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PCOLCE2

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:81.4TPM
GTEx:35.1RPKM
FANTOM5:75.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA013203

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  
    
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 

Antibody staining

Antibody HPA013203

  

Adipocytes

 Not detected  

Fibroblasts

 Not detected  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

81.4
N/A Female, age 80
Sample 1
TPM: 67.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 101.6
N/A Female, age 57
Sample 3
TPM: 96.7
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 50.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 90.8
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

35.1

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 37.6
Samples: 350

Max RPKM: 130.2
Min RPKM: 2.7
Std RPKM: 21.9
Median RPKM: 34.1
GTEX-14BMV-0226-SM-5S2N2 130.2
GTEX-12126-0426-SM-5Q5AP 127.5
GTEX-ZDTS-0226-SM-5HL7Q 118.7
GTEX-12ZZY-0326-SM-5LZVQ 99.2
GTEX-131YS-0226-SM-5IJEH 95.6
GTEX-YFCO-2026-SM-4W21Q 93.8
GTEX-XQ3S-1626-SM-4WAYN 92.2
GTEX-Y5V5-2426-SM-5IFJA 89.9
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 31.2
Samples: 227

Max RPKM: 100.3
Min RPKM: 2.2
Std RPKM: 16.6
Median RPKM: 29.1
GTEX-146FH-2026-SM-5SI9I 100.3
GTEX-12WSL-1126-SM-5CVNK 76.3
GTEX-ZF2S-1526-SM-5S2OO 75.3
GTEX-131XG-0126-SM-5K7UJ 74.9
GTEX-YEC3-0926-SM-5Q5AC 72.9
GTEX-XAJ8-0226-SM-4GIB2 71.7
GTEX-U8XE-1926-SM-3DB98 70.3
GTEX-ZT9W-1026-SM-57WG5 68.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

75.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 75.8
FF:10010-101C1 65,65,76 years, mixed 75.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.