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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:151.8TPM
GTEx:96.3RPKM
FANTOM5:386.2Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Not detected
Fibroblasts:Not available
Adipocytes:Not available
Peripheral nerve:Not available
 
 
 
 

Antibody staining

Antibody HPA004835

  

Antibody HPA073497

  

Antibody CAB009321

  

Antibody CAB075747

  

Chondrocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  

Adipocytes

 Not detected   Not detected  

Peripheral nerve

 Not detected  
          
          
          
       
       
       

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
Chondrocytes:Not available
 
 

Antibody staining

Antibody HPA004835

  

Antibody HPA073497

  

Antibody CAB009321

  

Antibody CAB075747

  

Adipocytes

 Not detected   Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected   Not detected  

Peripheral nerve

 Not detected   Not detected   Not detected   Not detected  

Chondrocytes

 Not detected  
          
       
       
       

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

151.8
N/A Female, age 80
Sample 1
TPM: 118.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 57.5
N/A Female, age 57
Sample 3
TPM: 52.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 243.0
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 287.6
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

96.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 98.7
Samples: 350

Max RPKM: 206.9
Min RPKM: 41.4
Std RPKM: 29.9
Median RPKM: 95.7
GTEX-14E6C-0226-SM-5S2N3 206.9
GTEX-13OW6-0526-SM-5L3HY 205.6
GTEX-111VG-2326-SM-5N9BK 192.8
GTEX-11DXW-0326-SM-5H11W 178.1
GTEX-13CF2-2626-SM-5LZZA 176.7
GTEX-11UD1-0226-SM-5EQKL 176.6
GTEX-13111-1726-SM-5EGJZ 174.8
GTEX-13N11-2626-SM-5K7UQ 174.0
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 92.6
Samples: 227

Max RPKM: 183.4
Min RPKM: 33.7
Std RPKM: 26.2
Median RPKM: 89.6
GTEX-ZVZP-1126-SM-5GICU 183.4
GTEX-WOFM-0726-SM-3MJF8 172.3
GTEX-Y9LG-1226-SM-4VBQA 169.3
GTEX-11EM3-1126-SM-5A5KM 167.1
GTEX-133LE-0926-SM-5P9J1 166.7
GTEX-U8XE-1926-SM-3DB98 165.4
GTEX-13X6H-1726-SM-5Q5EH 159.6
GTEX-X8HC-2326-SM-4QAS4 156.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

386.2

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 386.2
FF:10010-101C1 65,65,76 years, mixed 386.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.