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Field

Term
Gene name

Class

Subclass

Chromosome

External id

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Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

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Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA019472

 

Antibody CAB000075

 

Provider

Atlas Antibodies
Sigma-Aldrich
  DakoCytomation
 

Product name

HPA019472   A0566  

Host species

Rabbit   Rabbit  

Clonality

pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Serum  

Other gene match

   

Released in version

5   1  

References

   

VALIDATION SUMMARY

 
 

Antibody HPA019472

 

Antibody CAB000075

 
Immunohistochemistry


Validated
  Supported  
Western blot

Supported   Uncertain  
Protein array

Supported    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA019472

 

Antibody CAB000075

 

Formal validation: Orthogonal

Validated

Spearman correlation >0.6 for protein and RNA expression in tissues.
   

 

 

   

Figure description

Distribution of protein expression (antibody staining) and RNA expression (TPM) across 37 tissues.    
 

Standard validation

Supported   Supported  

   

Figure description

Immunohistochemical staining of human stomach shows strong positivity in enteroendocrine cells.   Immunohistochemical staining of human pancreas shows strong cytoplasmic positivity in islet cells.  

Expression

RNA: detected in 21 tissues
Protein: detected in 12 cell types
  RNA: detected in 21 tissues
Protein: detected in 7 cell types
 

Retrieval

HIER pH6   HIER pH9  

Antibody dilution

1:700   1:4000  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Consistent with RNA expression data.  
 

Standard validation

Supported    

   

Figure description

Staining in subsets of neuronal cell bodies and dendrites was observed, as well as synaptic positivity in selected brain areas.    

WESTERN BLOT

 
 

Antibody HPA019472

 

Antibody CAB000075

 

Standard validation

Supported

Single band corresponding to the predicted size in kDa (+/-20%).
  Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
 

   

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY420765)
   

Target mass (kDa)

12.7   12.7  

Antibody dilution

1:250   1:500  

PROTEIN ARRAY

 
 

Antibody HPA019472

 

Antibody CAB000075

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

   

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:3000    

ANTIGEN INFORMATION

 
 

Antibody HPA019472

 

Antibody CAB000075

 

Antigen

Recombinant protein fragment   Synthetic peptide  

Length (aa)

83    

Antigen sequence

APSDPRLRQFLQKSLAAAAGKQELAKYFLAELLSEPNQTENDALEPEDLS
QAAEQDEMRLELQRSANSNPAMAPRERKAGCKN
   

Matching transcripts

SST-001 - ENSP00000287641 [100%]
   

Other gene match

   
ANTIGEN VIEW
SST-001
 

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.