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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:54.8TPM
GTEx:37.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:Not detected
 

Antibody staining

Antibody HPA004835

 

Antibody HPA073497

 

Antibody CAB009321

 

Antibody CAB075747

 

Endothelial cells

Not detected   Medium   Not detected   Low  

Glial cells

Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Not detected   Not detected  

Neuropil

Not detected   Not detected   Not detected   Not detected  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

54.8

N/A Male, age 5
Sample 1
TPM: 32.8
overview Female, age 40
Sample 2
TPM: 58.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 73.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

37.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 45.0
Samples: 114

Max RPKM: 102.7
Min RPKM: 17.6
Std RPKM: 12.3
Median RPKM: 45.2
GTEX-X585-3026-SM-46MWF 102.7
GTEX-T6MN-2626-SM-32PMQ 70.2
GTEX-WL46-2926-SM-3LK82 67.7
GTEX-13NYB-3026-SM-5IJD7 65.7
GTEX-T5JC-2426-SM-3NMDB 64.4
GTEX-145MF-2726-SM-5O995 63.2
GTEX-13FHO-3026-SM-5J1O9 62.0
GTEX-1117F-3226-SM-5N9CT 61.5
GTEX-11OC5-0726-SM-5P9JK 60.8
GTEX-13OW6-3026-SM-5J2MI 59.1
GTEX-11O72-2926-SM-5BC4V 58.3
GTEX-13O3O-3126-SM-5KM3H 58.0
GTEX-1313W-3126-SM-5LZUI 57.8
GTEX-14ASI-3026-SM-5S2PN 57.3
GTEX-13OVH-3026-SM-5MR4N 56.5
GTEX-13VXU-2926-SM-5LU5C 56.5
GTEX-WWYW-3126-SM-3NB39 56.5
GTEX-13FLW-1426-SM-5K7YE 55.7
GTEX-RNOR-2326-SM-2TF4I 55.4
GTEX-132Q8-3026-SM-5PNVG 55.3
GTEX-11ONC-2926-SM-5P9JM 55.0
GTEX-145LS-3126-SM-5Q5BY 54.8
GTEX-TSE9-3026-SM-3DB76 54.6
GTEX-13SLX-3126-SM-5S2Q5 54.5
GTEX-13NYS-3126-SM-5KLYV 54.1
GTEX-13FXS-3126-SM-5J2NN 53.9
GTEX-12ZZY-3026-SM-5GCOU 53.8
GTEX-117XS-3026-SM-5N9CA 53.5
GTEX-11WQK-3026-SM-5EQL6 53.5
GTEX-XLM4-3026-SM-4AT6L 53.5
GTEX-ZYFD-3026-SM-5E44C 52.8
GTEX-QVUS-2826-SM-3GADB 52.3
GTEX-14BMV-3026-SM-5S2PQ 52.0
GTEX-WHSE-3026-SM-3P5ZH 52.0
GTEX-13PVQ-3026-SM-5SI93 51.4
GTEX-YFC4-3126-SM-5PNV6 51.2
GTEX-ZAJG-3126-SM-5HL9J 51.1
GTEX-11ZUS-2926-SM-5FQSL 50.4
GTEX-XOTO-3026-SM-4B65M 49.9
GTEX-QMR6-1426-SM-32PLA 49.8
GTEX-12ZZZ-3026-SM-5BC67 49.0
GTEX-111FC-3126-SM-5GZZ2 48.8
GTEX-13OVJ-2826-SM-5L3GW 48.3
GTEX-1399T-3026-SM-5KLZC 47.9
GTEX-13OW8-2826-SM-5L3GC 47.9
GTEX-12WSC-3026-SM-5GCNF 47.7
GTEX-Y111-2726-SM-4TT3N 47.6
GTEX-1192X-3126-SM-5N9BY 47.2
GTEX-13QIC-2926-SM-5J2NF 47.0
GTEX-11OF3-2926-SM-5HL78 46.9
GTEX-13O3Q-2926-SM-5KM45 46.5
GTEX-131YS-3126-SM-5KLYT 46.0
GTEX-11DXY-3226-SM-5GIDE 45.9
GTEX-11GSO-2926-SM-5HL73 45.8
GTEX-12ZZX-2926-SM-5GCOQ 45.7
GTEX-13S7M-3126-SM-5RQJQ 45.7
GTEX-Q2AG-2926-SM-2HMJ3 45.5
GTEX-X4XX-3026-SM-3NMB2 44.9
GTEX-12WSH-3026-SM-5CVNI 44.8
GTEX-ZVT3-3026-SM-5E43N 44.6
GTEX-11GS4-3126-SM-5A5LH 44.5
GTEX-145MH-3026-SM-5Q5DZ 44.4
GTEX-YJ89-3026-SM-5IFJI 44.4
GTEX-11DXW-1126-SM-5H12Q 43.6
GTEX-12126-1026-SM-5P9JJ 43.4
GTEX-1128S-2726-SM-5H12C 42.8
GTEX-R55F-1326-SM-5S2V4 41.9
GTEX-ZAK1-3026-SM-5S2MJ 41.8
GTEX-ZZPT-3026-SM-5GZXH 41.6
GTEX-13NYC-2826-SM-5K7WR 41.2
GTEX-Z93S-2926-SM-57WB9 41.1
GTEX-WZTO-2926-SM-3NM9I 40.9
GTEX-ZUA1-3026-SM-59HJC 40.8
GTEX-WVLH-3026-SM-3MJG9 40.6
GTEX-144FL-3026-SM-5O99C 40.5
GTEX-13OW7-3026-SM-5L3GY 40.4
GTEX-Y8DK-0826-SM-4TT3T 40.3
GTEX-145MG-3026-SM-5RQJA 40.2
GTEX-N7MT-1126-SM-5SI7V 40.1
GTEX-UTHO-3026-SM-3GAFB 40.1
GTEX-PVOW-2526-SM-2XCF7 39.2
GTEX-T2IS-3026-SM-32QPM 39.2
GTEX-13JVG-3126-SM-5L3FH 38.8
GTEX-QDT8-2926-SM-32PKC 38.8
GTEX-NPJ8-1526-SM-2D7VU 38.2
GTEX-12WSD-3126-SM-5HL7P 37.8
GTEX-13PL6-3126-SM-5LUAR 37.7
GTEX-11EMC-3226-SM-5EGKW 37.3
GTEX-11PRG-2926-SM-5987A 37.0
GTEX-11NUK-2926-SM-5A5MD 36.3
GTEX-OXRN-2426-SM-2I5EQ 36.3
GTEX-144GL-3026-SM-5Q5CW 36.2
GTEX-13FHP-3026-SM-5IJBS 35.9
GTEX-147GR-3026-SM-5S2ML 35.7
GTEX-12ZZW-2926-SM-5LZUP 35.0
GTEX-QVJO-1426-SM-2S1QY 33.8
GTEX-RU72-3026-SM-5SI7Y 32.0
GTEX-13X6J-3026-SM-5Q5CU 31.5
GTEX-11TTK-2926-SM-5PNYP 30.8
GTEX-11GSP-3226-SM-5986O 30.1
GTEX-139T8-1026-SM-5J2MC 28.9
GTEX-13JUV-2926-SM-5LZX7 27.9
GTEX-11EI6-3026-SM-5GZZO 27.4
GTEX-14A5I-2926-SM-5Q5CQ 26.9
GTEX-13X6K-2926-SM-5Q5D5 26.0
GTEX-NPJ7-2726-SM-2I3FT 26.0
GTEX-13G51-3026-SM-5IJB8 24.9
GTEX-1445S-3026-SM-5O9BR 24.6
GTEX-131XW-3126-SM-5LZUC 24.2
GTEX-ZE7O-3126-SM-5HL5X 24.1
GTEX-12WSA-2926-SM-5EQ4D 23.8
GTEX-PWO3-0926-SM-2I5EY 23.3
GTEX-13IVO-2926-SM-5L3CZ 20.9
GTEX-11NV4-2126-SM-5N9DS 17.6
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 30.0
Samples: 108

Max RPKM: 59.6
Min RPKM: 6.9
Std RPKM: 10.8
Median RPKM: 30.4
GTEX-X4EP-0011-R10B-SM-4QASJ 59.6
GTEX-X585-0011-R10A-SM-46MUY 57.8
GTEX-13N1W-0011-R10b-SM-5MR4H 57.3
GTEX-13CZV-0011-R10b-SM-5LZYD 53.1
GTEX-13QJC-0011-R10a-SM-5SI63 50.0
GTEX-13OW7-0011-R10a-SM-5L3H3 48.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 48.8
GTEX-13SLX-0011-R10a-SM-5P9HV 48.8
GTEX-T6MN-0011-R10A-SM-32QP7 47.1
GTEX-13N2G-0011-R10a-SM-5MR34 46.0
GTEX-WWYW-0011-R10A-SM-3NB35 43.4
GTEX-14ASI-0011-R10b-SM-5S2VZ 41.9
GTEX-12WSF-0011-R10a-SM-5LZVH 41.3
GTEX-132Q8-0011-R10b-SM-5DUWZ 40.8
GTEX-13FLV-0011-R10b-SM-5LZZ2 39.9
GTEX-13NYS-0011-R10a-SM-5MR4S 39.9
GTEX-145MH-0011-R10b-SM-5PNUK 39.9
GTEX-13FHO-0011-R10b-SM-5J2MM 39.5
GTEX-13QIC-0011-R10a-SM-5O9C7 39.4
GTEX-13NYB-0011-R10a-SM-5KM43 38.9
GTEX-13OW6-0011-R10a-SM-5L3HE 38.6
GTEX-13FXS-0011-R10a-SM-5J2MA 37.3
GTEX-11H98-0011-R10b-SM-5NQ98 37.2
GTEX-12WSE-0011-R10b-SM-5P9JV 37.2
GTEX-13O3O-0011-R10a-SM-5LUA9 37.2
GTEX-X4XX-0011-R10B-SM-46MWO 37.2
GTEX-NL3H-0011-R10A-SM-2I3E9 37.1
GTEX-12WSH-0011-R10a-SM-5LZUS 36.6
GTEX-S7SE-0011-R10A-SM-2XCDF 36.6
GTEX-T5JC-0011-R10A-SM-32PM2 36.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 35.9
GTEX-WVLH-0011-R10A-SM-3MJFM 35.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 35.6
GTEX-WL46-0011-R10A-SM-3MJFQ 35.2
GTEX-XLM4-0011-R10A-SM-4AT5P 35.2
GTEX-TSE9-0011-R10A-SM-3DB7O 35.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 34.8
GTEX-131XH-0011-R10a-SM-5EGLJ 34.0
GTEX-N7MT-0011-R10A-SM-2I3E1 33.9
GTEX-13OVJ-0011-R10b-SM-5L3HT 33.8
GTEX-QVUS-0011-R10A-SM-3GIK3 33.4
GTEX-1313W-0011-R10b-SM-5DUXA 33.2
GTEX-YFC4-0011-R10a-SM-4SOK5 33.1
GTEX-13OVL-0011-R10a-SM-5L3GS 32.4
GTEX-N7MS-0011-R10A-SM-2HMJK 32.4
GTEX-WZTO-0011-R10B-SM-4E3KB 32.2
GTEX-RVPU-0011-R10A-SM-2XCAH 32.1
GTEX-14BIL-0011-R10a-SM-5SI75 31.7
GTEX-ZDXO-0011-R10a-SM-4WWD8 31.7
GTEX-13O3Q-0011-R10b-SM-5KM39 31.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 31.4
GTEX-11WQK-0011-R10a-SM-5BC6R 31.0
GTEX-13FLW-0011-R10b-SM-5LZZF 30.7
GTEX-145LS-0011-R10a-SM-5PNUQ 30.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 30.1
GTEX-ZF28-0011-R10a-SM-4WWEH 29.8
GTEX-13FTZ-0011-R10b-SM-5KLZS 29.1
GTEX-YJ89-0011-R10a-SM-4SOK9 28.9
GTEX-13X6K-0011-R10a-SM-5P9JR 28.8
GTEX-13G51-0011-R10b-SM-5LZYF 28.5
GTEX-X261-0011-R10B-SM-4E3JT 27.6
GTEX-131YS-0011-R10b-SM-5EQ5N 27.5
GTEX-147GR-0011-R10b-SM-5S2UM 27.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 26.9
GTEX-12WSC-0011-R10a-SM-5GU57 26.4
GTEX-14BIN-0011-R10a-SM-5S2UA 26.4
GTEX-13OW8-0011-R10a-SM-5L3H6 26.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 25.9
GTEX-OXRN-0011-R10A-SM-2I5GC 25.5
GTEX-13S7M-0011-R10b-SM-5PNZB 25.0
GTEX-QMR6-0011-R10A-SM-32PKO 24.9
GTEX-12WSM-0011-R10a-SM-5DUWV 24.4
GTEX-13JUV-0011-R10b-SM-5LZXR 24.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 24.3
GTEX-147F4-0011-R10b-SM-5S2WC 24.1
GTEX-NL4W-0011-R10A-SM-2I3DY 23.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 23.8
GTEX-ZUA1-0011-R10a-SM-51MT6 23.8
GTEX-QDT8-0011-R10A-SM-32PKG 23.1
GTEX-ZVT3-0011-R10b-SM-57WB6 22.5
GTEX-11WQC-0011-R10a-SM-57WCT 22.2
GTEX-P44H-0011-R10A-SM-2XCEK 21.5
GTEX-XMD1-0011-R10A-SM-4AT4A 21.3
GTEX-13X6I-0011-R10a-SM-5PNWI 21.2
GTEX-13X6J-0011-R10b-SM-5PNWA 21.1
GTEX-13SLW-0011-R10a-SM-5S2UI 21.0
GTEX-11ZUS-0011-R10b-SM-5BC79 20.8
GTEX-145LU-0011-R10a-SM-5PNWJ 20.6
GTEX-Z93S-0011-R10a-SM-4RGNM 19.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 19.6
GTEX-145MG-0011-R10a-SM-5PNWG 19.0
GTEX-12WSA-0011-R10b-SM-5P9ET 18.2
GTEX-13JVG-0011-R10b-SM-5KM2P 18.1
GTEX-13IVO-0011-R10a-SM-5LZY3 17.5
GTEX-1477Z-0011-R10b-SM-5S2RF 17.5
GTEX-14753-0011-R10b-SM-5S2WE 17.1
GTEX-13NZA-0011-R10b-SM-5KM54 16.7
GTEX-12126-0011-R10b-SM-5BC6T 15.9
GTEX-12ZZW-0011-R10b-SM-5HL9X 15.8
GTEX-ZXG5-0011-R10a-SM-57WDD 15.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 14.0
GTEX-1445S-0011-R10a-SM-5PNWB 13.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 12.5
GTEX-ZV68-0011-R10a-SM-51MT7 11.9
GTEX-131XW-0011-R10a-SM-5DUVA 11.0
GTEX-OXRO-0011-R10A-SM-2I5EH 10.1
GTEX-12WSD-0011-R10b-SM-5GU79 9.5
GTEX-139TS-0011-R10a-SM-5K7TU 6.9
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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