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HPRT1
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:23.0RPKM
FANTOM5:108.6Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:High
Neuronal cells:High
 

Antibody staining

Antibody HPA006360

 

Antibody CAB012200

 

Glial cells

High   High  

Neuronal cells

High   High  
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

23.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 23.0
Samples: 117

Max RPKM: 80
Min RPKM: 2.6
Std RPKM: 13
Median RPKM: 21.5
GTEX-T2IS-0011-R5A-SM-32QP4 80.0
GTEX-139TT-0011-R5b-SM-5K7W8 58.4
GTEX-1399T-0011-R5b-SM-5IJDK 48.4
GTEX-P44H-0011-R5A-SM-2XCEX 46.0
GTEX-X585-0011-R5A-SM-46MVI 44.5
GTEX-T6MN-0011-R5A-SM-32QPD 43.2
GTEX-12WSC-0011-R5b-SM-5CVNS 42.8
GTEX-PVOW-0011-R5A-SM-32PL7 41.8
GTEX-12WSF-0011-R5a-SM-5HL8K 39.4
GTEX-UTHO-0011-R5A-SM-3GIJD 39.0
GTEX-S7SE-0011-R5A-SM-2XCDA 38.6
GTEX-131YS-0011-R5b-SM-5K7YB 38.1
GTEX-QVJO-0011-R5A-SM-2S1QM 38.1
GTEX-ZUA1-0011-R5b-SM-51MTG 38.0
GTEX-13G51-0011-R5a-SM-5L3EB 37.7
GTEX-11OF3-0011-R5a-SM-57WB4 37.1
GTEX-1313W-0011-R5b-SM-5L3EP 37.1
GTEX-14ABY-0011-R5b-SM-5SI7B 36.8
GTEX-WWYW-0011-R5A-SM-3NB3E 35.8
GTEX-13X6K-0011-R5b-SM-5PNUE 34.9
GTEX-145MH-0011-R5a-SM-5P9JT 34.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 34.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 34.0
GTEX-13X6J-0011-R5b-SM-5PNWT 33.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 33.4
GTEX-N7MS-0011-R5a-SM-2HMK8 32.7
GTEX-Z93S-0011-R5b-SM-4RGNI 32.4
GTEX-WVLH-0011-R5A-SM-3MJFW 32.3
GTEX-WZTO-0011-R5B-SM-3NMC5 32.2
GTEX-WL46-0011-R5A-SM-3LK6V 31.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 31.5
GTEX-T5JC-0011-R5A-SM-32PLK 31.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 31.1
GTEX-13FLW-0011-R5a-SM-5LZX6 30.7
GTEX-13VXU-0011-R5a-SM-5O9D7 30.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 30.3
GTEX-N7MT-0011-R5a-SM-2I3G6 30.3
GTEX-13O3O-0011-R5b-SM-5KM44 30.1
GTEX-14BIM-0011-R5b-SM-5S2RM 30.1
GTEX-11NV4-0011-R5a-SM-5NQ88 29.5
GTEX-11H98-0011-R5b-SM-57WCF 29.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 28.7
GTEX-145LS-0011-R5a-SM-5SI65 28.6
GTEX-TSE9-0011-R5A-SM-3DB7J 28.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 27.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 26.9
GTEX-13FXS-0011-R5b-SM-5LZYE 26.2
GTEX-132Q8-0011-R5a-SM-5IJDM 26.0
GTEX-13SLX-0011-R5a-SM-5O9BV 25.6
GTEX-R55E-0011-R5A-SM-2TC5N 25.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 24.7
GTEX-11GSP-0011-R5a-SM-57WBE 23.7
GTEX-13OVL-0011-R5b-SM-5L3FU 23.4
GTEX-13X6I-0011-R5a-SM-5PNWW 23.3
GTEX-RVPU-0011-R5A-SM-2XCAD 23.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 22.8
GTEX-13CZV-0011-R5a-SM-5K7XA 22.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 21.6
GTEX-13OW6-0011-R5a-SM-5O9BK 21.5
GTEX-12WSD-0011-R5b-SM-5CVNG 21.3
GTEX-13S7M-0011-R5b-SM-5P9HS 21.2
GTEX-QMR6-0011-R5A-SM-32PKT 21.1
GTEX-RU72-0011-R5A-SM-2TF6U 21.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 20.4
GTEX-13JUV-0011-R5a-SM-5LZY5 20.2
GTEX-12WSB-0011-R5b-SM-5GU67 19.6
GTEX-OHPN-0011-R5A-SM-2I5FF 19.6
GTEX-13OW7-0011-R5b-SM-5O9DM 19.5
GTEX-13NYB-0011-R5a-SM-5MR45 19.1
GTEX-13FLV-0011-R5a-SM-5LZWT 19.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 18.5
GTEX-ZE7O-0011-R5a-SM-57WBO 17.1
GTEX-RVPV-0011-R5A-SM-2TF69 16.9
GTEX-NL4W-0011-R5a-SM-2I3GD 16.6
GTEX-12ZZX-0011-R5a-SM-5HL89 16.5
GTEX-YFC4-0011-R5a-SM-4RGLR 16.2
GTEX-13OVH-0011-R5b-SM-5KM4L 15.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 15.8
GTEX-13NYS-0011-R5a-SM-5MR4D 15.5
GTEX-XOTO-0011-R5A-SM-4B657 15.2
GTEX-XMD1-0011-R5A-SM-4AT47 14.8
GTEX-14BIN-0011-R5b-SM-5SI78 14.6
GTEX-NL3H-0011-R5a-SM-2I3GB 14.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 14.3
GTEX-12WSA-0011-R5b-SM-5GU5I 14.1
GTEX-13OW5-0011-R5b-SM-5L3FR 14.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 14.0
GTEX-ZXG5-0011-R5b-SM-57WBN 13.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 12.5
GTEX-OXRN-0011-R5A-SM-2I5EF 11.7
GTEX-12WSH-0011-R5b-SM-5P9F3 11.6
GTEX-YJ89-0011-R5a-SM-4V6GM 10.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 10.7
GTEX-144GO-0011-R5a-SM-5PNUR 10.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 10.4
GTEX-13CIG-0011-R5b-SM-5L3F2 9.8
GTEX-NPJ7-0011-R5a-SM-33HBK 9.5
GTEX-11WQC-0011-R5a-SM-5BC74 9.4
GTEX-13JVG-0011-R5a-SM-5MR4O 9.4
GTEX-X4XX-0011-R5A-SM-46MWN 9.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.7
GTEX-139T8-0011-R5b-SM-5J1MO 8.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 8.1
GTEX-X261-0011-R5A-SM-3NMB4 7.9
GTEX-ZVT3-0011-R5a-SM-51MSI 7.8
GTEX-139TS-0011-R5b-SM-5J2MZ 6.7
GTEX-ZV68-0011-R5a-SM-4YCDW 6.7
GTEX-13112-0011-R5b-SM-5DUV8 6.4
GTEX-144GL-0011-R5b-SM-5PNUJ 5.6
GTEX-1445S-0011-R5a-SM-5PNUS 4.9
GTEX-13FHP-0011-R5b-SM-5LZY2 4.5
GTEX-1477Z-0011-R5b-SM-5PNUO 4.3
GTEX-11UD1-0011-R5b-SM-5P9FP 4.0
GTEX-13CF2-0011-R5a-SM-5LZWS 3.9
GTEX-S7PM-0011-R5A-SM-3NM8G 3.9
GTEX-13NZA-0011-R5b-SM-5KM4K 3.0
GTEX-145MG-0011-R5b-SM-5S2VU 2.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

108.6

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 108.6
FF:10379-105H1 89 years, female 159.7
FF:10164-103B2 76 years, female 57.5

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