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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:21.3TPM
GTEx:27.2RPKM
FANTOM5:18.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Chondrocytes:High
Fibroblasts:High
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA058265

  

Antibody CAB046486

  

Adipocytes

 Not detected   High  

Chondrocytes

 Not detected   High  

Fibroblasts

 Not detected   High  

Peripheral nerve

 Not detected   Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:High
Peripheral nerve:Not available
Chondrocytes:High
 
 

Antibody staining

Antibody HPA058265

  

Antibody CAB046486

  

Adipocytes

 Not detected   Medium  

Fibroblasts

 Low   High  

Peripheral nerve

 Not detected  

Chondrocytes

 High  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

21.3
N/A Female, age 80
Sample 1
TPM: 27.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 14.4
N/A Female, age 57
Sample 3
TPM: 14.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 26.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 23.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

27.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 29.6
Samples: 350

Max RPKM: 61.2
Min RPKM: 12.9
Std RPKM: 6.6
Median RPKM: 28.8
GTEX-X5EB-2426-SM-4E3HX 61.2
GTEX-XBEC-0326-SM-4AT4M 55.5
GTEX-OXRO-0226-SM-3LK6F 50.9
GTEX-X8HC-0226-SM-4E3K1 49.0
GTEX-14BIL-0226-SM-5SI9E 47.7
GTEX-13PLJ-0126-SM-5L3HU 46.4
GTEX-11GSO-2326-SM-5A5LX 46.0
GTEX-148VI-1726-SM-5S2W9 45.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 23.4
Samples: 227

Max RPKM: 44.9
Min RPKM: 10
Std RPKM: 5.8
Median RPKM: 22.5
GTEX-XLM4-1026-SM-4AT51 44.9
GTEX-139TU-1426-SM-5LZY9 43.1
GTEX-13O3P-0926-SM-5IFFI 39.6
GTEX-XBEC-1826-SM-4QASN 37.3
GTEX-13N1W-1226-SM-5K7UM 36.8
GTEX-YECK-1426-SM-5IFHE 36.8
GTEX-X8HC-2326-SM-4QAS4 36.7
GTEX-ZYW4-2226-SM-5GZYG 36.5
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

18.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 18.3
FF:10010-101C1 65,65,76 years, mixed 18.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.