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TISSUE ATLAS PRIMARY DATA ESOPHAGUS

GENE/PROTEIN

Antibody validation


Dictionary

Esophagus

Tissue proteome

Esophagus

ESOPHAGUS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:162.5TPM
GTEx:135.1RPKM
FANTOM5:89.0Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:High
 

Antibody staining

Antibody HPA057236

 

Antibody CAB022549

 

Squamous epithelial cells

Medium   High  
   
   

ESOPHAGUS - HPA RNA-seq

Average TPM

162.5

overview Female, age 70
Sample 1
TPM: 163.6
Cell types%
Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45
overview Male, age 38
Sample 2
TPM: 169.4
Cell types%
Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20
overview Male, age 76
Sample 3
TPM: 154.5
Cell types%
Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM

135.1

GTEx sample id

RPKM

 

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 135.1
Samples: 286

Max RPKM: 398.6
Min RPKM: 30.6
Std RPKM: 58.1
Median RPKM: 120
GTEX-133LE-0626-SM-5IFFJ 398.6
GTEX-TMMY-1126-SM-4DXSX 368.9
GTEX-RUSQ-0826-SM-47JWW 368.3
GTEX-ZTX8-0226-SM-5E44D 346.8
GTEX-RU72-0726-SM-46MUW 338.1
GTEX-144GO-2726-SM-5O9A2 319.3
GTEX-XMK1-1326-SM-4B65Q 308.1
GTEX-XGQ4-1526-SM-4AT6H 293.6
GTEX-146FQ-1026-SM-5LU8I 285.0
GTEX-12WSL-1526-SM-5GCP8 281.1
GTEX-13X6H-1326-SM-5LU42 274.7
GTEX-Y111-1626-SM-57WCY 263.2
GTEX-11DXX-1126-SM-5GZZK 259.8
GTEX-13CF3-1626-SM-5IFG9 258.8
GTEX-111YS-0926-SM-5EGGI 249.7
GTEX-TSE9-1226-SM-4DXTM 245.3
GTEX-11TT1-0526-SM-5P9JO 233.1
GTEX-146FH-1726-SM-5QGQ2 231.4
GTEX-144FL-2726-SM-5O98Z 230.3
GTEX-T5JW-1326-SM-4DM5G 218.8
GTEX-11EM3-0826-SM-5N9CC 214.2
GTEX-ZYT6-1126-SM-5GZYR 213.4
GTEX-11DZ1-2026-SM-5A5KG 212.8
GTEX-131XF-0826-SM-5GICG 211.0
GTEX-YFC4-1226-SM-5LU9R 210.9
GTEX-RU1J-0326-SM-46MUM 210.3
GTEX-1497J-2726-SM-5SI9W 208.7
GTEX-QEG5-1426-SM-447AS 206.9
GTEX-Y8E4-1726-SM-5LU9G 206.9
GTEX-11EMC-2226-SM-5A5JW 205.9
GTEX-11LCK-1726-SM-5S2OQ 203.9
GTEX-WK11-1026-SM-4OOS8 198.0
GTEX-13PVQ-1726-SM-5IFF3 196.5
GTEX-1399U-1026-SM-5J1OC 195.5
GTEX-14E6E-0726-SM-5S2R3 195.1
GTEX-Y3I4-1226-SM-4TT8N 194.9
GTEX-139UW-1126-SM-5IJEJ 193.6
GTEX-13O1R-1326-SM-5IJF5 193.5
GTEX-ZYY3-1526-SM-5SIA9 193.5
GTEX-13X6K-2126-SM-5O9D4 186.0
GTEX-Y5V6-1026-SM-4VBS2 185.8
GTEX-R55D-1126-SM-48FEB 185.0
GTEX-ZT9X-0526-SM-5GCOP 184.2
GTEX-X4LF-0626-SM-4QASB 184.1
GTEX-WFJO-0826-SM-4LVM5 183.1
GTEX-12ZZW-1726-SM-5DUVD 180.2
GTEX-RM2N-0726-SM-48FD5 179.7
GTEX-XLM4-2326-SM-4TT2D 179.7
GTEX-132QS-1426-SM-5P9GE 178.8
GTEX-ZYWO-1026-SM-5E45U 177.8
GTEX-X4EO-1226-SM-4QARR 177.4
GTEX-139T6-0626-SM-5IFF9 175.6
GTEX-V955-1126-SM-4JBH3 173.4
GTEX-WFG8-1226-SM-4V6EI 172.9
GTEX-R45C-1226-SM-48FEE 171.5
GTEX-S32W-0926-SM-4AD5X 171.1
GTEX-11DYG-1326-SM-5N9DO 170.9
GTEX-P4QS-0626-SM-3NMD1 170.9
GTEX-PSDG-1326-SM-48TD2 170.4
GTEX-11I78-1526-SM-5A5K7 170.1
GTEX-13X6I-1026-SM-5LU4C 170.0
GTEX-QLQ7-0926-SM-447BC 168.9
GTEX-145MO-1426-SM-5Q5BS 168.2
GTEX-ZZ64-0226-SM-5E44X 168.1
GTEX-1212Z-2126-SM-5FQTM 167.4
GTEX-ZDYS-0826-SM-4WWCR 166.9
GTEX-13FH7-0526-SM-5IJF8 166.4
GTEX-NPJ8-1926-SM-3MJGB 163.8
GTEX-13OVJ-1226-SM-5L3HA 163.2
GTEX-R55E-1326-SM-48FCR 162.8
GTEX-144GN-0626-SM-5O9B2 162.0
GTEX-WQUQ-1626-SM-4OOSH 160.6
GTEX-1211K-0926-SM-5FQTL 159.6
GTEX-PVOW-1626-SM-48TC9 157.7
GTEX-Y5LM-1026-SM-4VDSQ 157.6
GTEX-14BMU-0926-SM-5S2QB 156.8
GTEX-S3XE-0926-SM-4AD4S 156.8
GTEX-11TUW-1326-SM-5EQKV 155.8
GTEX-ZYW4-1326-SM-5E45N 155.3
GTEX-QEG4-0726-SM-4R1JL 153.1
GTEX-111CU-0726-SM-5GZYD 152.4
GTEX-ZVE2-1326-SM-5NQ94 152.0
GTEX-R3RS-1326-SM-48FE7 150.9
GTEX-13O21-0626-SM-5IJDI 150.0
GTEX-XYKS-1526-SM-4BRUP 149.4
GTEX-T2IS-0826-SM-4DM6L 149.3
GTEX-13O3Q-0826-SM-5IFGF 149.0
GTEX-145MF-1426-SM-5O9B6 148.9
GTEX-P78B-1026-SM-3NMC4 148.9
GTEX-S7SF-0926-SM-4AD4M 148.1
GTEX-Y8LW-0726-SM-5IFI1 148.0
GTEX-ZXES-1126-SM-5GZXN 147.4
GTEX-11GSP-1826-SM-5N9DQ 146.9
GTEX-WFG7-1126-SM-4LMK3 146.3
GTEX-ZGAY-1126-SM-4WWBS 145.7
GTEX-ZUA1-1226-SM-5NQ6O 145.0
GTEX-Q2AI-0626-SM-48TZU 144.9
GTEX-S4P3-0426-SM-4AD56 144.4
GTEX-X15G-0826-SM-4PQZD 143.9
GTEX-TKQ1-0326-SM-4DXSM 143.7
GTEX-12WSA-1426-SM-5EGJU 141.7
GTEX-13111-0826-SM-5LZV3 141.0
GTEX-13FTW-1626-SM-5KM4N 140.7
GTEX-13W3W-1626-SM-5LU35 140.7
GTEX-WOFM-0626-SM-4OOS3 140.6
GTEX-SNMC-0526-SM-4DM69 138.5
GTEX-ZPU1-1426-SM-4WWFU 138.5
GTEX-UPK5-1226-SM-4IHL8 137.4
GTEX-ZTPG-1626-SM-5DUX2 136.7
GTEX-14C38-2126-SM-5RQJO 136.3
GTEX-Q2AH-0826-SM-48TZN 136.3
GTEX-ZAB5-0926-SM-5CVMV 136.1
GTEX-13OVG-0626-SM-5IFEP 135.5
GTEX-XXEK-0326-SM-4BRVV 135.3
GTEX-U3ZM-0526-SM-4DXTB 135.1
GTEX-S341-0526-SM-4AD5U 134.8
GTEX-T6MO-0526-SM-4DM6R 134.6
GTEX-OOBK-0625-SM-3LK5P 134.1
GTEX-T5JC-1726-SM-4DM6U 133.6
GTEX-QLQW-0526-SM-4R1KS 133.5
GTEX-RNOR-1226-SM-48FDQ 132.8
GTEX-132Q8-1826-SM-5EGIY 132.0
GTEX-SUCS-0726-SM-4DM7J 131.7
GTEX-YEC3-2526-SM-4YCDN 131.7
GTEX-QESD-0826-SM-47J4G 131.3
GTEX-11NSD-1126-SM-5N9BQ 130.8
GTEX-OXRL-0626-SM-3NM9C 130.8
GTEX-ZAB4-1126-SM-5HL86 128.1
GTEX-S95S-0426-SM-4B64I 126.8
GTEX-145ME-0526-SM-5QGQV 126.0
GTEX-Z9EW-0526-SM-5HL8S 125.4
GTEX-UPIC-1026-SM-4IHLT 125.2
GTEX-UJMC-0926-SM-4IHLK 124.9
GTEX-U3ZH-1026-SM-4DXUZ 124.2
GTEX-146FR-0426-SM-5SI97 124.1
GTEX-Y3IK-1126-SM-51MSV 124.1
GTEX-12696-1326-SM-5FQTJ 122.9
GTEX-PWN1-0626-SM-48TDT 122.4
GTEX-QVUS-0626-SM-447CC 121.0
GTEX-ZA64-0626-SM-5HL9O 120.9
GTEX-12ZZX-1326-SM-5DUWI 120.8
GTEX-ZY6K-0626-SM-59HJL 120.5
GTEX-W5WG-1626-SM-4LMKG 120.0
GTEX-11P81-0826-SM-5P9GR 119.9
GTEX-13S86-0826-SM-5SI6J 119.3
GTEX-11NUK-1326-SM-5P9GN 119.1
GTEX-ZG7Y-1126-SM-4WWEZ 118.7
GTEX-139TU-1226-SM-5J2NL 118.6
GTEX-13NZB-1226-SM-5J2MW 117.7
GTEX-QEL4-1426-SM-447AC 117.4
GTEX-P4PQ-0626-SM-3NMCU 117.1
GTEX-XQ3S-1126-SM-4BOPK 116.8
GTEX-Y114-0926-SM-4TT7J 116.5
GTEX-11XUK-0826-SM-5GU6P 116.3
GTEX-13D11-1926-SM-5IFGB 116.3
GTEX-11ZTS-2626-SM-5EGIC 116.1
GTEX-13FLV-1126-SM-5J2NO 115.5
GTEX-13PVR-1826-SM-5Q5CC 115.5
GTEX-X3Y1-1326-SM-4PQZB 115.3
GTEX-XUJ4-1026-SM-4BOPB 114.7
GTEX-145LT-1126-SM-5LUA1 114.3
GTEX-XV7Q-1126-SM-4BRVS 113.7
GTEX-U4B1-0826-SM-4DXTW 113.6
GTEX-SNOS-0626-SM-4DM5F 113.4
GTEX-14ICL-0526-SM-5RQJ6 113.3
GTEX-14BIN-2726-SM-5RQIE 113.2
GTEX-PLZ5-0926-SM-3TW8L 113.0
GTEX-13G51-0926-SM-5IFFU 112.9
GTEX-13FHO-1726-SM-5IFGM 112.1
GTEX-QV44-1126-SM-4R1KO 112.0
GTEX-Y5V5-1626-SM-4VDSG 112.0
GTEX-ZVP2-1326-SM-57WCE 111.9
GTEX-11ONC-1526-SM-5GU6S 111.7
GTEX-QDVN-1026-SM-48TZA 111.6
GTEX-13U4I-1126-SM-5LU3S 110.7
GTEX-XOTO-2126-SM-4B64U 110.6
GTEX-YF7O-0926-SM-5IFIF 110.6
GTEX-1399S-1326-SM-5P9GH 110.4
GTEX-WH7G-0926-SM-4LVMJ 109.5
GTEX-ZT9W-1326-SM-51MTB 109.3
GTEX-ZF29-1326-SM-4WWB6 109.2
GTEX-14E1K-1226-SM-5S2PD 109.1
GTEX-S33H-0826-SM-4AD5Y 108.6
GTEX-ZYFG-1126-SM-5GICY 108.6
GTEX-NFK9-1126-SM-3LK78 108.5
GTEX-11VI4-0526-SM-5EQ48 108.3
GTEX-12WSD-1826-SM-5GCOA 108.1
GTEX-131XG-1026-SM-5GCMX 108.1
GTEX-VJYA-0726-SM-4KL1T 108.1
GTEX-12C56-1226-SM-5FQSU 108.0
GTEX-ZZPT-1426-SM-5N9C5 107.3
GTEX-131YS-1426-SM-5IJF7 107.0
GTEX-145LS-1826-SM-5LUAZ 106.9
GTEX-UJHI-0826-SM-4IHLM 106.8
GTEX-R55G-1026-SM-48FDI 106.1
GTEX-XMD2-1326-SM-4YCET 105.6
GTEX-ZYVF-2226-SM-5GIDD 105.6
GTEX-11EQ9-0726-SM-5A5K2 105.3
GTEX-144GM-1426-SM-5LU31 104.6
GTEX-13FTX-0526-SM-5IFGS 103.8
GTEX-XUZC-0426-SM-4BOPE 103.6
GTEX-OXRP-0926-SM-48TC1 103.2
GTEX-VUSG-1226-SM-4KKZF 103.1
GTEX-ZF3C-1626-SM-4WWB4 102.7
GTEX-U8XE-1726-SM-4E3IF 102.6
GTEX-WRHK-0526-SM-4MVOF 101.2
GTEX-11ZU8-1526-SM-5EGHX 100.9
GTEX-147F3-0826-SM-5NQA7 100.4
GTEX-139YR-1726-SM-5IFFK 100.0
GTEX-ZE9C-1126-SM-4WWBD 99.8
GTEX-13OW8-2326-SM-5L3I9 98.8
GTEX-ZQUD-0426-SM-57WFR 98.8
GTEX-WVLH-1426-SM-4MVNX 98.4
GTEX-XBED-1026-SM-48TCB 97.4
GTEX-QDVJ-0726-SM-48U1W 96.7
GTEX-WFON-0826-SM-4LVMI 96.2
GTEX-OIZH-0626-SM-3NB1L 95.6
GTEX-13RTK-0526-SM-5S2QF 95.5
GTEX-R55C-0826-SM-48FCL 94.3
GTEX-V1D1-1026-SM-4JBHE 93.9
GTEX-XK95-1026-SM-4GIDV 93.8
GTEX-12KS4-0926-SM-5BC5S 93.0
GTEX-QCQG-0626-SM-48U21 92.9
GTEX-RTLS-1126-SM-46MUQ 92.9
GTEX-11P82-0526-SM-5986P 92.8
GTEX-T8EM-0526-SM-4DM64 92.5
GTEX-ZVT2-1326-SM-5E45H 92.2
GTEX-OIZI-1426-SM-3NB1T 92.1
GTEX-RWS6-0826-SM-47JXF 91.3
GTEX-11DXY-1426-SM-5N9CN 90.9
GTEX-REY6-1326-SM-48FDO 90.1
GTEX-N7MT-0326-SM-48TDP 89.9
GTEX-WEY5-0926-SM-4LMI4 89.7
GTEX-1399Q-1126-SM-5P9JA 88.4
GTEX-148VJ-1026-SM-5LU98 88.4
GTEX-1122O-1726-SM-5GICM 88.2
GTEX-YECK-1626-SM-5IFHQ 88.2
GTEX-145MN-1026-SM-5NQ9G 88.1
GTEX-PWCY-0726-SM-48TCS 87.3
GTEX-12WSK-1126-SM-5LZV8 87.1
GTEX-YB5E-0926-SM-4WWDQ 86.9
GTEX-Y9LG-0626-SM-4WWDH 85.9
GTEX-12ZZY-1426-SM-5N9EI 85.5
GTEX-U3ZN-1726-SM-4DXUQ 85.5
GTEX-13W46-1926-SM-5J2MF 83.8
GTEX-14DAQ-1426-SM-5RQJD 83.5
GTEX-P4QT-0626-SM-3NMCP 82.6
GTEX-14AS3-0626-SM-5QGQD 81.9
GTEX-131XE-1426-SM-5HL7V 81.5
GTEX-YJ89-1526-SM-5P9IR 78.7
GTEX-13OVI-2626-SM-5KM4T 78.3
GTEX-ZPCL-1426-SM-57WEC 78.1
GTEX-13QBU-1026-SM-5LU3R 77.9
GTEX-RN64-1026-SM-48FDX 77.2
GTEX-XBEW-1326-SM-4AT63 77.2
GTEX-R53T-1126-SM-48FD4 76.8
GTEX-117YX-1626-SM-5GZZG 76.7
GTEX-X585-1226-SM-46MW7 76.6
GTEX-145LV-1326-SM-5S2QI 76.4
GTEX-O5YV-1026-SM-3LK72 76.4
GTEX-1399R-0826-SM-5IJEL 75.5
GTEX-RVPV-0526-SM-47JYL 74.6
GTEX-11DXZ-1226-SM-5H11L 73.7
GTEX-ZF2S-1226-SM-4WWAX 73.7
GTEX-OIZG-1026-SM-3LK5X 73.4
GTEX-OXRN-1726-SM-3NM9B 71.6
GTEX-SE5C-1226-SM-4BRWV 71.5
GTEX-ZC5H-1326-SM-5HL7E 71.4
GTEX-PLZ6-0526-SM-3P61C 70.7
GTEX-XQ8I-1526-SM-4BOOH 68.6
GTEX-12BJ1-1626-SM-5HL8Y 68.4
GTEX-P4PP-0626-SM-3NM9X 68.3
GTEX-14H4A-1626-SM-5SI69 68.2
GTEX-OXRK-1326-SM-3NB1A 67.5
GTEX-PLZ4-1626-SM-3P618 67.4
GTEX-13QJ3-1726-SM-5RQK9 63.6
GTEX-117YW-1926-SM-5H121 60.1
GTEX-X4XY-1726-SM-46MVO 59.5
GTEX-132AR-2226-SM-5J2NT 57.6
GTEX-ZTSS-0626-SM-59867 56.5
GTEX-S4Q7-0626-SM-4AD5M 54.7
GTEX-11P7K-1326-SM-5BC5G 54.6
GTEX-TML8-1526-SM-4DXUX 53.3
GTEX-X62O-2226-SM-46MW3 49.9
GTEX-ZLV1-0526-SM-4WWD4 49.3
GTEX-14A6H-1326-SM-5NQBC 30.6
Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million

89.0

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 89.0
FF:10015-101C6 68,74,75 years, mixed 89.0

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