We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PATL1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:16.7TPM
GTEx:15.3RPKM
FANTOM5:23.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:High
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA039030

 

Adipocytes

Not detected  

Glandular cells

High  

Myoepithelial cells

Low  
 
 

BREAST - HPA RNA-seq

Average TPM

16.7

overview Female, age 52
Sample 1
TPM: 16.0
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 13.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 17.0
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 19.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

15.3

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 15.3
Samples: 214

Max RPKM: 31.3
Min RPKM: 7
Std RPKM: 3.5
Median RPKM: 15.1
GTEX-13W46-0826-SM-5LU3H 31.3
GTEX-R3RS-0626-SM-48FE1 24.9
GTEX-X4EP-2926-SM-3P5YQ 24.9
GTEX-W5X1-2326-SM-3GIL6 24.7
GTEX-T2IS-1526-SM-32QPR 24.1
GTEX-WI4N-1426-SM-3LK7H 23.8
GTEX-VJWN-0726-SM-3GIJ8 23.5
GTEX-T2YK-2226-SM-32QPT 22.1
GTEX-11WQK-2426-SM-5GU5C 22.0
GTEX-ZVE2-1226-SM-5NQ8R 21.9
GTEX-XMD2-0926-SM-4WWEF 21.7
GTEX-QDT8-0626-SM-48TYW 21.6
GTEX-13FTY-2226-SM-5J1ND 21.5
GTEX-ZAJG-0626-SM-5HL8X 21.4
GTEX-TMMY-0726-SM-33HBE 20.9
GTEX-X261-0626-SM-3NMD9 20.7
GTEX-YFC4-1426-SM-5IFJG 20.7
GTEX-11TUW-1826-SM-5BC5D 20.2
GTEX-R55F-1726-SM-2TF4R 20.0
GTEX-147F4-2826-SM-5NQBN 19.9
GTEX-RU72-0626-SM-46MUI 19.8
GTEX-T5JC-2126-SM-32PMO 19.8
GTEX-U3ZH-1426-SM-4DXSR 19.7
GTEX-UTHO-1026-SM-3GAF7 19.6
GTEX-13O3P-0826-SM-5L3DH 19.5
GTEX-TKQ2-1826-SM-33HB2 19.4
GTEX-S7SE-0826-SM-4AT4D 19.1
GTEX-13NZ8-0126-SM-5IJCT 19.0
GTEX-1117F-2826-SM-5GZXL 18.9
GTEX-WYVS-1726-SM-3NMAY 18.9
GTEX-12ZZX-1126-SM-5EGKB 18.8
GTEX-13NZ9-1026-SM-5MR5K 18.8
GTEX-13PL6-2926-SM-5L3I2 18.8
GTEX-QEG5-0726-SM-4R1JQ 18.8
GTEX-U3ZN-1926-SM-4DXSG 18.8
GTEX-12WSK-2226-SM-5GCO5 18.7
GTEX-ZVT4-1026-SM-57WC4 18.6
GTEX-144GM-0926-SM-5O994 18.5
GTEX-ZC5H-2626-SM-5J2MG 18.5
GTEX-1314G-1226-SM-5BC6D 18.4
GTEX-13PVQ-1026-SM-5KM3M 18.2
GTEX-UJHI-1426-SM-3DB9C 18.1
GTEX-Y5LM-1726-SM-4VDSX 18.1
GTEX-1192X-2326-SM-5987X 18.0
GTEX-139T8-0826-SM-5L3DE 18.0
GTEX-SIU7-1626-SM-4BRUK 17.8
GTEX-XOT4-0726-SM-4GIAW 17.8
GTEX-Q2AG-0326-SM-48U1O 17.7
GTEX-117XS-1926-SM-5GICO 17.6
GTEX-UPK5-2326-SM-3P5Z8 17.6
GTEX-ZAB4-2526-SM-5HL8M 17.6
GTEX-ZF2S-2026-SM-5E461 17.6
GTEX-1211K-1926-SM-5EQLB 17.4
GTEX-131XW-0726-SM-5EGK3 17.4
GTEX-VUSG-2226-SM-4KKZO 17.3
GTEX-ZY6K-1626-SM-5GZWV 17.3
GTEX-11EMC-2026-SM-5A5JV 17.2
GTEX-132Q8-1426-SM-5EGK7 17.2
GTEX-13O3Q-2226-SM-5KM4O 17.2
GTEX-XMD1-0826-SM-4AT52 17.2
GTEX-WYBS-0926-SM-3NM94 17.0
GTEX-ZF3C-2326-SM-5S2MZ 16.9
GTEX-12WSB-0626-SM-59HJO 16.8
GTEX-146FH-0826-SM-5SI8T 16.8
GTEX-131YS-0626-SM-5EGKL 16.7
GTEX-13O3O-0826-SM-5K7WE 16.7
GTEX-X4XY-0926-SM-4E3JD 16.7
GTEX-ZZPU-0626-SM-5E43T 16.6
GTEX-13CF2-2026-SM-5K7VI 16.5
GTEX-REY6-2426-SM-48FF5 16.5
GTEX-ZF29-1926-SM-5S2P1 16.5
GTEX-ZU9S-1926-SM-5NQBP 16.5
GTEX-11ONC-2126-SM-5HL6E 16.3
GTEX-QEL4-2126-SM-447AE 16.3
GTEX-11DZ1-0326-SM-5N9BN 16.2
GTEX-11EM3-1326-SM-5N9C6 16.1
GTEX-13QIC-2326-SM-5LU5N 16.1
GTEX-11GSO-1926-SM-5A5K3 16.0
GTEX-1313W-0826-SM-5EQ4T 16.0
GTEX-ZEX8-2226-SM-57WC6 16.0
GTEX-11DXY-2326-SM-5GICW 15.9
GTEX-1269C-2426-SM-5FQSN 15.9
GTEX-11EI6-0626-SM-5985T 15.8
GTEX-TKQ1-0226-SM-33HB5 15.8
GTEX-Y5V5-2126-SM-4WWFO 15.8
GTEX-ZV6S-1826-SM-5NQ8D 15.8
GTEX-ZVZQ-0826-SM-51MRF 15.8
GTEX-ZWKS-2826-SM-5NQ74 15.8
GTEX-13NZB-2126-SM-5MR4Y 15.7
GTEX-S341-1526-SM-4AD6K 15.7
GTEX-WOFL-0826-SM-3MJG1 15.6
GTEX-Y8LW-1626-SM-5IFHX 15.6
GTEX-S4P3-1326-SM-4AD6V 15.5
GTEX-11WQC-1726-SM-5GU4W 15.4
GTEX-13113-1726-SM-5GCOO 15.4
GTEX-13FHO-0826-SM-5L3E8 15.4
GTEX-13OW5-2226-SM-5L3HC 15.4
GTEX-R53T-1526-SM-48FEK 15.4
GTEX-11P81-1926-SM-5BC53 15.3
GTEX-13N1W-0626-SM-5MR4U 15.3
GTEX-ZYWO-2326-SM-5GZY4 15.3
GTEX-13CF3-2126-SM-5IFJP 15.2
GTEX-144GL-2026-SM-5LU3O 15.2
GTEX-14753-2426-SM-5LU8U 15.2
GTEX-RWS6-1926-SM-47JXY 15.2
GTEX-TML8-1226-SM-32QON 15.2
GTEX-ZYW4-0826-SM-5GIDG 15.2
GTEX-T6MO-0326-SM-32QOK 15.1
GTEX-XUW1-2326-SM-4BOO5 15.0
GTEX-11NV4-2026-SM-5N9DG 14.9
GTEX-QVJO-1826-SM-447C9 14.9
GTEX-ZYFC-0826-SM-5E44K 14.9
GTEX-111YS-1926-SM-5GICC 14.8
GTEX-U412-1826-SM-4DXTJ 14.8
GTEX-Y114-2026-SM-4TT7L 14.8
GTEX-11DXW-0626-SM-5N9ER 14.7
GTEX-133LE-1726-SM-5K7VQ 14.7
GTEX-ZXES-0826-SM-5E43C 14.7
GTEX-11GS4-2126-SM-5A5KR 14.4
GTEX-XV7Q-2326-SM-4BRVZ 14.4
GTEX-WXYG-2226-SM-4E3IM 14.3
GTEX-Y3IK-2326-SM-4WWDT 14.3
GTEX-1122O-1226-SM-5H113 14.2
GTEX-XQ3S-1326-SM-4BOPQ 14.2
GTEX-11DXZ-1926-SM-5GZZL 14.1
GTEX-11I78-2226-SM-5PNYA 14.1
GTEX-XBED-1626-SM-47JYN 14.1
GTEX-ZLFU-2126-SM-4WWEV 14.1
GTEX-13OW8-0226-SM-5K7UP 14.0
GTEX-QMRM-1626-SM-4R1KV 14.0
GTEX-WYJK-1326-SM-3NB2T 14.0
GTEX-ZVTK-0326-SM-51MRR 14.0
GTEX-13D11-1026-SM-5IJFB 13.9
GTEX-U8XE-0826-SM-4E3J1 13.9
GTEX-11OF3-1926-SM-59889 13.8
GTEX-12BJ1-1826-SM-5HL9N 13.7
GTEX-T6MN-0726-SM-32PML 13.6
GTEX-XUZC-1626-SM-4BRVP 13.6
GTEX-12WSM-1726-SM-5BC6J 13.5
GTEX-1399U-1826-SM-5PNZ1 13.5
GTEX-145ME-1526-SM-5Q5F2 13.5
GTEX-S32W-2026-SM-4AD6E 13.5
GTEX-XYKS-1326-SM-4BRUN 13.5
GTEX-13N11-1726-SM-5J1OJ 13.4
GTEX-RUSQ-2026-SM-4GIAK 13.4
GTEX-ZDXO-0126-SM-5S2ND 13.4
GTEX-ZYT6-0126-SM-5E45J 13.4
GTEX-S33H-0326-SM-4AD6N 13.3
GTEX-WFON-1826-SM-3GILG 13.3
GTEX-WRHU-0326-SM-3MJFY 13.3
GTEX-ZV7C-1826-SM-5NQ83 13.3
GTEX-11P7K-0726-SM-5EGKX 13.1
GTEX-XGQ4-0926-SM-4AT4U 13.1
GTEX-ZA64-1526-SM-5CVMD 13.0
GTEX-11PRG-0826-SM-5EQ6A 12.9
GTEX-11ZUS-0826-SM-5FQUY 12.9
GTEX-T5JW-2026-SM-4DM63 12.9
GTEX-Y9LG-1426-SM-5IFJZ 12.9
GTEX-ZUA1-1526-SM-59HLS 12.9
GTEX-132AR-0826-SM-5EGK6 12.8
GTEX-12KS4-0126-SM-5Q5A5 12.7
GTEX-YFCO-1826-SM-4W1YH 12.7
GTEX-S4UY-0726-SM-4AD6X 12.6
GTEX-X15G-1626-SM-3NMB3 12.6
GTEX-Y111-2026-SM-4SOJA 12.6
GTEX-ZPIC-1126-SM-5BC7F 12.6
GTEX-PSDG-1626-SM-48TCQ 12.5
GTEX-XUJ4-1926-SM-4BOOV 12.5
GTEX-YB5K-1626-SM-5IFIN 12.5
GTEX-ZDYS-1126-SM-5K7UB 12.5
GTEX-ZTX8-1226-SM-4YCE9 12.5
GTEX-11EQ9-1826-SM-5Q5AJ 12.4
GTEX-132NY-0826-SM-5K7Y7 12.4
GTEX-13W3W-1226-SM-5LU4H 12.4
GTEX-Y3I4-1526-SM-4TT7K 12.4
GTEX-ZT9W-2026-SM-51MRA 12.3
GTEX-13O61-1826-SM-5KM4I 12.2
GTEX-117YX-1426-SM-5H12H 12.1
GTEX-11LCK-2426-SM-5HL5F 12.1
GTEX-12WSN-1326-SM-5GCNT 12.0
GTEX-YJ8O-2226-SM-5IFHW 11.9
GTEX-ZTTD-1026-SM-51MRD 11.9
GTEX-11O72-2126-SM-5N9FO 11.7
GTEX-S4Q7-1126-SM-4AD6R 11.7
GTEX-ZDTT-2126-SM-5S2OJ 11.7
GTEX-ZZ64-1226-SM-5E43R 11.7
GTEX-13FTX-1126-SM-5N9EN 11.6
GTEX-ZVT2-1826-SM-5NQ8W 11.6
GTEX-ZLV1-1426-SM-4WWES 11.5
GTEX-11NSD-0926-SM-5N9DR 11.4
GTEX-139T6-1626-SM-5PNYZ 11.4
GTEX-145MO-0826-SM-5NQBL 11.4
GTEX-14AS3-1626-SM-5S2OY 11.2
GTEX-YEC3-1026-SM-5IFI5 11.1
GTEX-XQ8I-2426-SM-4WAXY 10.9
GTEX-145LT-0726-SM-5S2VM 10.7
GTEX-13S86-1226-SM-5S2OA 10.6
GTEX-11ZTT-2326-SM-5EQLG 10.5
GTEX-145MN-1926-SM-5SIAI 10.5
GTEX-SE5C-2126-SM-4BRUJ 10.5
GTEX-14E6E-1326-SM-5S2NR 10.4
GTEX-Y8E4-1626-SM-5S2MW 10.4
GTEX-11P82-1326-SM-5HL62 10.1
GTEX-Y5V6-2126-SM-4WWFX 10.1
GTEX-R55D-0826-SM-48FEA 10.0
GTEX-YB5E-1726-SM-5IFJ3 10.0
GTEX-ZQUD-1926-SM-51MSA 10.0
GTEX-11TT1-2126-SM-5GU5Y 9.7
GTEX-ZQG8-0726-SM-5P9H9 9.6
GTEX-13FTW-1426-SM-5LZWZ 9.5
GTEX-WY7C-2726-SM-3NB3P 9.1
GTEX-139TU-0626-SM-5KM3X 8.5
GTEX-XMK1-1126-SM-4IHJ8 8.4
GTEX-14ABY-2126-SM-5QGQZ 7.0
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

23.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 23.9
FF:10080-102A8 77 years, female 23.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.