Fields »
ABOUT
HELP
BLOG
RER1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:109.9TPM
GTEx:18.9RPKM
FANTOM5:71.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody CAB037240

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Not detected
 

Antibody staining

Antibody CAB037240

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Not detected  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

109.9
N/A Female, age 80
Sample 1
TPM: 101.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 83.7
N/A Female, age 57
Sample 3
TPM: 73.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 159.7
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 131.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

18.9

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.5
Samples: 350

Max RPKM: 31.6
Min RPKM: 11.5
Std RPKM: 2.9
Median RPKM: 19.2
GTEX-11EMC-2826-SM-5PNY6 31.6
GTEX-ZYY3-0226-SM-5E45M 31.3
GTEX-ZPIC-1826-SM-57WFE 29.3
GTEX-Y5V6-2526-SM-5IFJV 28.0
GTEX-R55G-2426-SM-2TC5I 27.9
GTEX-ZTPG-0226-SM-5O99I 27.3
GTEX-14BIL-0226-SM-5SI9E 27.1
GTEX-131XE-2426-SM-5EQ5V 26.7
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 18.1
Samples: 227

Max RPKM: 35.3
Min RPKM: 10.3
Std RPKM: 3.2
Median RPKM: 17.7
GTEX-13X6H-1726-SM-5Q5EH 35.3
GTEX-11WQK-1526-SM-5EGKN 29.7
GTEX-1399S-1426-SM-5PNYQ 28.6
GTEX-Y5LM-0826-SM-4VDSW 27.8
GTEX-132QS-0826-SM-5K7WV 25.5
GTEX-132Q8-1726-SM-5EGK8 25.4
GTEX-1122O-0926-SM-5N9C9 25.3
GTEX-ZVT2-0226-SM-5GIE3 24.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

71.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 71.9
FF:10010-101C1 65,65,76 years, mixed 71.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.