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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:17.7TPM
GTEx:11.0RPKM
FANTOM5:36.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:Not detected
 

Antibody staining

Antibody HPA005993

 

Antibody CAB002580

 

Glandular cells

Not detected   Not detected  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

17.7

overview Male, age 65
Sample 1
TPM: 13.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 11.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 24.4
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 21.5

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

RPKM

3.75.412.40.725.101020304050607080
 
3.75.412.40.725.101020304050607080

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 11.0
Samples: 88

Max RPKM: 81.9
Min RPKM: 0.7
Std RPKM: 13.3
Median RPKM: 5.4
GTEX-1192X-2526-SM-59868 81.9
GTEX-117YX-0326-SM-5GICL 53.4
GTEX-Y3IK-1726-SM-4YCCR 47.6
GTEX-ZF2S-1726-SM-57WFT 44.4
GTEX-ZQUD-0926-SM-57WE3 44.2
GTEX-WEY5-1526-SM-4LMJF 38.8
GTEX-13111-1426-SM-5DUW3 37.4
GTEX-XMK1-1826-SM-4B66F 29.6
GTEX-13QBU-1926-SM-5IJEW 25.1
GTEX-13OVI-1926-SM-5IJCG 21.6
GTEX-111CU-1326-SM-5NQ8L 21.4
GTEX-12WSK-1526-SM-5CVNO 20.5
GTEX-Y5LM-1626-SM-4VDTB 19.7
GTEX-WFG7-1726-SM-4LVME 19.1
GTEX-ZC5H-2326-SM-4WAYT 16.9
GTEX-ZPIC-2326-SM-57WDW 16.7
GTEX-13RTK-0826-SM-5Q5C6 16.4
GTEX-WFG8-1626-SM-4LVMB 15.2
GTEX-145ME-0926-SM-5O9AR 15.2
GTEX-UPK5-2026-SM-4JBIM 14.3
GTEX-ZQG8-2526-SM-57WEQ 12.9
GTEX-VJYA-0926-SM-4KL1N 12.6
GTEX-XXEK-1026-SM-4BRUW 12.3
GTEX-ZTPG-2626-SM-57WFX 11.6
GTEX-X15G-1426-SM-4PQZK 11.3
GTEX-139T6-1026-SM-5IJGC 11.2
GTEX-139YR-2226-SM-5IFFW 10.5
GTEX-WQUQ-2426-SM-4MVNW 10.3
GTEX-XBED-1426-SM-4AT4G 9.7
GTEX-ZA64-1226-SM-5HL7B 8.7
GTEX-Y114-1426-SM-4TT6W 8.4
GTEX-13O21-1026-SM-5IJDU 8.4
GTEX-XUZC-1426-SM-4BRV3 8.2
GTEX-131XG-1726-SM-5LZUR 8.2
GTEX-YEC4-1726-SM-4W21E 7.5
GTEX-ZP4G-1626-SM-57WGD 7.3
GTEX-XAJ8-0526-SM-47JYK 7.3
GTEX-VUSG-1726-SM-4KKZL 7.0
GTEX-ZYWO-1526-SM-5SIAL 6.4
GTEX-14DAR-1426-SM-5RQIR 5.9
GTEX-X5EB-1626-SM-4E3IV 5.6
GTEX-YB5E-1526-SM-5IFIE 5.6
GTEX-148VJ-2226-SM-5NQ9M 5.5
GTEX-13113-1226-SM-5EGHT 5.4
GTEX-13PL7-2626-SM-5IFH4 5.4
GTEX-ZXES-1526-SM-5NQ95 5.2
GTEX-ZTSS-0926-SM-59865 5.2
GTEX-ZTX8-0526-SM-59HLD 5.2
GTEX-Z9EW-0926-SM-5CVMM 5.1
GTEX-ZVT2-2126-SM-5NQ93 5.1
GTEX-11DXZ-1326-SM-5H11X 5.0
GTEX-1399R-2026-SM-5K7WN 5.0
GTEX-11P82-0826-SM-5P9GU 4.9
GTEX-ZLV1-1126-SM-4WWBW 4.9
GTEX-ZVZP-1826-SM-5GZXB 4.9
GTEX-YF7O-1826-SM-5IFIU 4.8
GTEX-ZPCL-1726-SM-57WEO 4.7
GTEX-11XUK-1426-SM-5EQMG 4.4
GTEX-13FTW-2026-SM-5IJE2 4.3
GTEX-1122O-1326-SM-5H11F 4.3
GTEX-11I78-1126-SM-5A5K5 4.2
GTEX-WRHK-1026-SM-4MVOD 4.1
GTEX-145LT-1026-SM-5LU9O 3.9
GTEX-11EQ9-1326-SM-5985X 3.8
GTEX-131XF-1326-SM-5GCMQ 3.8
GTEX-ZLFU-1526-SM-4WWBT 3.7
GTEX-Y9LG-1626-SM-5IFHM 3.6
GTEX-XGQ4-1326-SM-4GIDU 3.4
GTEX-ZZ64-0526-SM-5GZXM 3.3
GTEX-ZEX8-1826-SM-57WBH 3.2
GTEX-11NSD-1726-SM-5N9C3 3.2
GTEX-11P7K-1626-SM-5GU63 3.2
GTEX-13CF3-1226-SM-5LZXN 3.1
GTEX-11VI4-1626-SM-5EQKO 2.9
GTEX-13FH7-1226-SM-5IJFK 2.9
GTEX-133LE-1426-SM-5IFH1 2.8
GTEX-WH7G-1626-SM-4LVMY 2.7
GTEX-1399S-2026-SM-5KM4B 2.7
GTEX-14E6E-1626-SM-5RQI7 2.6
GTEX-11DXX-1626-SM-5H11H 2.6
GTEX-ZVP2-1726-SM-5GU5P 2.5
GTEX-12BJ1-1926-SM-5HL9Z 2.2
GTEX-13O61-1326-SM-5KM31 2.2
GTEX-ZYFG-2026-SM-5E43Y 2.2
GTEX-13D11-0726-SM-5LZZB 1.9
GTEX-1399U-2126-SM-5IFEZ 1.6
GTEX-WFJO-0926-SM-4LVM2 1.2
GTEX-111YS-1426-SM-5GID8 0.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

36.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 36.0
FF:10024-101D6 15,40,85 years, mixed 36.0

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The Human Protein Atlas project is funded
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