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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:20.7TPM
GTEx:90.6RPKM
FANTOM5:369.9Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Medium
Myoepithelial cells:Medium
 

Antibody staining

Antibody HPA002645

 

Antibody HPA003230

 

Antibody CAB011199

 

Antibody CAB015181

 

Adipocytes

Not detected   Low   Not detected   Not detected  

Glandular cells

Medium   Medium   Medium   Low  

Myoepithelial cells

Medium   Medium   Medium   Low  
       
       

BREAST - HPA RNA-seq

Average TPM

20.7

overview Female, age 52
Sample 1
TPM: 15.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 20.9
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 23.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 23.0
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

90.6

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 90.6
Samples: 214

Max RPKM: 210.7
Min RPKM: 40.6
Std RPKM: 24
Median RPKM: 88.5
GTEX-132AR-0826-SM-5EGK6 210.7
GTEX-X4XY-0926-SM-4E3JD 163.9
GTEX-13O3Q-2226-SM-5KM4O 160.4
GTEX-X261-0626-SM-3NMD9 154.1
GTEX-VJWN-0726-SM-3GIJ8 151.2
GTEX-13O3O-0826-SM-5K7WE 151.1
GTEX-13S86-1226-SM-5S2OA 149.2
GTEX-ZY6K-1626-SM-5GZWV 147.7
GTEX-146FH-0826-SM-5SI8T 147.5
GTEX-14ABY-2126-SM-5QGQZ 141.8
GTEX-11TT1-2126-SM-5GU5Y 141.6
GTEX-13NZ8-0126-SM-5IJCT 132.9
GTEX-R3RS-0626-SM-48FE1 132.7
GTEX-145LT-0726-SM-5S2VM 131.7
GTEX-XYKS-1326-SM-4BRUN 128.3
GTEX-QEG5-0726-SM-4R1JQ 128.0
GTEX-XBED-1626-SM-47JYN 125.4
GTEX-ZTTD-1026-SM-51MRD 123.4
GTEX-WI4N-1426-SM-3LK7H 123.2
GTEX-13NZ9-1026-SM-5MR5K 122.7
GTEX-147F4-2826-SM-5NQBN 122.7
GTEX-VUSG-2226-SM-4KKZO 121.9
GTEX-1211K-1926-SM-5EQLB 120.7
GTEX-ZTX8-1226-SM-4YCE9 120.0
GTEX-REY6-2426-SM-48FF5 119.0
GTEX-13113-1726-SM-5GCOO 116.4
GTEX-ZVT2-1826-SM-5NQ8W 115.5
GTEX-T5JW-2026-SM-4DM63 114.4
GTEX-11O72-2126-SM-5N9FO 114.3
GTEX-13FHO-0826-SM-5L3E8 113.7
GTEX-13QIC-2326-SM-5LU5N 113.4
GTEX-T6MN-0726-SM-32PML 113.4
GTEX-1313W-0826-SM-5EQ4T 113.3
GTEX-WOFL-0826-SM-3MJG1 113.3
GTEX-ZU9S-1926-SM-5NQBP 112.2
GTEX-1122O-1226-SM-5H113 110.6
GTEX-11P7K-0726-SM-5EGKX 110.1
GTEX-Y5LM-1726-SM-4VDSX 109.1
GTEX-ZVT4-1026-SM-57WC4 107.8
GTEX-RUSQ-2026-SM-4GIAK 107.2
GTEX-ZF3C-2326-SM-5S2MZ 107.0
GTEX-ZZPU-0626-SM-5E43T 105.1
GTEX-ZAJG-0626-SM-5HL8X 104.8
GTEX-ZC5H-2626-SM-5J2MG 104.8
GTEX-13OW5-2226-SM-5L3HC 104.6
GTEX-S33H-0326-SM-4AD6N 103.1
GTEX-ZF29-1926-SM-5S2P1 103.0
GTEX-14E6E-1326-SM-5S2NR 102.6
GTEX-Y114-2026-SM-4TT7L 102.6
GTEX-11GS4-2126-SM-5A5KR 102.3
GTEX-13O3P-0826-SM-5L3DH 102.3
GTEX-13W3W-1226-SM-5LU4H 102.2
GTEX-YJ8O-2226-SM-5IFHW 101.9
GTEX-ZVZQ-0826-SM-51MRF 101.6
GTEX-SE5C-2126-SM-4BRUJ 101.4
GTEX-131XW-0726-SM-5EGK3 101.3
GTEX-S32W-2026-SM-4AD6E 100.0
GTEX-T2IS-1526-SM-32QPR 98.8
GTEX-ZV7C-1826-SM-5NQ83 97.8
GTEX-WYBS-0926-SM-3NM94 97.3
GTEX-11DZ1-0326-SM-5N9BN 96.5
GTEX-XUZC-1626-SM-4BRVP 96.4
GTEX-11TUW-1826-SM-5BC5D 96.2
GTEX-SIU7-1626-SM-4BRUK 95.7
GTEX-ZYW4-0826-SM-5GIDG 95.4
GTEX-132NY-0826-SM-5K7Y7 95.3
GTEX-S4P3-1326-SM-4AD6V 95.3
GTEX-XUJ4-1926-SM-4BOOV 95.3
GTEX-QDT8-0626-SM-48TYW 95.1
GTEX-Y5V6-2126-SM-4WWFX 95.1
GTEX-13N11-1726-SM-5J1OJ 94.2
GTEX-TKQ1-0226-SM-33HB5 94.2
GTEX-S341-1526-SM-4AD6K 94.0
GTEX-XOT4-0726-SM-4GIAW 93.7
GTEX-XMD2-0926-SM-4WWEF 93.6
GTEX-11OF3-1926-SM-59889 93.5
GTEX-14AS3-1626-SM-5S2OY 93.4
GTEX-131YS-0626-SM-5EGKL 93.1
GTEX-TKQ2-1826-SM-33HB2 92.7
GTEX-ZLV1-1426-SM-4WWES 92.6
GTEX-R55F-1726-SM-2TF4R 92.5
GTEX-11DXW-0626-SM-5N9ER 92.4
GTEX-133LE-1726-SM-5K7VQ 92.4
GTEX-13PVQ-1026-SM-5KM3M 92.3
GTEX-11EM3-1326-SM-5N9C6 92.2
GTEX-12ZZX-1126-SM-5EGKB 92.1
GTEX-WXYG-2226-SM-4E3IM 92.1
GTEX-Y3IK-2326-SM-4WWDT 92.0
GTEX-11DXY-2326-SM-5GICW 91.9
GTEX-W5X1-2326-SM-3GIL6 91.8
GTEX-11WQC-1726-SM-5GU4W 91.5
GTEX-111YS-1926-SM-5GICC 91.4
GTEX-1314G-1226-SM-5BC6D 91.4
GTEX-13FTY-2226-SM-5J1ND 90.9
GTEX-13W46-0826-SM-5LU3H 90.6
GTEX-13O61-1826-SM-5KM4I 90.5
GTEX-QEL4-2126-SM-447AE 90.4
GTEX-U3ZH-1426-SM-4DXSR 90.4
GTEX-139TU-0626-SM-5KM3X 90.3
GTEX-145MO-0826-SM-5NQBL 90.1
GTEX-ZF2S-2026-SM-5E461 90.0
GTEX-13NZB-2126-SM-5MR4Y 89.9
GTEX-WRHU-0326-SM-3MJFY 89.5
GTEX-ZLFU-2126-SM-4WWEV 89.5
GTEX-T5JC-2126-SM-32PMO 89.2
GTEX-11WQK-2426-SM-5GU5C 88.9
GTEX-X4EP-2926-SM-3P5YQ 88.7
GTEX-U8XE-0826-SM-4E3J1 88.3
GTEX-ZDYS-1126-SM-5K7UB 88.3
GTEX-WFON-1826-SM-3GILG 87.8
GTEX-YEC3-1026-SM-5IFI5 87.7
GTEX-ZDXO-0126-SM-5S2ND 87.2
GTEX-11EMC-2026-SM-5A5JV 87.1
GTEX-13N1W-0626-SM-5MR4U 87.1
GTEX-U412-1826-SM-4DXTJ 87.0
GTEX-WYVS-1726-SM-3NMAY 86.9
GTEX-13PL6-2926-SM-5L3I2 86.8
GTEX-11P81-1926-SM-5BC53 86.7
GTEX-11PRG-0826-SM-5EQ6A 86.6
GTEX-S7SE-0826-SM-4AT4D 86.4
GTEX-1399U-1826-SM-5PNZ1 86.3
GTEX-ZVTK-0326-SM-51MRR 86.2
GTEX-13CF2-2026-SM-5K7VI 86.1
GTEX-XV7Q-2326-SM-4BRVZ 85.5
GTEX-S4Q7-1126-SM-4AD6R 85.4
GTEX-1117F-2826-SM-5GZXL 84.6
GTEX-12WSK-2226-SM-5GCO5 84.3
GTEX-ZYWO-2326-SM-5GZY4 84.3
GTEX-11ONC-2126-SM-5HL6E 84.2
GTEX-Q2AG-0326-SM-48U1O 84.1
GTEX-11NV4-2026-SM-5N9DG 84.0
GTEX-12BJ1-1826-SM-5HL9N 84.0
GTEX-TMMY-0726-SM-33HBE 83.5
GTEX-Y8LW-1626-SM-5IFHX 83.2
GTEX-TML8-1226-SM-32QON 82.3
GTEX-117YX-1426-SM-5H12H 82.2
GTEX-X15G-1626-SM-3NMB3 82.0
GTEX-11NSD-0926-SM-5N9DR 81.7
GTEX-WYJK-1326-SM-3NB2T 81.2
GTEX-ZXES-0826-SM-5E43C 80.6
GTEX-11EQ9-1826-SM-5Q5AJ 80.1
GTEX-144GM-0926-SM-5O994 80.1
GTEX-ZAB4-2526-SM-5HL8M 80.1
GTEX-WY7C-2726-SM-3NB3P 79.7
GTEX-S4UY-0726-SM-4AD6X 78.9
GTEX-RWS6-1926-SM-47JXY 78.7
GTEX-Y5V5-2126-SM-4WWFO 78.6
GTEX-YFC4-1426-SM-5IFJG 78.4
GTEX-ZA64-1526-SM-5CVMD 78.3
GTEX-ZDTT-2126-SM-5S2OJ 78.1
GTEX-12WSN-1326-SM-5GCNT 77.6
GTEX-Y3I4-1526-SM-4TT7K 77.4
GTEX-11EI6-0626-SM-5985T 76.4
GTEX-11P82-1326-SM-5HL62 76.3
GTEX-ZVE2-1226-SM-5NQ8R 76.2
GTEX-ZPIC-1126-SM-5BC7F 76.1
GTEX-T2YK-2226-SM-32QPT 75.2
GTEX-UPK5-2326-SM-3P5Z8 75.0
GTEX-UJHI-1426-SM-3DB9C 74.7
GTEX-1192X-2326-SM-5987X 74.3
GTEX-13D11-1026-SM-5IJFB 74.2
GTEX-RU72-0626-SM-46MUI 73.7
GTEX-139T6-1626-SM-5PNYZ 73.5
GTEX-144GL-2026-SM-5LU3O 73.4
GTEX-ZYFC-0826-SM-5E44K 73.4
GTEX-14753-2426-SM-5LU8U 73.0
GTEX-ZV6S-1826-SM-5NQ8D 73.0
GTEX-13CF3-2126-SM-5IFJP 72.8
GTEX-Y9LG-1426-SM-5IFJZ 72.7
GTEX-R53T-1526-SM-48FEK 72.5
GTEX-117XS-1926-SM-5GICO 72.4
GTEX-12WSB-0626-SM-59HJO 72.3
GTEX-11LCK-2426-SM-5HL5F 72.1
GTEX-13FTW-1426-SM-5LZWZ 71.7
GTEX-13OW8-0226-SM-5K7UP 71.6
GTEX-12WSM-1726-SM-5BC6J 70.5
GTEX-YB5K-1626-SM-5IFIN 70.4
GTEX-Y111-2026-SM-4SOJA 70.3
GTEX-145ME-1526-SM-5Q5F2 69.9
GTEX-T6MO-0326-SM-32QOK 69.3
GTEX-11ZTT-2326-SM-5EQLG 68.8
GTEX-Y8E4-1626-SM-5S2MW 68.7
GTEX-ZQG8-0726-SM-5P9H9 68.5
GTEX-ZT9W-2026-SM-51MRA 67.8
GTEX-XGQ4-0926-SM-4AT4U 67.7
GTEX-UTHO-1026-SM-3GAF7 67.0
GTEX-13FTX-1126-SM-5N9EN 66.7
GTEX-ZUA1-1526-SM-59HLS 66.7
GTEX-11ZUS-0826-SM-5FQUY 66.6
GTEX-1269C-2426-SM-5FQSN 66.6
GTEX-U3ZN-1926-SM-4DXSG 66.4
GTEX-XUW1-2326-SM-4BOO5 65.2
GTEX-ZWKS-2826-SM-5NQ74 63.9
GTEX-11GSO-1926-SM-5A5K3 63.2
GTEX-YFCO-1826-SM-4W1YH 62.8
GTEX-145MN-1926-SM-5SIAI 62.5
GTEX-ZYT6-0126-SM-5E45J 62.4
GTEX-R55D-0826-SM-48FEA 61.9
GTEX-12KS4-0126-SM-5Q5A5 61.8
GTEX-QVJO-1826-SM-447C9 61.1
GTEX-ZZ64-1226-SM-5E43R 60.9
GTEX-XQ3S-1326-SM-4BOPQ 58.0
GTEX-11DXZ-1926-SM-5GZZL 57.7
GTEX-ZEX8-2226-SM-57WC6 57.3
GTEX-XQ8I-2426-SM-4WAXY 55.0
GTEX-ZQUD-1926-SM-51MSA 55.0
GTEX-11I78-2226-SM-5PNYA 54.4
GTEX-139T8-0826-SM-5L3DE 54.0
GTEX-QMRM-1626-SM-4R1KV 53.3
GTEX-PSDG-1626-SM-48TCQ 52.9
GTEX-YB5E-1726-SM-5IFJ3 45.7
GTEX-XMD1-0826-SM-4AT52 45.3
GTEX-132Q8-1426-SM-5EGK7 44.6
GTEX-XMK1-1126-SM-4IHJ8 40.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

369.9

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 369.9
FF:10080-102A8 77 years, female 369.9

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