Cell atlas - SLC38A10 - The Human Protein Atlas

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SLC38A10

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TISSUE

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CELL

CANCER

CELL ATLAS RNA EXPRESSION HUMAN CELLS CUSTOM DATA

GENE/PROTEIN

Antibody validation

Dictionary
	Golgi apparatus

Human cell
	Golgi Apparatus

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GENERAL INFORMATION
Gene name	SLC38A10
Gene description	Solute carrier family 38, member 10
Protein class	Plasma proteins Predicted intracellular proteins Predicted membrane proteins Transporters
Predicted localization	Intracellular,Membrane
Number of transcripts	6
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HUMAN PROTEIN ATLAS INFORMATION
Summary	Localized to the Golgi apparatus.
RNA cell category	Expressed in all
Protein evidence	Evidence at protein level
Main location	Localized to the Golgi apparatus (validated)

DATA RELIABILITY
Reliability score	Validated based on 2 antibodies. HPA021374 , HPA024631
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ASSAYS

RNA EXPRESSION OVERVIEW
RNA cell line category: Expressed in all Organ Origin Category Expression Alphabetical Cell lines sorted after organ of phenotypic resemblance. Cell lines sorted after biological source for establishment. Cell lines sorted after the cell line category according to Cellosaurus. Cell lines sorted on descending RNA expression. Cell lines sorted alphabetically.

HUMAN CELLS

Summary

Localized to the Golgi apparatus.

Main location

Golgi apparatus (validated)


	Toggle channels	Low High G1 S G2 M N/A

Thumbnail	Antibody	Cell line	Location	Single-cell variation	Cell cycle dependent variation
	HPA021374	A-431	Golgi apparatus
	HPA021374	U-2 OS	Golgi apparatus
	HPA021374	U-251 MG	Golgi apparatus
	HPA024631	A-431	Golgi apparatus
	HPA024631	U-2 OS	Golgi apparatus
	HPA024631	U-251 MG	Golgi apparatus

CUSTOM DATA


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Thumbnail	Antibody	Cell line	Assay	Description
	HPA024631	U-2 OS	Image	Co-localization with the cis-Golgi marker GM130/GOLGA2 (RRID:AB_398141) for a refined protein localization within the Golgi apparatus in U-2 OS cells. SLC38A10 localizes to the Golgi apparatus, but is only detected in the cis-Golgi compartment.

GENE INFORMATION
Gene name	SLC38A10 (HGNC Symbol)
Synonyms	MGC15523, PP1744
Description	Solute carrier family 38, member 10 (HGNC Symbol)
Entrez gene summary
Chromosome	17
Cytoband	q25.3
Chromosome location (bp)	81245000 - 81295547
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000157637 (version 83.38)
Entrez gene	124565
UniProt	Q9HBR0 (UniProt - Evidence at protein level)
neXtProt	NX_Q9HBR0
Antibodypedia	SLC38A10 antibodies

PROTEIN BROWSER

SLC38A10-001	SLC38A10-002	SLC38A10-006	SLC38A10-008	SLC38A10-010	SLC38A10-012

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SLC38A10-001 ENSP00000363891 ENST00000374759	Q9HBR0 [Direct mapping] Putative sodium-coupled neutral amino acid transporter 10 Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003333 [amino acid transmembrane transport] GO:0005794 [Golgi apparatus] GO:0006814 [sodium ion transport] GO:0015171 [amino acid transmembrane transporter activity] GO:0016021 [integral component of membrane] GO:0060348 [bone development] Show all	1119 aa 119.8 kDa	No	>9
SLC38A10-002 ENSP00000288439 ENST00000288439	Q9HBR0 [Direct mapping] Putative sodium-coupled neutral amino acid transporter 10 Show all	Transporters Electrochemical Potential-driven transporters Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based >9TM proteins predicted by MDM Plasma proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003333 [amino acid transmembrane transport] GO:0005794 [Golgi apparatus] GO:0006814 [sodium ion transport] GO:0015171 [amino acid transmembrane transporter activity] GO:0016021 [integral component of membrane] Show all	780 aa 83.3 kDa	No	>9
SLC38A10-006 ENSP00000439115 ENST00000539748	F5H3T4 [Direct mapping] Putative sodium-coupled neutral amino acid transporter 10 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 3TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0003333 [amino acid transmembrane transport] GO:0015171 [amino acid transmembrane transporter activity] GO:0016021 [integral component of membrane] Show all	119 aa 13.2 kDa	No	3
SLC38A10-008 ENSP00000444523 ENST00000543204	H0YGS1 [Direct mapping] Putative sodium-coupled neutral amino acid transporter 10 Show all	MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins SPOCTOPUS predicted secreted proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003333 [amino acid transmembrane transport] GO:0015171 [amino acid transmembrane transporter activity] GO:0016021 [integral component of membrane] Show all	70 aa 8 kDa	No	0
SLC38A10-010 ENSP00000437601 ENST00000540966	H0YF92 [Direct mapping] Putative sodium-coupled neutral amino acid transporter 10 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003333 [amino acid transmembrane transport] GO:0015171 [amino acid transmembrane transporter activity] Show all	299 aa 31.8 kDa	No	0
SLC38A10-012 ENSP00000458273 ENST00000576151	I3L0Q8 [Direct mapping] Putative sodium-coupled neutral amino acid transporter 10 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003333 [amino acid transmembrane transport] GO:0015171 [amino acid transmembrane transporter activity] Show all	258 aa 27.4 kDa	No	0

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.