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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:297.5TPM
GTEx:53.5RPKM
FANTOM5:1154.7Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA029298

 

Antibody CAB002426

 

Antibody CAB002921

 

Glandular cells

High   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

297.5

overview Male, age 65
Sample 1
TPM: 295.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 328.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 257.5
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 308.8

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

53.5

GTEx sample id

RPKM

9.838.578.70.8172.6020406080100120140160180200220240260280
 
9.838.578.70.8172.6020406080100120140160180200220240260280

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 53.5
Samples: 88

Max RPKM: 291.7
Min RPKM: 0.8
Std RPKM: 53.7
Median RPKM: 38.5
GTEX-Y9LG-1626-SM-5IFHM 291.7
GTEX-YB5E-1526-SM-5IFIE 172.6
GTEX-111YS-1426-SM-5GID8 170.6
GTEX-13113-1226-SM-5EGHT 168.5
GTEX-14DAR-1426-SM-5RQIR 163.0
GTEX-ZPCL-1726-SM-57WEO 151.4
GTEX-ZTSS-0926-SM-59865 144.7
GTEX-11P7K-1626-SM-5GU63 144.2
GTEX-ZLV1-1126-SM-4WWBW 133.7
GTEX-11EQ9-1326-SM-5985X 126.9
GTEX-ZXES-1526-SM-5NQ95 118.6
GTEX-145LT-1026-SM-5LU9O 115.2
GTEX-13D11-0726-SM-5LZZB 112.2
GTEX-11DXX-1626-SM-5H11H 108.8
GTEX-1122O-1326-SM-5H11F 108.1
GTEX-ZTX8-0526-SM-59HLD 106.6
GTEX-ZVZP-1826-SM-5GZXB 96.3
GTEX-YF7O-1826-SM-5IFIU 93.0
GTEX-1399S-2026-SM-5KM4B 85.2
GTEX-11DXZ-1326-SM-5H11X 82.8
GTEX-XUZC-1426-SM-4BRV3 80.1
GTEX-ZZ64-0526-SM-5GZXM 79.8
GTEX-ZYFG-2026-SM-5E43Y 78.3
GTEX-13PL7-2626-SM-5IFH4 78.2
GTEX-131XF-1326-SM-5GCMQ 74.8
GTEX-XBED-1426-SM-4AT4G 71.8
GTEX-XXEK-1026-SM-4BRUW 70.9
GTEX-14E6E-1626-SM-5RQI7 69.1
GTEX-11I78-1126-SM-5A5K5 68.0
GTEX-YEC4-1726-SM-4W21E 67.1
GTEX-11P82-0826-SM-5P9GU 58.2
GTEX-Y114-1426-SM-4TT6W 58.2
GTEX-ZTPG-2626-SM-57WFX 55.9
GTEX-139T6-1026-SM-5IJGC 52.4
GTEX-ZEX8-1826-SM-57WBH 50.2
GTEX-ZLFU-1526-SM-4WWBT 48.6
GTEX-XGQ4-1326-SM-4GIDU 47.2
GTEX-X5EB-1626-SM-4E3IV 47.1
GTEX-1399R-2026-SM-5K7WN 45.6
GTEX-139YR-2226-SM-5IFFW 45.1
GTEX-13FH7-1226-SM-5IJFK 42.6
GTEX-13O61-1326-SM-5KM31 41.6
GTEX-WFJO-0926-SM-4LVM2 40.0
GTEX-ZA64-1226-SM-5HL7B 39.4
GTEX-11NSD-1726-SM-5N9C3 37.5
GTEX-ZPIC-2326-SM-57WDW 36.2
GTEX-13FTW-2026-SM-5IJE2 35.9
GTEX-WFG7-1726-SM-4LVME 34.5
GTEX-ZYWO-1526-SM-5SIAL 30.4
GTEX-133LE-1426-SM-5IFH1 27.7
GTEX-13CF3-1226-SM-5LZXN 27.5
GTEX-VJYA-0926-SM-4KL1N 26.8
GTEX-ZVP2-1726-SM-5GU5P 24.4
GTEX-Y3IK-1726-SM-4YCCR 23.8
GTEX-XAJ8-0526-SM-47JYK 23.5
GTEX-13RTK-0826-SM-5Q5C6 23.2
GTEX-12BJ1-1926-SM-5HL9Z 22.6
GTEX-WQUQ-2426-SM-4MVNW 22.4
GTEX-11XUK-1426-SM-5EQMG 21.0
GTEX-13O21-1026-SM-5IJDU 19.6
GTEX-WH7G-1626-SM-4LVMY 16.5
GTEX-ZVT2-2126-SM-5NQ93 16.0
GTEX-11VI4-1626-SM-5EQKO 12.8
GTEX-145ME-0926-SM-5O9AR 10.8
GTEX-1399U-2126-SM-5IFEZ 10.7
GTEX-Z9EW-0926-SM-5CVMM 9.9
GTEX-12WSK-1526-SM-5CVNO 9.4
GTEX-ZQUD-0926-SM-57WE3 9.1
GTEX-WRHK-1026-SM-4MVOD 8.0
GTEX-X15G-1426-SM-4PQZK 6.7
GTEX-ZF2S-1726-SM-57WFT 6.3
GTEX-13OVI-1926-SM-5IJCG 6.0
GTEX-ZP4G-1626-SM-57WGD 5.8
GTEX-111CU-1326-SM-5NQ8L 5.6
GTEX-13QBU-1926-SM-5IJEW 4.8
GTEX-1192X-2526-SM-59868 3.8
GTEX-XMK1-1826-SM-4B66F 3.5
GTEX-ZQG8-2526-SM-57WEQ 3.5
GTEX-WFG8-1626-SM-4LVMB 3.0
GTEX-117YX-0326-SM-5GICL 2.3
GTEX-131XG-1726-SM-5LZUR 2.1
GTEX-Y5LM-1626-SM-4VDTB 2.0
GTEX-13111-1426-SM-5DUW3 1.8
GTEX-VUSG-1726-SM-4KKZL 1.8
GTEX-UPK5-2026-SM-4JBIM 1.6
GTEX-148VJ-2226-SM-5NQ9M 1.6
GTEX-ZC5H-2326-SM-4WAYT 1.5
GTEX-WEY5-1526-SM-4LMJF 0.8
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

1154.7

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 1154.7
FF:10024-101D6 15,40,85 years, mixed 1154.7

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The Human Protein Atlas project is funded
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