We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PPP4R1
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:21.0TPM
GTEx:15.3RPKM
FANTOM5:27.7Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Glandular cells:High
Myoepithelial cells:High
 

Antibody staining

Antibody HPA040905

 

Antibody HPA041089

 

Adipocytes

High   Low  

Glandular cells

High   Medium  

Myoepithelial cells

High   High  
   
   
   

BREAST - HPA RNA-seq

Average TPM

21.0

overview Female, age 52
Sample 1
TPM: 16.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 31.2
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 20.8
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 15.7
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

15.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 15.3
Samples: 214

Max RPKM: 22.3
Min RPKM: 8.1
Std RPKM: 2.6
Median RPKM: 15.2
GTEX-TMMY-0726-SM-33HBE 22.3
GTEX-SIU7-1626-SM-4BRUK 21.7
GTEX-111YS-1926-SM-5GICC 21.5
GTEX-ZV7C-1826-SM-5NQ83 21.5
GTEX-ZY6K-1626-SM-5GZWV 21.0
GTEX-XOT4-0726-SM-4GIAW 20.5
GTEX-T2IS-1526-SM-32QPR 20.4
GTEX-ZF29-1926-SM-5S2P1 20.1
GTEX-T6MN-0726-SM-32PML 19.9
GTEX-ZWKS-2826-SM-5NQ74 19.9
GTEX-VJWN-0726-SM-3GIJ8 19.6
GTEX-11WQC-1726-SM-5GU4W 19.4
GTEX-ZF2S-2026-SM-5E461 19.4
GTEX-132Q8-1426-SM-5EGK7 19.3
GTEX-W5X1-2326-SM-3GIL6 19.3
GTEX-ZF3C-2326-SM-5S2MZ 19.3
GTEX-UPK5-2326-SM-3P5Z8 19.1
GTEX-1122O-1226-SM-5H113 19.0
GTEX-S4P3-1326-SM-4AD6V 19.0
GTEX-WYJK-1326-SM-3NB2T 19.0
GTEX-11DZ1-0326-SM-5N9BN 18.9
GTEX-ZTX8-1226-SM-4YCE9 18.8
GTEX-ZZPU-0626-SM-5E43T 18.7
GTEX-12WSK-2226-SM-5GCO5 18.5
GTEX-13N11-1726-SM-5J1OJ 18.4
GTEX-13O3P-0826-SM-5L3DH 18.4
GTEX-WRHU-0326-SM-3MJFY 18.4
GTEX-WYVS-1726-SM-3NMAY 18.4
GTEX-XBED-1626-SM-47JYN 18.4
GTEX-ZVT4-1026-SM-57WC4 18.4
GTEX-Y3I4-1526-SM-4TT7K 18.3
GTEX-R55F-1726-SM-2TF4R 18.2
GTEX-12WSM-1726-SM-5BC6J 18.1
GTEX-13D11-1026-SM-5IJFB 18.1
GTEX-Q2AG-0326-SM-48U1O 18.1
GTEX-TKQ1-0226-SM-33HB5 18.1
GTEX-U3ZH-1426-SM-4DXSR 18.1
GTEX-UTHO-1026-SM-3GAF7 18.1
GTEX-VUSG-2226-SM-4KKZO 18.1
GTEX-13113-1726-SM-5GCOO 18.0
GTEX-S341-1526-SM-4AD6K 18.0
GTEX-13OW5-2226-SM-5L3HC 17.9
GTEX-11PRG-0826-SM-5EQ6A 17.8
GTEX-T5JW-2026-SM-4DM63 17.8
GTEX-X4EP-2926-SM-3P5YQ 17.8
GTEX-1399U-1826-SM-5PNZ1 17.7
GTEX-ZVT2-1826-SM-5NQ8W 17.7
GTEX-WOFL-0826-SM-3MJG1 17.6
GTEX-WYBS-0926-SM-3NM94 17.5
GTEX-Y5LM-1726-SM-4VDSX 17.4
GTEX-ZV6S-1826-SM-5NQ8D 17.4
GTEX-XUW1-2326-SM-4BOO5 17.3
GTEX-ZEX8-2226-SM-57WC6 17.3
GTEX-117XS-1926-SM-5GICO 17.2
GTEX-QEG5-0726-SM-4R1JQ 17.2
GTEX-139TU-0626-SM-5KM3X 17.1
GTEX-ZTTD-1026-SM-51MRD 17.1
GTEX-1314G-1226-SM-5BC6D 17.0
GTEX-RWS6-1926-SM-47JXY 17.0
GTEX-TKQ2-1826-SM-33HB2 17.0
GTEX-11EQ9-1826-SM-5Q5AJ 16.9
GTEX-T6MO-0326-SM-32QOK 16.9
GTEX-11P7K-0726-SM-5EGKX 16.8
GTEX-145LT-0726-SM-5S2VM 16.8
GTEX-S32W-2026-SM-4AD6E 16.8
GTEX-WXYG-2226-SM-4E3IM 16.7
GTEX-1269C-2426-SM-5FQSN 16.6
GTEX-13W3W-1226-SM-5LU4H 16.5
GTEX-Y8LW-1626-SM-5IFHX 16.5
GTEX-ZVTK-0326-SM-51MRR 16.5
GTEX-13FHO-0826-SM-5L3E8 16.4
GTEX-ZXES-0826-SM-5E43C 16.4
GTEX-1192X-2326-SM-5987X 16.3
GTEX-11EI6-0626-SM-5985T 16.3
GTEX-146FH-0826-SM-5SI8T 16.3
GTEX-WI4N-1426-SM-3LK7H 16.3
GTEX-XUZC-1626-SM-4BRVP 16.2
GTEX-ZU9S-1926-SM-5NQBP 16.1
GTEX-ZVZQ-0826-SM-51MRF 16.1
GTEX-1211K-1926-SM-5EQLB 16.0
GTEX-13QIC-2326-SM-5LU5N 15.8
GTEX-U3ZN-1926-SM-4DXSG 15.8
GTEX-1117F-2826-SM-5GZXL 15.7
GTEX-13O3O-0826-SM-5K7WE 15.7
GTEX-T5JC-2126-SM-32PMO 15.7
GTEX-ZVE2-1226-SM-5NQ8R 15.7
GTEX-SE5C-2126-SM-4BRUJ 15.6
GTEX-T2YK-2226-SM-32QPT 15.6
GTEX-11GSO-1926-SM-5A5K3 15.5
GTEX-11NV4-2026-SM-5N9DG 15.5
GTEX-12WSB-0626-SM-59HJO 15.5
GTEX-TML8-1226-SM-32QON 15.5
GTEX-Y5V5-2126-SM-4WWFO 15.5
GTEX-11GS4-2126-SM-5A5KR 15.4
GTEX-11TUW-1826-SM-5BC5D 15.4
GTEX-133LE-1726-SM-5K7VQ 15.4
GTEX-13NZ9-1026-SM-5MR5K 15.4
GTEX-R3RS-0626-SM-48FE1 15.4
GTEX-Y3IK-2326-SM-4WWDT 15.4
GTEX-QDT8-0626-SM-48TYW 15.3
GTEX-U412-1826-SM-4DXTJ 15.3
GTEX-11I78-2226-SM-5PNYA 15.2
GTEX-13FTY-2226-SM-5J1ND 15.2
GTEX-X261-0626-SM-3NMD9 15.2
GTEX-YJ8O-2226-SM-5IFHW 15.2
GTEX-ZLFU-2126-SM-4WWEV 15.2
GTEX-ZUA1-1526-SM-59HLS 15.2
GTEX-ZYWO-2326-SM-5GZY4 15.2
GTEX-11OF3-1926-SM-59889 15.1
GTEX-ZAJG-0626-SM-5HL8X 15.1
GTEX-11WQK-2426-SM-5GU5C 15.0
GTEX-144GL-2026-SM-5LU3O 15.0
GTEX-QEL4-2126-SM-447AE 15.0
GTEX-XUJ4-1926-SM-4BOOV 15.0
GTEX-Y9LG-1426-SM-5IFJZ 15.0
GTEX-13CF2-2026-SM-5K7VI 14.9
GTEX-13NZ8-0126-SM-5IJCT 14.9
GTEX-UJHI-1426-SM-3DB9C 14.9
GTEX-Y111-2026-SM-4SOJA 14.9
GTEX-ZDTT-2126-SM-5S2OJ 14.9
GTEX-11NSD-0926-SM-5N9DR 14.8
GTEX-1313W-0826-SM-5EQ4T 14.8
GTEX-13S86-1226-SM-5S2OA 14.8
GTEX-13OW8-0226-SM-5K7UP 14.7
GTEX-R53T-1526-SM-48FEK 14.7
GTEX-REY6-2426-SM-48FF5 14.7
GTEX-S4UY-0726-SM-4AD6X 14.7
GTEX-11DXW-0626-SM-5N9ER 14.6
GTEX-S4Q7-1126-SM-4AD6R 14.6
GTEX-S7SE-0826-SM-4AT4D 14.6
GTEX-11EMC-2026-SM-5A5JV 14.5
GTEX-145MO-0826-SM-5NQBL 14.5
GTEX-11LCK-2426-SM-5HL5F 14.4
GTEX-145ME-1526-SM-5Q5F2 14.4
GTEX-ZYFC-0826-SM-5E44K 14.4
GTEX-11TT1-2126-SM-5GU5Y 14.3
GTEX-WFON-1826-SM-3GILG 14.3
GTEX-11O72-2126-SM-5N9FO 14.2
GTEX-139T8-0826-SM-5L3DE 14.2
GTEX-ZA64-1526-SM-5CVMD 14.2
GTEX-ZLV1-1426-SM-4WWES 14.2
GTEX-RUSQ-2026-SM-4GIAK 14.1
GTEX-S33H-0326-SM-4AD6N 14.1
GTEX-YFC4-1426-SM-5IFJG 14.1
GTEX-12ZZX-1126-SM-5EGKB 14.0
GTEX-YEC3-1026-SM-5IFI5 14.0
GTEX-PSDG-1626-SM-48TCQ 13.9
GTEX-Y114-2026-SM-4TT7L 13.9
GTEX-ZYT6-0126-SM-5E45J 13.9
GTEX-13PL6-2926-SM-5L3I2 13.8
GTEX-X15G-1626-SM-3NMB3 13.8
GTEX-ZC5H-2626-SM-5J2MG 13.8
GTEX-11EM3-1326-SM-5N9C6 13.7
GTEX-ZZ64-1226-SM-5E43R 13.7
GTEX-11P81-1926-SM-5BC53 13.6
GTEX-13O61-1826-SM-5KM4I 13.6
GTEX-11DXY-2326-SM-5GICW 13.5
GTEX-132NY-0826-SM-5K7Y7 13.5
GTEX-145MN-1926-SM-5SIAI 13.5
GTEX-ZYW4-0826-SM-5GIDG 13.5
GTEX-RU72-0626-SM-46MUI 13.4
GTEX-13FTX-1126-SM-5N9EN 13.2
GTEX-144GM-0926-SM-5O994 13.2
GTEX-147F4-2826-SM-5NQBN 13.1
GTEX-14E6E-1326-SM-5S2NR 13.1
GTEX-XGQ4-0926-SM-4AT4U 13.1
GTEX-YFCO-1826-SM-4W1YH 13.1
GTEX-13O3Q-2226-SM-5KM4O 13.0
GTEX-12WSN-1326-SM-5GCNT 12.9
GTEX-13CF3-2126-SM-5IFJP 12.9
GTEX-13N1W-0626-SM-5MR4U 12.9
GTEX-XMD1-0826-SM-4AT52 12.9
GTEX-XQ8I-2426-SM-4WAXY 12.9
GTEX-117YX-1426-SM-5H12H 12.8
GTEX-XQ3S-1326-SM-4BOPQ 12.8
GTEX-QVJO-1826-SM-447C9 12.7
GTEX-U8XE-0826-SM-4E3J1 12.7
GTEX-ZT9W-2026-SM-51MRA 12.7
GTEX-14753-2426-SM-5LU8U 12.6
GTEX-R55D-0826-SM-48FEA 12.6
GTEX-XV7Q-2326-SM-4BRVZ 12.6
GTEX-ZPIC-1126-SM-5BC7F 12.6
GTEX-11ZUS-0826-SM-5FQUY 12.5
GTEX-Y8E4-1626-SM-5S2MW 12.5
GTEX-YB5E-1726-SM-5IFJ3 12.5
GTEX-13NZB-2126-SM-5MR4Y 12.4
GTEX-ZDYS-1126-SM-5K7UB 12.4
GTEX-11ONC-2126-SM-5HL6E 12.3
GTEX-QMRM-1626-SM-4R1KV 12.3
GTEX-Y5V6-2126-SM-4WWFX 12.3
GTEX-ZAB4-2526-SM-5HL8M 12.3
GTEX-13W46-0826-SM-5LU3H 12.2
GTEX-XMD2-0926-SM-4WWEF 12.2
GTEX-12BJ1-1826-SM-5HL9N 12.1
GTEX-XYKS-1326-SM-4BRUN 12.0
GTEX-11DXZ-1926-SM-5GZZL 11.9
GTEX-131YS-0626-SM-5EGKL 11.9
GTEX-13PVQ-1026-SM-5KM3M 11.9
GTEX-14ABY-2126-SM-5QGQZ 11.8
GTEX-X4XY-0926-SM-4E3JD 11.8
GTEX-WY7C-2726-SM-3NB3P 11.5
GTEX-ZQUD-1926-SM-51MSA 11.5
GTEX-14AS3-1626-SM-5S2OY 11.4
GTEX-12KS4-0126-SM-5Q5A5 11.3
GTEX-139T6-1626-SM-5PNYZ 11.3
GTEX-ZDXO-0126-SM-5S2ND 11.3
GTEX-YB5K-1626-SM-5IFIN 11.0
GTEX-ZQG8-0726-SM-5P9H9 10.9
GTEX-11ZTT-2326-SM-5EQLG 10.7
GTEX-11P82-1326-SM-5HL62 10.5
GTEX-131XW-0726-SM-5EGK3 10.5
GTEX-13FTW-1426-SM-5LZWZ 10.2
GTEX-132AR-0826-SM-5EGK6 10.1
GTEX-XMK1-1126-SM-4IHJ8 8.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

27.7

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 27.7
FF:10080-102A8 77 years, female 27.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.