5H113 10.2
GTEX-11I78-2226-SM-5PNYA 10.2
GTEX-XBED-1626-SM-47JYN 10.2
GTEX-12WSN-1326-SM-5GCNT 10.1
GTEX-ZF29-1926-SM-5S2P1 10.1
GTEX-13W3W-1226-SM-5LU4H 10.0
GTEX-Y3I4-1526-SM-4TT7K 10.0
GTEX-145MN-1926-SM-5SIAI 9.9
GTEX-WY7C-2726-SM-3NB3P 9.9
GTEX-YEC3-1026-SM-5IFI5 9.9
GTEX-S341-1526-SM-4AD6K 9.8
GTEX-S4UY-0726-SM-4AD6X 9.8
GTEX-13FHO-0826-SM-5L3E8 9.7
GTEX-ZDYS-1126-SM-5K7UB 9.7
GTEX-12WSK-2226-SM-5GCO5 9.6
GTEX-WYBS-0926-SM-3NM94 9.6
GTEX-WFON-1826-SM-3GILG 9.5
GTEX-WYJK-1326-SM-3NB2T 9.4
GTEX-XMD1-0826-SM-4AT52 9.3
GTEX-Y8LW-1626-SM-5IFHX 9.3
GTEX-XUJ4-1926-SM-4BOOV 9.1
GTEX-ZPIC-1126-SM-5BC7F 9.0
GTEX-ZQG8-0726-SM-5P9H9 9.0
GTEX-13FTW-1426-SM-5LZWZ 8.7
GTEX-YB5E-1726-SM-5IFJ3 8.6
GTEX-11P7K-0726-SM-5EGKX 8.3
GTEX-11ZTT-2326-SM-5EQLG 8.0
GTEX-ZQUD-1926-SM-51MSA 7.8
GTEX-U412-1826-SM-4DXTJ 7.3
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

5.6

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 5.6
FF:10080-102A8 77 years, female 5.6

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