Tissue expression of ACSM1 - Summary - The Human Protein Atlas

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ACSM1

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	ACSM1
Gene description	Acyl-CoA synthetase medium-chain family member 1
Protein class	Enzymes Predicted intracellular proteins Predicted membrane proteins
Predicted localization	Intracellular,Membrane
Number of transcripts	4
	SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Tissue enriched (breast)
GTEx:	Mixed

Protein evidence

Evidence at protein level

Protein expression

Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY
Data reliability description	RNA-based expert annotation gave inconclusive results. Pending external verification.
Reliability score	Uncertain based on 1 antibody. HPA046291
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

N/A

Cerebral cortex

N/A

Hippocampus

N/A

N/A

Caudate

N/A

N/A

Cerebellum

N/A

N/A

Endocrine tissues

N/A

Thyroid gland

N/A

Parathyroid gland

N/A

Adrenal gland

N/A

Bone marrow & immune system

N/A

Appendix

N/A

Bone marrow

N/A

Lymph node

N/A

Tonsil

N/A

Spleen

N/A

Muscle tissues

N/A

Heart muscle

N/A

Skeletal muscle

N/A

Smooth muscle

N/A

Lung

N/A

Nasopharynx

N/A

N/A

Bronchus

N/A

N/A

Lung

N/A

Liver & gallbladder

N/A

Liver

N/A

Gallbladder

N/A

Pancreas

N/A

Pancreas

N/A

Gastrointestinal tract

N/A

Oral mucosa

N/A

N/A

Salivary gland

N/A

Esophagus

N/A

Stomach

N/A

Duodenum

N/A

Small intestine

N/A

Colon

N/A

Rectum

N/A

Kidney & urinary bladder

N/A

Kidney

N/A

Urinary bladder

N/A

Male tissues

N/A

Testis

N/A

Epididymis

N/A

Prostate

N/A

Seminal vesicle

N/A

Female tissues

N/A

Breast

N/A

Vagina

N/A

N/A

Cervix, uterine

N/A

Endometrium

N/A

Fallopian tube

N/A

Ovary

N/A

Placenta

N/A

Adipose & soft tissue

N/A

Adipose tissue

N/A

Soft tissue

N/A

N/A

Skin

N/A

Skin

N/A

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Tissue enriched (breast)
GTEx dataset Organ Expression Alphabetical RNA tissue category: Mixed

GENE INFORMATION
Gene name	ACSM1 (HGNC Symbol)
Synonyms	BUCS1, MACS1
Description	Acyl-CoA synthetase medium-chain family member 1 (HGNC Symbol)
Entrez gene summary
Chromosome	16
Cytoband	p12.3
Chromosome location (bp)	20623237 - 20698890
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000166743 (version 83.38)
Entrez gene	116285
UniProt	Q08AH1 (UniProt - Evidence at protein level)
neXtProt	NX_Q08AH1
Antibodypedia	ACSM1 antibodies

PROTEIN BROWSER

ACSM1-001	ACSM1-002	ACSM1-003	ACSM1-006

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
ACSM1-001 ENSP00000301956 ENST00000307493	Q08AH1 [Direct mapping] Acyl-coenzyme A synthetase ACSM1, mitochondrial Show all	Enzymes ENZYME proteins Ligase Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Show all	GO:0003824 [catalytic activity] GO:0003996 [acyl-CoA ligase activity] GO:0005524 [ATP binding] GO:0005525 [GTP binding] GO:0005739 [mitochondrion] GO:0005759 [mitochondrial matrix] GO:0006633 [fatty acid biosynthetic process] GO:0006805 [xenobiotic metabolic process] GO:0008152 [metabolic process] GO:0015645 [fatty acid ligase activity] GO:0015980 [energy derivation by oxidation of organic compounds] GO:0018874 [benzoate metabolic process] GO:0019395 [fatty acid oxidation] GO:0019605 [butyrate metabolic process] GO:0042632 [cholesterol homeostasis] GO:0044281 [small molecule metabolic process] GO:0046872 [metal ion binding] GO:0047760 [butyrate-CoA ligase activity] GO:0070062 [extracellular exosome] GO:0072562 [blood microparticle] Show all	577 aa 65.3 kDa	No	2
ACSM1-002 ENSP00000428047 ENST00000520010	Q08AH1 [Direct mapping] Acyl-coenzyme A synthetase ACSM1, mitochondrial Show all	Enzymes ENZYME proteins Ligase Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins # TM segments-based 2TM proteins predicted by MDM Show all	GO:0003824 [catalytic activity] GO:0003996 [acyl-CoA ligase activity] GO:0005524 [ATP binding] GO:0005525 [GTP binding] GO:0005759 [mitochondrial matrix] GO:0006805 [xenobiotic metabolic process] GO:0008152 [metabolic process] GO:0015980 [energy derivation by oxidation of organic compounds] GO:0018874 [benzoate metabolic process] GO:0019395 [fatty acid oxidation] GO:0019605 [butyrate metabolic process] GO:0042632 [cholesterol homeostasis] GO:0044281 [small molecule metabolic process] GO:0046872 [metal ion binding] GO:0047760 [butyrate-CoA ligase activity] GO:0070062 [extracellular exosome] GO:0072562 [blood microparticle] Show all	577 aa 65.3 kDa	No	2
ACSM1-003 ENSP00000428830 ENST00000523065	E5RFK0 [Direct mapping] Acyl-coenzyme A synthetase ACSM1, mitochondrial Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0003824 [catalytic activity] GO:0008152 [metabolic process] GO:0016021 [integral component of membrane] Show all	154 aa 18.1 kDa	No	1
ACSM1-006 ENSP00000428098 ENST00000524149	H0YAU5 [Direct mapping] Acyl-coenzyme A synthetase ACSM1, mitochondrial Show all	Predicted intracellular proteins Show all	GO:0003824 [catalytic activity] GO:0008152 [metabolic process] Show all	249 aa 28.1 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.