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PI16

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:58.0TPM
GTEx:23.8RPKM
FANTOM5:26.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA043763

  

Adipocytes

 Not detected  

Chondrocytes

 Medium  

Fibroblasts

 Low  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Medium
 
 

Antibody staining

Antibody HPA043763

  

Adipocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

58.0
N/A Female, age 80
Sample 1
TPM: 14.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 52.1
N/A Female, age 57
Sample 3
TPM: 44.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 74.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 104.2
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

23.8

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 27.0
Samples: 350

Max RPKM: 510.4
Min RPKM: 0.3
Std RPKM: 40.7
Median RPKM: 14.8
GTEX-145MI-0426-SM-5O99V 510.4
GTEX-SSA3-0226-SM-32QPN 225.0
GTEX-Q734-1826-SM-2I3EL 221.5
GTEX-X4EO-0426-SM-4QASA 219.0
GTEX-144GL-0226-SM-5QGOX 148.7
GTEX-1313W-0226-SM-5LZV7 129.3
GTEX-131YS-0226-SM-5IJEH 127.3
GTEX-YFCO-2026-SM-4W21Q 127.3
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 19.0
Samples: 227

Max RPKM: 196.9
Min RPKM: 0.1
Std RPKM: 28.7
Median RPKM: 8.2
GTEX-WL46-2026-SM-3LK7U 196.9
GTEX-YECK-1426-SM-5IFHE 166.3
GTEX-12WSI-1526-SM-5GCNM 154.6
GTEX-WK11-2426-SM-3NMAA 151.7
GTEX-ZDXO-2326-SM-5LU9W 118.6
GTEX-145MF-1026-SM-5Q5EQ 104.2
GTEX-13OW7-1126-SM-5K7V6 91.2
GTEX-13OW8-0326-SM-5L3FB 85.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

26.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 26.0
FF:10010-101C1 65,65,76 years, mixed 26.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.