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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:216.4TPM
GTEx:64.0RPKM
FANTOM5:604.0Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA038764

 

Antibody HPA038765

 

Antibody HPA051699

 

Glandular cells

Not detected   High   High  
     
     
     

SMALL INTESTINE - HPA RNA-seq

Average TPM

216.4

overview Male, age 65
Sample 1
TPM: 147.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 126.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 288.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 303.0

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

64.0

GTEx sample id

RPKM

9.252.5112.00.0230.0020406080100120140160180200220
 
9.252.5112.00.0230.0020406080100120140160180200220

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 64.0
Samples: 88

Max RPKM: 230
Min RPKM: 0
Std RPKM: 56
Median RPKM: 52.5
GTEX-13FTW-2026-SM-5IJE2 230.0
GTEX-13D11-0726-SM-5LZZB 184.0
GTEX-1122O-1326-SM-5H11F 173.9
GTEX-XXEK-1026-SM-4BRUW 156.6
GTEX-13CF3-1226-SM-5LZXN 155.1
GTEX-14DAR-1426-SM-5RQIR 148.9
GTEX-ZPCL-1726-SM-57WEO 146.5
GTEX-YF7O-1826-SM-5IFIU 140.7
GTEX-YEC4-1726-SM-4W21E 139.5
GTEX-ZVT2-2126-SM-5NQ93 139.1
GTEX-111YS-1426-SM-5GID8 133.3
GTEX-145LT-1026-SM-5LU9O 133.0
GTEX-XGQ4-1326-SM-4GIDU 131.3
GTEX-ZLV1-1126-SM-4WWBW 130.8
GTEX-ZTSS-0926-SM-59865 128.7
GTEX-ZVZP-1826-SM-5GZXB 127.2
GTEX-Y9LG-1626-SM-5IFHM 126.8
GTEX-ZYFG-2026-SM-5E43Y 126.4
GTEX-11DXX-1626-SM-5H11H 125.0
GTEX-14E6E-1626-SM-5RQI7 116.4
GTEX-ZA64-1226-SM-5HL7B 114.3
GTEX-1399S-2026-SM-5KM4B 112.9
GTEX-ZPIC-2326-SM-57WDW 111.7
GTEX-YB5E-1526-SM-5IFIE 110.4
GTEX-11P82-0826-SM-5P9GU 105.6
GTEX-ZZ64-0526-SM-5GZXM 103.2
GTEX-ZVP2-1726-SM-5GU5P 98.9
GTEX-ZYWO-1526-SM-5SIAL 95.7
GTEX-13FH7-1226-SM-5IJFK 95.6
GTEX-11EQ9-1326-SM-5985X 95.0
GTEX-ZTX8-0526-SM-59HLD 93.0
GTEX-13PL7-2626-SM-5IFH4 90.2
GTEX-11I78-1126-SM-5A5K5 81.7
GTEX-X5EB-1626-SM-4E3IV 80.7
GTEX-133LE-1426-SM-5IFH1 78.9
GTEX-ZXES-1526-SM-5NQ95 74.6
GTEX-XUZC-1426-SM-4BRV3 71.1
GTEX-XBED-1426-SM-4AT4G 70.0
GTEX-WFJO-0926-SM-4LVM2 63.0
GTEX-139T6-1026-SM-5IJGC 60.9
GTEX-13113-1226-SM-5EGHT 60.4
GTEX-ZTPG-2626-SM-57WFX 55.4
GTEX-VJYA-0926-SM-4KL1N 55.3
GTEX-13O61-1326-SM-5KM31 52.6
GTEX-XAJ8-0526-SM-47JYK 52.4
GTEX-131XF-1326-SM-5GCMQ 51.2
GTEX-11P7K-1626-SM-5GU63 50.9
GTEX-WQUQ-2426-SM-4MVNW 45.8
GTEX-11DXZ-1326-SM-5H11X 45.1
GTEX-ZEX8-1826-SM-57WBH 39.9
GTEX-Y114-1426-SM-4TT6W 38.7
GTEX-1399U-2126-SM-5IFEZ 37.4
GTEX-12BJ1-1926-SM-5HL9Z 36.9
GTEX-WH7G-1626-SM-4LVMY 31.2
GTEX-WFG7-1726-SM-4LVME 29.4
GTEX-ZLFU-1526-SM-4WWBT 25.6
GTEX-11NSD-1726-SM-5N9C3 23.9
GTEX-Z9EW-0926-SM-5CVMM 23.3
GTEX-11XUK-1426-SM-5EQMG 21.7
GTEX-13RTK-0826-SM-5Q5C6 20.9
GTEX-139YR-2226-SM-5IFFW 19.8
GTEX-1399R-2026-SM-5K7WN 17.3
GTEX-13O21-1026-SM-5IJDU 14.6
GTEX-Y3IK-1726-SM-4YCCR 12.1
GTEX-11VI4-1626-SM-5EQKO 10.5
GTEX-111CU-1326-SM-5NQ8L 9.4
GTEX-WRHK-1026-SM-4MVOD 8.6
GTEX-WFG8-1626-SM-4LVMB 5.5
GTEX-13OVI-1926-SM-5IJCG 5.5
GTEX-X15G-1426-SM-4PQZK 4.0
GTEX-145ME-0926-SM-5O9AR 3.8
GTEX-12WSK-1526-SM-5CVNO 3.7
GTEX-ZQUD-0926-SM-57WE3 3.4
GTEX-ZF2S-1726-SM-57WFT 3.3
GTEX-VUSG-1726-SM-4KKZL 2.1
GTEX-131XG-1726-SM-5LZUR 1.8
GTEX-13QBU-1926-SM-5IJEW 1.8
GTEX-ZP4G-1626-SM-57WGD 1.6
GTEX-Y5LM-1626-SM-4VDTB 1.1
GTEX-XMK1-1826-SM-4B66F 0.9
GTEX-ZQG8-2526-SM-57WEQ 0.6
GTEX-117YX-0326-SM-5GICL 0.6
GTEX-148VJ-2226-SM-5NQ9M 0.4
GTEX-WEY5-1526-SM-4LMJF 0.3
GTEX-13111-1426-SM-5DUW3 0.3
GTEX-1192X-2526-SM-59868 0.2
GTEX-ZC5H-2326-SM-4WAYT 0.0
GTEX-UPK5-2026-SM-4JBIM 0.0
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

604.0

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 604.0
FF:10024-101D6 15,40,85 years, mixed 604.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.