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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:50.1TPM
GTEx:13.2RPKM
FANTOM5:57.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
Chondrocytes:Medium
 
 

Antibody staining

Antibody HPA043036

  

Antibody HPA047754

  

Antibody CAB015425

  

Adipocytes

 Medium   Not detected   High  

Fibroblasts

 Not detected   Not detected   High  

Peripheral nerve

 Not detected   Not detected  

Chondrocytes

 Low   Medium  
        
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA043036

  

Antibody HPA047754

  

Antibody CAB015425

  

Adipocytes

 Medium   Not detected   High  

Fibroblasts

 Not detected   Not detected   Medium  

Peripheral nerve

 Not detected   High  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

50.1
N/A Female, age 80
Sample 1
TPM: 61.4
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 39.6
N/A Female, age 57
Sample 3
TPM: 35.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 61.2
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 53.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

13.2

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 12.9
Samples: 350

Max RPKM: 22.4
Min RPKM: 7.8
Std RPKM: 2.5
Median RPKM: 12.5
GTEX-Y3IK-2526-SM-4WWDM 22.4
GTEX-13RTJ-2526-SM-5S2Q3 21.6
GTEX-12C56-1626-SM-5FQUO 20.3
GTEX-11EMC-2826-SM-5PNY6 19.8
GTEX-13O61-2426-SM-5J1NV 19.4
GTEX-QESD-1526-SM-2S1QT 19.4
GTEX-ZYFD-0226-SM-5NQ86 19.3
GTEX-11DZ1-0226-SM-5A5KF 19.2
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 13.7
Samples: 227

Max RPKM: 24
Min RPKM: 7.2
Std RPKM: 2.9
Median RPKM: 13.2
GTEX-ZYVF-1026-SM-5E44V 24.0
GTEX-Y114-1326-SM-4TT9A 23.7
GTEX-11EM3-1126-SM-5A5KM 23.5
GTEX-11WQK-1526-SM-5EGKN 22.2
GTEX-13IVO-2426-SM-5K7V9 22.2
GTEX-ZAJG-1626-SM-5HL7I 21.6
GTEX-132QS-0826-SM-5K7WV 21.2
GTEX-11EQ9-1126-SM-5987I 20.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

57.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 57.0
FF:10010-101C1 65,65,76 years, mixed 57.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.