We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
H2AFZ
  • premium

    TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:153.0TPM
GTEx:106.8RPKM
FANTOM5:89.1Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA057236

 

Antibody CAB022549

 

Glandular cells

Medium   High  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

153.0

overview Male, age 65
Sample 1
TPM: 127.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 142.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 178.7
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 163.3

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

106.8

GTEx sample id

RPKM

 

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 106.8
Samples: 88

Max RPKM: 261.4
Min RPKM: 46.7
Std RPKM: 36
Median RPKM: 100.3
GTEX-Y5LM-1626-SM-4VDTB 261.4
GTEX-WFG8-1626-SM-4LVMB 229.9
GTEX-133LE-1426-SM-5IFH1 229.3
GTEX-XGQ4-1326-SM-4GIDU 195.0
GTEX-VUSG-1726-SM-4KKZL 165.8
GTEX-UPK5-2026-SM-4JBIM 161.6
GTEX-Z9EW-0926-SM-5CVMM 150.4
GTEX-ZP4G-1626-SM-57WGD 147.9
GTEX-131XG-1726-SM-5LZUR 142.2
GTEX-11P82-0826-SM-5P9GU 135.4
GTEX-XAJ8-0526-SM-47JYK 134.8
GTEX-139YR-2226-SM-5IFFW 131.7
GTEX-13RTK-0826-SM-5Q5C6 131.4
GTEX-13FTW-2026-SM-5IJE2 128.8
GTEX-145LT-1026-SM-5LU9O 128.7
GTEX-11NSD-1726-SM-5N9C3 126.9
GTEX-ZZ64-0526-SM-5GZXM 126.7
GTEX-1192X-2526-SM-59868 125.9
GTEX-WRHK-1026-SM-4MVOD 124.7
GTEX-ZYWO-1526-SM-5SIAL 123.1
GTEX-ZVP2-1726-SM-5GU5P 123.0
GTEX-X15G-1426-SM-4PQZK 120.4
GTEX-ZEX8-1826-SM-57WBH 120.3
GTEX-ZVT2-2126-SM-5NQ93 120.0
GTEX-ZYFG-2026-SM-5E43Y 118.7
GTEX-ZQUD-0926-SM-57WE3 117.8
GTEX-Y3IK-1726-SM-4YCCR 116.0
GTEX-117YX-0326-SM-5GICL 114.4
GTEX-13O61-1326-SM-5KM31 113.5
GTEX-ZLFU-1526-SM-4WWBT 113.0
GTEX-1399U-2126-SM-5IFEZ 112.4
GTEX-WFJO-0926-SM-4LVM2 111.8
GTEX-13QBU-1926-SM-5IJEW 111.7
GTEX-VJYA-0926-SM-4KL1N 111.3
GTEX-ZTPG-2626-SM-57WFX 111.2
GTEX-148VJ-2226-SM-5NQ9M 110.7
GTEX-1399R-2026-SM-5K7WN 108.8
GTEX-XUZC-1426-SM-4BRV3 105.6
GTEX-ZQG8-2526-SM-57WEQ 104.4
GTEX-WH7G-1626-SM-4LVMY 103.6
GTEX-X5EB-1626-SM-4E3IV 102.9
GTEX-ZA64-1226-SM-5HL7B 102.4
GTEX-111CU-1326-SM-5NQ8L 102.2
GTEX-14E6E-1626-SM-5RQI7 100.6
GTEX-11DXX-1626-SM-5H11H 100.0
GTEX-11VI4-1626-SM-5EQKO 98.8
GTEX-12WSK-1526-SM-5CVNO 98.6
GTEX-11XUK-1426-SM-5EQMG 97.0
GTEX-131XF-1326-SM-5GCMQ 96.9
GTEX-YB5E-1526-SM-5IFIE 96.1
GTEX-145ME-0926-SM-5O9AR 95.9
GTEX-WFG7-1726-SM-4LVME 95.2
GTEX-1399S-2026-SM-5KM4B 93.4
GTEX-13FH7-1226-SM-5IJFK 92.7
GTEX-WEY5-1526-SM-4LMJF 92.6
GTEX-12BJ1-1926-SM-5HL9Z 92.2
GTEX-ZC5H-2326-SM-4WAYT 92.1
GTEX-14DAR-1426-SM-5RQIR 90.5
GTEX-ZXES-1526-SM-5NQ95 90.5
GTEX-13111-1426-SM-5DUW3 90.4
GTEX-11EQ9-1326-SM-5985X 89.5
GTEX-11P7K-1626-SM-5GU63 88.7
GTEX-ZTX8-0526-SM-59HLD 86.9
GTEX-13CF3-1226-SM-5LZXN 86.9
GTEX-ZPIC-2326-SM-57WDW 86.3
GTEX-XXEK-1026-SM-4BRUW 85.4
GTEX-11I78-1126-SM-5A5K5 85.2
GTEX-ZLV1-1126-SM-4WWBW 83.6
GTEX-13O21-1026-SM-5IJDU 83.2
GTEX-WQUQ-2426-SM-4MVNW 82.7
GTEX-13PL7-2626-SM-5IFH4 80.5
GTEX-11DXZ-1326-SM-5H11X 80.0
GTEX-13113-1226-SM-5EGHT 79.6
GTEX-13OVI-1926-SM-5IJCG 76.8
GTEX-XMK1-1826-SM-4B66F 75.6
GTEX-Y114-1426-SM-4TT6W 75.3
GTEX-ZF2S-1726-SM-57WFT 75.0
GTEX-139T6-1026-SM-5IJGC 72.1
GTEX-Y9LG-1626-SM-5IFHM 69.7
GTEX-1122O-1326-SM-5H11F 69.7
GTEX-13D11-0726-SM-5LZZB 69.5
GTEX-XBED-1426-SM-4AT4G 69.4
GTEX-YEC4-1726-SM-4W21E 67.1
GTEX-ZVZP-1826-SM-5GZXB 65.6
GTEX-ZPCL-1726-SM-57WEO 63.3
GTEX-ZTSS-0926-SM-59865 60.0
GTEX-YF7O-1826-SM-5IFIU 48.9
GTEX-111YS-1426-SM-5GID8 46.7
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

89.1

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 89.1
FF:10024-101D6 15,40,85 years, mixed 89.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.