Tissue expression of SHC1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	35.5	TPM
GTEx:	8.3	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	Not detected
Neuronal cells:	Low
Neuropil:	Medium

Antibody staining	Antibody HPA001844	Antibody CAB005374	Antibody CAB016305
Endothelial cells	Not detected	Not detected	Medium
Glial cells	Not detected	Not detected	Not detected
Neuronal cells	Medium	Medium	Low
Neuropil	Low	Medium	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	35.5

Male, age 5

Sample 1
TPM: 18.6

Female, age 40

Sample 2
TPM: 40.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 47.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	8.3

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 9.5

Samples: 114

Max RPKM: 28.1
Min RPKM: 3.9
Std RPKM: 4.1
Median RPKM: 8.1

GTEX-144FL-3026-SM-5O99C

28.1

GTEX-11WQK-3026-SM-5EQL6

26.8

GTEX-13NYS-3126-SM-5KLYV

24.2

GTEX-13OVJ-2826-SM-5L3GW

23.3

GTEX-NPJ8-1526-SM-2D7VU

19.3

GTEX-13NYC-2826-SM-5K7WR

17.3

GTEX-11OC5-0726-SM-5P9JK

16.4

GTEX-132Q8-3026-SM-5PNVG

16.2

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 7.1

Samples: 108

Max RPKM: 28.4
Min RPKM: 2.3
Std RPKM: 4
Median RPKM: 6

GTEX-13N2G-0011-R10a-SM-5MR34

28.4

GTEX-13OVJ-0011-R10b-SM-5L3HT

23.9

GTEX-X4EP-0011-R10B-SM-4QASJ

21.2

GTEX-NPJ8-0011-R10A-SM-2YUMO

19.0

GTEX-11WQK-0011-R10a-SM-5BC6R

18.6

GTEX-NL4W-0011-R10A-SM-2I3DY

14.1

GTEX-13FHO-0011-R10b-SM-5J2MM

11.9

GTEX-13QJC-0011-R10a-SM-5SI63

11.9

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue