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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:108.1TPM
GTEx:87.7RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Not detected
Neuropil:High
 

Antibody staining

Antibody HPA011917

 

Endothelial cells

Not detected  

Glial cells

Not detected  

Neuronal cells

Not detected  

Neuropil

High  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

108.1

N/A Male, age 5
Sample 1
TPM: 139.2
overview Female, age 40
Sample 2
TPM: 73.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 111.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

87.7

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 96.5
Samples: 114

Max RPKM: 154.4
Min RPKM: 37.4
Std RPKM: 26.3
Median RPKM: 99.1
GTEX-13G51-3026-SM-5IJB8 154.4
GTEX-12ZZY-3026-SM-5GCOU 154.1
GTEX-13OW8-2826-SM-5L3GC 145.1
GTEX-X585-3026-SM-46MWF 142.8
GTEX-1192X-3126-SM-5N9BY 140.8
GTEX-11GS4-3126-SM-5A5LH 140.6
GTEX-13SLX-3126-SM-5S2Q5 139.8
GTEX-WHSE-3026-SM-3P5ZH 139.5
GTEX-13FXS-3126-SM-5J2NN 133.3
GTEX-11ONC-2926-SM-5P9JM 132.8
GTEX-117XS-3026-SM-5N9CA 131.1
GTEX-11OF3-2926-SM-5HL78 131.0
GTEX-T5JC-2426-SM-3NMDB 129.9
GTEX-1313W-3126-SM-5LZUI 129.4
GTEX-XLM4-3026-SM-4AT6L 129.2
GTEX-ZYFD-3026-SM-5E44C 127.0
GTEX-WL46-2926-SM-3LK82 126.0
GTEX-13NYC-2826-SM-5K7WR 124.2
GTEX-13NYB-3026-SM-5IJD7 123.6
GTEX-T6MN-2626-SM-32PMQ 123.2
GTEX-13OW6-3026-SM-5J2MI 122.6
GTEX-13FHO-3026-SM-5J1O9 118.7
GTEX-12ZZX-2926-SM-5GCOQ 116.6
GTEX-131YS-3126-SM-5KLYT 115.9
GTEX-145LS-3126-SM-5Q5BY 115.7
GTEX-145MF-2726-SM-5O995 115.7
GTEX-13OVH-3026-SM-5MR4N 115.1
GTEX-14BMV-3026-SM-5S2PQ 114.5
GTEX-11DXW-1126-SM-5H12Q 114.1
GTEX-11NUK-2926-SM-5A5MD 112.5
GTEX-YJ89-3026-SM-5IFJI 112.3
GTEX-111FC-3126-SM-5GZZ2 110.0
GTEX-11GSO-2926-SM-5HL73 109.3
GTEX-XOTO-3026-SM-4B65M 109.1
GTEX-ZVT3-3026-SM-5E43N 108.1
GTEX-X4XX-3026-SM-3NMB2 107.8
GTEX-N7MT-1126-SM-5SI7V 107.7
GTEX-13PVQ-3026-SM-5SI93 107.6
GTEX-13FHP-3026-SM-5IJBS 107.3
GTEX-145MG-3026-SM-5RQJA 107.3
GTEX-13NYS-3126-SM-5KLYV 107.2
GTEX-WZTO-2926-SM-3NM9I 106.3
GTEX-RNOR-2326-SM-2TF4I 104.2
GTEX-ZAJG-3126-SM-5HL9J 104.2
GTEX-1117F-3226-SM-5N9CT 104.1
GTEX-13VXU-2926-SM-5LU5C 103.8
GTEX-Z93S-2926-SM-57WB9 103.6
GTEX-13QIC-2926-SM-5J2NF 103.5
GTEX-12126-1026-SM-5P9JJ 102.7
GTEX-13FLW-1426-SM-5K7YE 102.2
GTEX-Q2AG-2926-SM-2HMJ3 101.6
GTEX-12WSC-3026-SM-5GCNF 101.5
GTEX-1399T-3026-SM-5KLZC 101.4
GTEX-13O3O-3126-SM-5KM3H 100.9
GTEX-YFC4-3126-SM-5PNV6 100.9
GTEX-WVLH-3026-SM-3MJG9 99.5
GTEX-11DXY-3226-SM-5GIDE 99.1
GTEX-ZUA1-3026-SM-59HJC 99.1
GTEX-14ASI-3026-SM-5S2PN 98.6
GTEX-WWYW-3126-SM-3NB39 98.2
GTEX-11ZUS-2926-SM-5FQSL 97.3
GTEX-NPJ8-1526-SM-2D7VU 97.1
GTEX-RU72-3026-SM-5SI7Y 96.5
GTEX-145MH-3026-SM-5Q5DZ 96.1
GTEX-11PRG-2926-SM-5987A 94.9
GTEX-12WSD-3126-SM-5HL7P 94.9
GTEX-Y111-2726-SM-4TT3N 93.4
GTEX-13O3Q-2926-SM-5KM45 92.4
GTEX-11OC5-0726-SM-5P9JK 92.2
GTEX-R55F-1326-SM-5S2V4 90.3
GTEX-ZAK1-3026-SM-5S2MJ 90.0
GTEX-11O72-2926-SM-5BC4V 89.5
GTEX-12ZZZ-3026-SM-5BC67 89.4
GTEX-13OVJ-2826-SM-5L3GW 88.8
GTEX-TSE9-3026-SM-3DB76 88.1
GTEX-QVJO-1426-SM-2S1QY 87.2
GTEX-T2IS-3026-SM-32QPM 86.5
GTEX-11EI6-3026-SM-5GZZO 84.3
GTEX-132Q8-3026-SM-5PNVG 84.0
GTEX-13PL6-3126-SM-5LUAR 83.1
GTEX-Y8DK-0826-SM-4TT3T 82.1
GTEX-1128S-2726-SM-5H12C 81.8
GTEX-144GL-3026-SM-5Q5CW 81.6
GTEX-12WSH-3026-SM-5CVNI 80.8
GTEX-QDT8-2926-SM-32PKC 80.4
GTEX-13S7M-3126-SM-5RQJQ 79.9
GTEX-14A5I-2926-SM-5Q5CQ 79.6
GTEX-13JVG-3126-SM-5L3FH 79.0
GTEX-QVUS-2826-SM-3GADB 78.2
GTEX-QMR6-1426-SM-32PLA 76.2
GTEX-ZE7O-3126-SM-5HL5X 74.8
GTEX-PVOW-2526-SM-2XCF7 72.9
GTEX-12ZZW-2926-SM-5LZUP 71.9
GTEX-131XW-3126-SM-5LZUC 71.1
GTEX-13OW7-3026-SM-5L3GY 69.8
GTEX-11WQK-3026-SM-5EQL6 69.4
GTEX-11EMC-3226-SM-5EGKW 67.7
GTEX-UTHO-3026-SM-3GAFB 67.0
GTEX-NPJ7-2726-SM-2I3FT 63.3
GTEX-13X6J-3026-SM-5Q5CU 62.5
GTEX-144FL-3026-SM-5O99C 62.0
GTEX-147GR-3026-SM-5S2ML 59.2
GTEX-ZZPT-3026-SM-5GZXH 57.4
GTEX-1445S-3026-SM-5O9BR 57.0
GTEX-11GSP-3226-SM-5986O 56.3
GTEX-OXRN-2426-SM-2I5EQ 55.4
GTEX-139T8-1026-SM-5J2MC 53.9
GTEX-13JUV-2926-SM-5LZX7 51.2
GTEX-13X6K-2926-SM-5Q5D5 50.2
GTEX-11NV4-2126-SM-5N9DS 46.9
GTEX-11TTK-2926-SM-5PNYP 41.3
GTEX-13IVO-2926-SM-5L3CZ 40.1
GTEX-PWO3-0926-SM-2I5EY 40.1
GTEX-12WSA-2926-SM-5EQ4D 37.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 78.4
Samples: 108

Max RPKM: 133.5
Min RPKM: 28.6
Std RPKM: 25.7
Median RPKM: 82.3
GTEX-13N1W-0011-R10b-SM-5MR4H 133.5
GTEX-X585-0011-R10A-SM-46MUY 125.7
GTEX-13CZV-0011-R10b-SM-5LZYD 125.0
GTEX-13SLX-0011-R10a-SM-5P9HV 119.5
GTEX-12ZZX-0011-R10b-SM-5DUWK 119.4
GTEX-13NYS-0011-R10a-SM-5MR4S 119.1
GTEX-X4EP-0011-R10B-SM-4QASJ 116.5
GTEX-13OW7-0011-R10a-SM-5L3H3 116.1
GTEX-131XH-0011-R10a-SM-5EGLJ 113.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 112.6
GTEX-12WSF-0011-R10a-SM-5LZVH 108.6
GTEX-XLM4-0011-R10A-SM-4AT5P 107.3
GTEX-X4XX-0011-R10B-SM-46MWO 107.0
GTEX-13FLW-0011-R10b-SM-5LZZF 104.9
GTEX-13OW6-0011-R10a-SM-5L3HE 104.8
GTEX-13O3Q-0011-R10b-SM-5KM39 104.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 104.1
GTEX-WZTO-0011-R10B-SM-4E3KB 103.8
GTEX-1313W-0011-R10b-SM-5DUXA 103.2
GTEX-NL3H-0011-R10A-SM-2I3E9 103.1
GTEX-T5JC-0011-R10A-SM-32PM2 103.1
GTEX-ZF28-0011-R10a-SM-4WWEH 102.1
GTEX-13X6K-0011-R10a-SM-5P9JR 102.0
GTEX-12WSH-0011-R10a-SM-5LZUS 101.1
GTEX-WVLH-0011-R10A-SM-3MJFM 100.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 100.5
GTEX-T6MN-0011-R10A-SM-32QP7 100.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 97.8
GTEX-WWYW-0011-R10A-SM-3NB35 97.7
GTEX-14BIL-0011-R10a-SM-5SI75 97.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 96.6
GTEX-12WSE-0011-R10b-SM-5P9JV 95.9
GTEX-13QIC-0011-R10a-SM-5O9C7 95.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 95.3
GTEX-131YS-0011-R10b-SM-5EQ5N 94.3
GTEX-13S7M-0011-R10b-SM-5PNZB 90.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 90.6
GTEX-13O3O-0011-R10a-SM-5LUA9 90.6
GTEX-YFC4-0011-R10a-SM-4SOK5 89.7
GTEX-WL46-0011-R10A-SM-3MJFQ 89.6
GTEX-14BIN-0011-R10a-SM-5S2UA 89.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 89.3
GTEX-N7MT-0011-R10A-SM-2I3E1 89.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 89.2
GTEX-145MH-0011-R10b-SM-5PNUK 88.6
GTEX-13OVL-0011-R10a-SM-5L3GS 87.0
GTEX-S7SE-0011-R10A-SM-2XCDF 87.0
GTEX-13FHO-0011-R10b-SM-5J2MM 86.9
GTEX-145MG-0011-R10a-SM-5PNWG 86.1
GTEX-YJ89-0011-R10a-SM-4SOK9 86.1
GTEX-ZVT3-0011-R10b-SM-57WB6 84.0
GTEX-145LS-0011-R10a-SM-5PNUQ 83.8
GTEX-QVJO-0011-R10A-SM-2S1QJ 83.8
GTEX-Z93S-0011-R10a-SM-4RGNM 82.6
GTEX-N7MS-0011-R10A-SM-2HMJK 81.9
GTEX-147GR-0011-R10b-SM-5S2UM 81.8
GTEX-11H98-0011-R10b-SM-5NQ98 81.2
GTEX-12WSM-0011-R10a-SM-5DUWV 81.1
GTEX-ZAB4-0011-R10a-SM-4SOKH 79.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 78.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 77.9
GTEX-13FXS-0011-R10a-SM-5J2MA 77.5
GTEX-XMD1-0011-R10A-SM-4AT4A 76.9
GTEX-12WSC-0011-R10a-SM-5GU57 76.7
GTEX-13NYB-0011-R10a-SM-5KM43 74.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 74.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 72.4
GTEX-13X6J-0011-R10b-SM-5PNWA 71.3
GTEX-NPJ7-0011-R10A-SM-2I3E5 69.8
GTEX-147F4-0011-R10b-SM-5S2WC 69.5
GTEX-13OW8-0011-R10a-SM-5L3H6 67.5
GTEX-RVPU-0011-R10A-SM-2XCAH 67.5
GTEX-13JUV-0011-R10b-SM-5LZXR 65.4
GTEX-13G51-0011-R10b-SM-5LZYF 64.1
GTEX-11WQC-0011-R10a-SM-57WCT 63.0
GTEX-145LU-0011-R10a-SM-5PNWJ 62.2
GTEX-13X6I-0011-R10a-SM-5PNWI 61.7
GTEX-QDT8-0011-R10A-SM-32PKG 59.7
GTEX-ZUA1-0011-R10a-SM-51MT6 58.7
GTEX-12126-0011-R10b-SM-5BC6T 58.6
GTEX-TSE9-0011-R10A-SM-3DB7O 58.2
GTEX-13SLW-0011-R10a-SM-5S2UI 58.1
GTEX-OXRN-0011-R10A-SM-2I5GC 55.4
GTEX-QMR6-0011-R10A-SM-32PKO 54.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 54.5
GTEX-13NZA-0011-R10b-SM-5KM54 54.3
GTEX-13JVG-0011-R10b-SM-5KM2P 52.7
GTEX-13OVJ-0011-R10b-SM-5L3HT 52.1
GTEX-12WSD-0011-R10b-SM-5GU79 51.8
GTEX-P44H-0011-R10A-SM-2XCEK 45.6
GTEX-13QJC-0011-R10a-SM-5SI63 45.3
GTEX-X261-0011-R10B-SM-4E3JT 44.6
GTEX-ZXG5-0011-R10a-SM-57WDD 44.5
GTEX-QVUS-0011-R10A-SM-3GIK3 44.3
GTEX-NL4W-0011-R10A-SM-2I3DY 42.2
GTEX-139TS-0011-R10a-SM-5K7TU 40.3
GTEX-11WQK-0011-R10a-SM-5BC6R 39.4
GTEX-12WSA-0011-R10b-SM-5P9ET 38.2
GTEX-13N2G-0011-R10a-SM-5MR34 37.0
GTEX-12ZZW-0011-R10b-SM-5HL9X 36.8
GTEX-1477Z-0011-R10b-SM-5S2RF 36.1
GTEX-13IVO-0011-R10a-SM-5LZY3 35.9
GTEX-11ZUS-0011-R10b-SM-5BC79 34.7
GTEX-1445S-0011-R10a-SM-5PNWB 34.5
GTEX-ZV68-0011-R10a-SM-51MT7 34.2
GTEX-131XW-0011-R10a-SM-5DUVA 33.9
GTEX-14753-0011-R10b-SM-5S2WE 32.6
GTEX-OXRO-0011-R10A-SM-2I5EH 28.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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