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Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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C2
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    TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

C2

Gene description

Complement component 2

Protein class

Disease related genes
Enzymes
Plasma proteins
Potential drug targets
Predicted intracellular proteins
Predicted secreted proteins

Predicted localization

Intracellular,Secreted

Number of transcripts

11
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Tissue enhanced (liver, lung)
GTEx:Tissue enhanced (liver)
FANTOM5:Tissue enriched (liver)

Protein evidence

Evidence at protein level

Protein expression

Positivity in plasma.

DATA RELIABILITY

Data reliability
description

Secreted protein, tissue location of RNA and protein might differ and correlation is complex.

Reliability score

Supported based on 1 antibody.
CAB016775
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (liver, lung)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enhanced (liver)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (liver)

GENE INFORMATION

Gene name

C2

Synonyms

Description

Complement component 2 (HGNC Symbol)

Entrez gene summary

Component C2 is a serum glycoprotein that functions as part of the classical pathway of the complement system. Activated C1 cleaves C2 into C2a and C2b. The serine proteinase C2a then combines with complement factor 4b to create the C3 or C5 convertase. Deficiency of C2 has been reported to associated with certain autoimmune diseases and SNPs in this gene have been associated with altered susceptibility to age-related macular degeneration. This gene localizes within the class III region of the MHC on the short arm of chromosome 6. Alternative splicing results in multiple transcript variants encoding distinct isoforms. Additional transcript variants have been described in publications but their full-length sequence has not been determined.[provided by RefSeq, Mar 2009]

Chromosome

6

Cytoband

p21.33

Chromosome location (bp)

31897785 - 31945672

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000166278 (version 83.38)

Entrez gene

717

UniProt

P06681 (UniProt - Evidence at protein level)

neXtProt

NX_P06681

Antibodypedia

C2 antibodies

PROTEIN BROWSER

«
C2-001
C2-002
C2-003
C2-004
C2-007
C2-009
C2-010
C2-011
C2-014
C2-015
C2-017
»

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

C2-001
ENSP00000299367
ENST00000299367
P06681 [Direct mapping]
Complement C2 Complement C2b fragment Complement C2a fragment
Q5JP69 [Target identity:100%; Query identity:100%]
Complement component 2, isoform CRA_b; cDNA, FLJ92956, Homo sapiens complement component 2 (C2), mRNA
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Serine-type peptidases
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006508 [proteolysis]
GO:0006956 [complement activation]
GO:0006958 [complement activation, classical pathway]
GO:0007584 [response to nutrient]
GO:0030449 [regulation of complement activation]
GO:0045087 [innate immune response]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
GO:2000427 [positive regulation of apoptotic cell clearance]
Show all
752 aa
83.3 kDa
Yes 0
C2-002
ENSP00000406190
ENST00000418949
Q8N6L6 [Direct mapping]
C2 protein; Complement C2
Show all
   MEMSAT3 predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
328 aa
35.5 kDa
Yes 0
C2-003
ENSP00000372664
ENST00000383177
H0Y3H6 [Direct mapping]
Complement C2
Show all
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0006508 [proteolysis]
Show all
526 aa
58.8 kDa
Yes 0
C2-004
ENSP00000417482
ENST00000497706
E9PDZ0 [Direct mapping]
Complement C2
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0006508 [proteolysis]
Show all
463 aa
51.4 kDa
No 0
C2-007
ENSP00000403325
ENST00000413154
Q5ST52 [Direct mapping]
Complement C2
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
139 aa
14.8 kDa
Yes 0
C2-009
ENSP00000391354
ENST00000447952
F2Z3N2 [Direct mapping]
Complement C2
Show all
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Protein evidence (Ezkurdia et al 2014)
Show all
203 aa
21.7 kDa
Yes 0
C2-010
ENSP00000395683
ENST00000442278
P06681 [Direct mapping]
Complement C2 Complement C2b fragment Complement C2a fragment
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Serine-type peptidases
   SPOCTOPUS predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
Plasma proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006508 [proteolysis]
GO:0006956 [complement activation]
GO:0006958 [complement activation, classical pathway]
GO:0030449 [regulation of complement activation]
GO:0045087 [innate immune response]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
GO:2000427 [positive regulation of apoptotic cell clearance]
Show all
620 aa
69.4 kDa
Yes 0
C2-011
ENSP00000419048
ENST00000494905
C9JYQ5 [Direct mapping]
Complement C2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
136 aa
14.9 kDa
No 0
C2-014
ENSP00000392322
ENST00000452323
P06681 [Direct mapping]
Complement C2 Complement C2b fragment Complement C2a fragment
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Serine-type peptidases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Disease related genes
Potential drug targets
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0006508 [proteolysis]
GO:0006956 [complement activation]
GO:0006958 [complement activation, classical pathway]
GO:0030449 [regulation of complement activation]
GO:0045087 [innate immune response]
GO:0046872 [metal ion binding]
GO:0070062 [extracellular exosome]
GO:2000427 [positive regulation of apoptotic cell clearance]
Show all
538 aa
60.3 kDa
No 0
C2-015
ENSP00000406121
ENST00000452202
A2ABG0 [Direct mapping]
Complement C2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
158 aa
17.5 kDa
No 0
C2-017
ENSP00000418923
ENST00000469372
B4DQI1 [Direct mapping]
Complement C2; cDNA FLJ54376, highly similar to Complement C2 (EC 3.4.21.43)
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0006508 [proteolysis]
Show all
506 aa
56.5 kDa
No 0

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The Human Protein Atlas project is funded
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