Tissue expression of HDX - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	1.3	TPM
GTEx:	0.2	RPKM
FANTOM5:	5.9	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA047189
Squamous epithelial cells	High

ESOPHAGUS - HPA RNA-seq

Average TPM	1.3

Female, age 70

Sample 1
TPM: 0.8

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 1.1

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 2.1

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	0.2

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 0.2

Samples: 286

Max RPKM: 0.7
Min RPKM: 0
Std RPKM: 0.1
Median RPKM: 0.1

GTEX-ZZPT-1426-SM-5N9C5

0.7

GTEX-11DZ1-2026-SM-5A5KG

0.6

GTEX-13X6I-1026-SM-5LU4C

0.6

GTEX-R45C-1226-SM-48FEE

0.6

GTEX-11DYG-1326-SM-5N9DO

0.5

GTEX-144GO-2726-SM-5O9A2

0.5

GTEX-14BMU-0926-SM-5S2QB

0.5

GTEX-XV7Q-1126-SM-4BRVS

0.5

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	5.9

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 5.9

FF:10015-101C6

68,74,75 years, mixed

5.9