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API5

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:45.8TPM
GTEx:18.6RPKM
FANTOM5:93.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Low
 
 

Antibody staining

Antibody HPA026598

  

Fibroblasts

 Low  
    
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Not detected
 

Antibody staining

Antibody HPA026598

  

Adipocytes

 Medium  

Fibroblasts

 Not detected  
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

45.8
N/A Female, age 80
Sample 1
TPM: 42.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 42.9
N/A Female, age 57
Sample 3
TPM: 34.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 61.5
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 47.9
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

18.6

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.4
Samples: 350

Max RPKM: 29.6
Min RPKM: 11.9
Std RPKM: 2.8
Median RPKM: 19.2
GTEX-OIZI-0226-SM-2XCEE 29.6
GTEX-REY6-0326-SM-2TF5A 29.4
GTEX-TSE9-0226-SM-3DB84 28.9
GTEX-POYW-0726-SM-2XCEO 27.8
GTEX-SNMC-1326-SM-2XCFK 27.0
GTEX-Y3IK-2526-SM-4WWDM 26.7
GTEX-SIU8-0226-SM-2XCDS 26.4
GTEX-P44H-0326-SM-2XCES 26.1
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 17.4
Samples: 227

Max RPKM: 24.4
Min RPKM: 11.3
Std RPKM: 2.7
Median RPKM: 17.5
GTEX-11NV4-1426-SM-5BC4W 24.4
GTEX-13JUV-0626-SM-5J1MQ 24.0
GTEX-12WSG-0426-SM-5FQSE 23.8
GTEX-13IVO-2426-SM-5K7V9 23.7
GTEX-1128S-0926-SM-5GZZU 23.2
GTEX-11P7K-0826-SM-5BC5F 22.6
GTEX-11WQK-1526-SM-5EGKN 22.5
GTEX-117YX-0726-SM-5GIET 22.4
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

93.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 93.0
FF:10010-101C1 65,65,76 years, mixed 93.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.