We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
DVL3
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:12.0RPKM
FANTOM5:30.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA058265

 

Antibody CAB046486

 

Glial cells

Not detected   Medium  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

12.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 12.0
Samples: 117

Max RPKM: 18
Min RPKM: 5.7
Std RPKM: 2.4
Median RPKM: 12.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 18.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 17.9
GTEX-P44H-0011-R5A-SM-2XCEX 17.9
GTEX-QMR6-0011-R5A-SM-32PKT 16.7
GTEX-XMD1-0011-R5A-SM-4AT47 16.5
GTEX-11GSP-0011-R5a-SM-57WBE 15.8
GTEX-RVPV-0011-R5A-SM-2TF69 15.3
GTEX-132Q8-0011-R5a-SM-5IJDM 15.2
GTEX-13OW6-0011-R5a-SM-5O9BK 15.2
GTEX-11H98-0011-R5b-SM-57WCF 14.5
GTEX-13FXS-0011-R5b-SM-5LZYE 14.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 14.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 14.5
GTEX-13G51-0011-R5a-SM-5L3EB 14.4
GTEX-13SLX-0011-R5a-SM-5O9BV 14.4
GTEX-13O3O-0011-R5b-SM-5KM44 14.3
GTEX-WVLH-0011-R5A-SM-3MJFW 14.3
GTEX-X585-0011-R5A-SM-46MVI 14.3
GTEX-12WSF-0011-R5a-SM-5HL8K 14.2
GTEX-OHPN-0011-R5A-SM-2I5FF 14.2
GTEX-R55E-0011-R5A-SM-2TC5N 14.2
GTEX-13NYS-0011-R5a-SM-5MR4D 14.1
GTEX-WL46-0011-R5A-SM-3LK6V 14.1
GTEX-N7MS-0011-R5a-SM-2HMK8 14.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 13.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 13.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 13.8
GTEX-13FLW-0011-R5a-SM-5LZX6 13.8
GTEX-13X6I-0011-R5a-SM-5PNWW 13.7
GTEX-T5JC-0011-R5A-SM-32PLK 13.6
GTEX-WWYW-0011-R5A-SM-3NB3E 13.6
GTEX-X4XX-0011-R5A-SM-46MWN 13.6
GTEX-13JVG-0011-R5a-SM-5MR4O 13.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 13.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 13.5
GTEX-13VXU-0011-R5a-SM-5O9D7 13.5
GTEX-14ABY-0011-R5b-SM-5SI7B 13.5
GTEX-WZTO-0011-R5B-SM-3NMC5 13.5
GTEX-131YS-0011-R5b-SM-5K7YB 13.4
GTEX-QVJO-0011-R5A-SM-2S1QM 13.4
GTEX-13OVL-0011-R5b-SM-5L3FU 13.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 13.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 13.0
GTEX-UTHO-0011-R5A-SM-3GIJD 13.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 12.8
GTEX-11NV4-0011-R5a-SM-5NQ88 12.7
GTEX-13X6K-0011-R5b-SM-5PNUE 12.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 12.6
GTEX-T6MN-0011-R5A-SM-32QPD 12.6
GTEX-RVPU-0011-R5A-SM-2XCAD 12.5
GTEX-14BIM-0011-R5b-SM-5S2RM 12.4
GTEX-PVOW-0011-R5A-SM-32PL7 12.4
GTEX-XOTO-0011-R5A-SM-4B657 12.4
GTEX-13FLV-0011-R5a-SM-5LZWT 12.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 12.3
GTEX-13CZV-0011-R5a-SM-5K7XA 12.2
GTEX-11OF3-0011-R5a-SM-57WB4 12.1
GTEX-13NYB-0011-R5a-SM-5MR45 12.1
GTEX-13OW7-0011-R5b-SM-5O9DM 12.1
GTEX-145MH-0011-R5a-SM-5P9JT 12.1
GTEX-ZE7O-0011-R5a-SM-57WBO 12.1
GTEX-N7MT-0011-R5a-SM-2I3G6 12.0
GTEX-13S7M-0011-R5b-SM-5P9HS 11.9
GTEX-NL4W-0011-R5a-SM-2I3GD 11.9
GTEX-12WSB-0011-R5b-SM-5GU67 11.8
GTEX-1313W-0011-R5b-SM-5L3EP 11.8
GTEX-RU72-0011-R5A-SM-2TF6U 11.8
GTEX-1399T-0011-R5b-SM-5IJDK 11.6
GTEX-13OVH-0011-R5b-SM-5KM4L 11.6
GTEX-S7SE-0011-R5A-SM-2XCDA 11.6
GTEX-139TS-0011-R5b-SM-5J2MZ 11.5
GTEX-13JUV-0011-R5a-SM-5LZY5 11.5
GTEX-13OW5-0011-R5b-SM-5L3FR 11.4
GTEX-145LS-0011-R5a-SM-5SI65 11.4
GTEX-TSE9-0011-R5A-SM-3DB7J 11.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 11.4
GTEX-139TT-0011-R5b-SM-5K7W8 11.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 11.3
GTEX-12WSD-0011-R5b-SM-5CVNG 11.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 11.2
GTEX-YFC4-0011-R5a-SM-4RGLR 11.1
GTEX-NL3H-0011-R5a-SM-2I3GB 11.0
GTEX-ZUA1-0011-R5b-SM-51MTG 11.0
GTEX-12WSA-0011-R5b-SM-5GU5I 10.9
GTEX-13X6J-0011-R5b-SM-5PNWT 10.9
GTEX-12WSC-0011-R5b-SM-5CVNS 10.7
GTEX-144GO-0011-R5a-SM-5PNUR 10.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 10.6
GTEX-X261-0011-R5A-SM-3NMB4 10.6
GTEX-Z93S-0011-R5b-SM-4RGNI 10.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 10.4
GTEX-1445S-0011-R5a-SM-5PNUS 10.4
GTEX-12ZZX-0011-R5a-SM-5HL89 10.3
GTEX-139T8-0011-R5b-SM-5J1MO 10.1
GTEX-144GL-0011-R5b-SM-5PNUJ 10.0
GTEX-14BIN-0011-R5b-SM-5SI78 10.0
GTEX-ZXG5-0011-R5b-SM-57WBN 10.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 9.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 9.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 9.1
GTEX-13CIG-0011-R5b-SM-5L3F2 9.0
GTEX-13112-0011-R5b-SM-5DUV8 8.9
GTEX-11WQC-0011-R5a-SM-5BC74 8.6
GTEX-NPJ7-0011-R5a-SM-33HBK 8.6
GTEX-ZVT3-0011-R5a-SM-51MSI 8.6
GTEX-11UD1-0011-R5b-SM-5P9FP 8.5
GTEX-ZV68-0011-R5a-SM-4YCDW 8.5
GTEX-13FHP-0011-R5b-SM-5LZY2 8.3
GTEX-OXRN-0011-R5A-SM-2I5EF 8.2
GTEX-12WSH-0011-R5b-SM-5P9F3 7.8
GTEX-YJ89-0011-R5a-SM-4V6GM 7.7
GTEX-S7PM-0011-R5A-SM-3NM8G 7.4
GTEX-T2IS-0011-R5A-SM-32QP4 7.4
GTEX-1477Z-0011-R5b-SM-5PNUO 6.7
GTEX-13CF2-0011-R5a-SM-5LZWS 6.5
GTEX-145MG-0011-R5b-SM-5S2VU 5.9
GTEX-13NZA-0011-R5b-SM-5KM4K 5.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

30.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 30.7
FF:10164-103B2 76 years, female 37.8
FF:10379-105H1 89 years, female 23.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.