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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:12.3TPM
GTEx:27.0RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA002645

 

Antibody HPA003230

 

Antibody CAB011199

 

Antibody CAB015181

 

Endothelial cells

Low   Medium   Not detected   Medium  

Glial cells

Medium   High   Medium   Medium  

Neuronal cells

High   High   High   High  

Neuropil

Low   Not detected   Medium   Not detected  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

12.3

N/A Male, age 5
Sample 1
TPM: 15.9
overview Female, age 40
Sample 2
TPM: 7.9
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 13.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

27.0

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 22.4
Samples: 114

Max RPKM: 52.3
Min RPKM: 10.8
Std RPKM: 7.2
Median RPKM: 20.2
GTEX-X585-3026-SM-46MWF 52.3
GTEX-13OVJ-2826-SM-5L3GW 47.4
GTEX-WHSE-3026-SM-3P5ZH 43.3
GTEX-13NYC-2826-SM-5K7WR 43.2
GTEX-11OC5-0726-SM-5P9JK 41.1
GTEX-13JVG-3126-SM-5L3FH 40.0
GTEX-13NYS-3126-SM-5KLYV 35.4
GTEX-144FL-3026-SM-5O99C 34.9
GTEX-NPJ8-1526-SM-2D7VU 34.2
GTEX-WWYW-3126-SM-3NB39 33.5
GTEX-TSE9-3026-SM-3DB76 33.2
GTEX-11WQK-3026-SM-5EQL6 32.2
GTEX-13IVO-2926-SM-5L3CZ 30.5
GTEX-WZTO-2926-SM-3NM9I 29.0
GTEX-145LS-3126-SM-5Q5BY 28.4
GTEX-QMR6-1426-SM-32PLA 28.4
GTEX-13SLX-3126-SM-5S2Q5 27.9
GTEX-132Q8-3026-SM-5PNVG 27.8
GTEX-13X6K-2926-SM-5Q5D5 27.8
GTEX-13FHO-3026-SM-5J1O9 27.7
GTEX-11ONC-2926-SM-5P9JM 27.6
GTEX-11GSP-3226-SM-5986O 27.3
GTEX-PVOW-2526-SM-2XCF7 27.2
GTEX-XOTO-3026-SM-4B65M 27.1
GTEX-11DXY-3226-SM-5GIDE 26.7
GTEX-11NUK-2926-SM-5A5MD 26.2
GTEX-13PVQ-3026-SM-5SI93 25.8
GTEX-13OW8-2826-SM-5L3GC 25.3
GTEX-ZAK1-3026-SM-5S2MJ 25.0
GTEX-12ZZZ-3026-SM-5BC67 23.8
GTEX-ZE7O-3126-SM-5HL5X 23.5
GTEX-QDT8-2926-SM-32PKC 23.4
GTEX-12WSD-3126-SM-5HL7P 23.1
GTEX-131YS-3126-SM-5KLYT 23.1
GTEX-T5JC-2426-SM-3NMDB 22.9
GTEX-13FXS-3126-SM-5J2NN 22.8
GTEX-1192X-3126-SM-5N9BY 22.7
GTEX-RU72-3026-SM-5SI7Y 22.5
GTEX-ZYFD-3026-SM-5E44C 22.4
GTEX-139T8-1026-SM-5J2MC 22.1
GTEX-14A5I-2926-SM-5Q5CQ 21.9
GTEX-13FHP-3026-SM-5IJBS 21.7
GTEX-14ASI-3026-SM-5S2PN 21.7
GTEX-ZUA1-3026-SM-59HJC 21.7
GTEX-XLM4-3026-SM-4AT6L 21.6
GTEX-13G51-3026-SM-5IJB8 21.5
GTEX-117XS-3026-SM-5N9CA 21.4
GTEX-T2IS-3026-SM-32QPM 21.2
GTEX-12ZZX-2926-SM-5GCOQ 21.0
GTEX-ZZPT-3026-SM-5GZXH 20.9
GTEX-14BMV-3026-SM-5S2PQ 20.8
GTEX-QVUS-2826-SM-3GADB 20.7
GTEX-145MH-3026-SM-5Q5DZ 20.5
GTEX-Y8DK-0826-SM-4TT3T 20.4
GTEX-UTHO-3026-SM-3GAFB 20.3
GTEX-11PRG-2926-SM-5987A 20.2
GTEX-11TTK-2926-SM-5PNYP 20.2
GTEX-12ZZY-3026-SM-5GCOU 20.2
GTEX-13PL6-3126-SM-5LUAR 20.2
GTEX-11GSO-2926-SM-5HL73 20.1
GTEX-11EI6-3026-SM-5GZZO 20.0
GTEX-WL46-2926-SM-3LK82 20.0
GTEX-11O72-2926-SM-5BC4V 19.9
GTEX-NPJ7-2726-SM-2I3FT 19.8
GTEX-1399T-3026-SM-5KLZC 19.6
GTEX-144GL-3026-SM-5Q5CW 19.6
GTEX-12WSH-3026-SM-5CVNI 19.4
GTEX-13OVH-3026-SM-5MR4N 19.4
GTEX-12WSC-3026-SM-5GCNF 19.2
GTEX-11ZUS-2926-SM-5FQSL 19.1
GTEX-131XW-3126-SM-5LZUC 19.1
GTEX-13JUV-2926-SM-5LZX7 19.1
GTEX-RNOR-2326-SM-2TF4I 19.1
GTEX-111FC-3126-SM-5GZZ2 19.0
GTEX-1128S-2726-SM-5H12C 19.0
GTEX-OXRN-2426-SM-2I5EQ 19.0
GTEX-QVJO-1426-SM-2S1QY 19.0
GTEX-11EMC-3226-SM-5EGKW 18.8
GTEX-T6MN-2626-SM-32PMQ 18.8
GTEX-1313W-3126-SM-5LZUI 18.7
GTEX-145MG-3026-SM-5RQJA 18.7
GTEX-PWO3-0926-SM-2I5EY 18.7
GTEX-13OW6-3026-SM-5J2MI 18.6
GTEX-YFC4-3126-SM-5PNV6 18.5
GTEX-R55F-1326-SM-5S2V4 18.1
GTEX-12ZZW-2926-SM-5LZUP 18.0
GTEX-11DXW-1126-SM-5H12Q 17.9
GTEX-WVLH-3026-SM-3MJG9 17.9
GTEX-13QIC-2926-SM-5J2NF 17.8
GTEX-X4XX-3026-SM-3NMB2 17.8
GTEX-12126-1026-SM-5P9JJ 17.7
GTEX-13OW7-3026-SM-5L3GY 17.7
GTEX-13O3O-3126-SM-5KM3H 17.6
GTEX-11GS4-3126-SM-5A5LH 17.5
GTEX-13VXU-2926-SM-5LU5C 17.5
GTEX-13NYB-3026-SM-5IJD7 17.4
GTEX-12WSA-2926-SM-5EQ4D 17.3
GTEX-13FLW-1426-SM-5K7YE 17.3
GTEX-1445S-3026-SM-5O9BR 17.3
GTEX-13O3Q-2926-SM-5KM45 17.2
GTEX-13X6J-3026-SM-5Q5CU 17.2
GTEX-145MF-2726-SM-5O995 17.0
GTEX-Y111-2726-SM-4TT3N 16.7
GTEX-YJ89-3026-SM-5IFJI 16.7
GTEX-ZVT3-3026-SM-5E43N 16.5
GTEX-11OF3-2926-SM-5HL78 15.4
GTEX-ZAJG-3126-SM-5HL9J 15.1
GTEX-13S7M-3126-SM-5RQJQ 14.9
GTEX-Z93S-2926-SM-57WB9 14.1
GTEX-Q2AG-2926-SM-2HMJ3 13.9
GTEX-N7MT-1126-SM-5SI7V 12.9
GTEX-1117F-3226-SM-5N9CT 11.0
GTEX-11NV4-2126-SM-5N9DS 10.8
GTEX-147GR-3026-SM-5S2ML 10.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 31.9
Samples: 108

Max RPKM: 112.2
Min RPKM: 15
Std RPKM: 11.6
Median RPKM: 30.7
GTEX-13N2G-0011-R10a-SM-5MR34 112.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 58.2
GTEX-QVUS-0011-R10A-SM-3GIK3 57.6
GTEX-WWYW-0011-R10A-SM-3NB35 54.2
GTEX-X4EP-0011-R10B-SM-4QASJ 53.0
GTEX-XMD1-0011-R10A-SM-4AT4A 50.7
GTEX-X585-0011-R10A-SM-46MUY 49.5
GTEX-QDT8-0011-R10A-SM-32PKG 48.4
GTEX-13QJC-0011-R10a-SM-5SI63 47.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 47.2
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.6
GTEX-13X6K-0011-R10a-SM-5P9JR 41.7
GTEX-NL4W-0011-R10A-SM-2I3DY 41.0
GTEX-S7SE-0011-R10A-SM-2XCDF 40.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 40.5
GTEX-XLM4-0011-R10A-SM-4AT5P 39.2
GTEX-13NYS-0011-R10a-SM-5MR4S 39.1
GTEX-T5JC-0011-R10A-SM-32PM2 38.5
GTEX-11ZUS-0011-R10b-SM-5BC79 38.0
GTEX-YFC4-0011-R10a-SM-4SOK5 36.4
GTEX-X4XX-0011-R10B-SM-46MWO 36.2
GTEX-WVLH-0011-R10A-SM-3MJFM 35.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 35.6
GTEX-13RTJ-0011-R10b-SM-5O9CW 35.3
GTEX-147GR-0011-R10b-SM-5S2UM 35.2
GTEX-ZF28-0011-R10a-SM-4WWEH 34.8
GTEX-WL46-0011-R10A-SM-3MJFQ 34.7
GTEX-13FHO-0011-R10b-SM-5J2MM 34.4
GTEX-QMR6-0011-R10A-SM-32PKO 34.3
GTEX-QVJO-0011-R10A-SM-2S1QJ 34.2
GTEX-TSE9-0011-R10A-SM-3DB7O 34.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 34.1
GTEX-13O3Q-0011-R10b-SM-5KM39 33.7
GTEX-12WSC-0011-R10a-SM-5GU57 33.6
GTEX-T6MN-0011-R10A-SM-32QP7 33.6
GTEX-14BIL-0011-R10a-SM-5SI75 33.5
GTEX-NL3H-0011-R10A-SM-2I3E9 33.5
GTEX-131YS-0011-R10b-SM-5EQ5N 33.3
GTEX-11H98-0011-R10b-SM-5NQ98 32.9
GTEX-X261-0011-R10B-SM-4E3JT 32.8
GTEX-12WSF-0011-R10a-SM-5LZVH 32.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 32.7
GTEX-1313W-0011-R10b-SM-5DUXA 32.6
GTEX-145MG-0011-R10a-SM-5PNWG 32.5
GTEX-WZTO-0011-R10B-SM-4E3KB 32.3
GTEX-1445S-0011-R10a-SM-5PNWB 32.0
GTEX-11WQK-0011-R10a-SM-5BC6R 31.7
GTEX-145MH-0011-R10b-SM-5PNUK 31.6
GTEX-14BIN-0011-R10a-SM-5S2UA 31.5
GTEX-P44H-0011-R10A-SM-2XCEK 31.4
GTEX-12WSH-0011-R10a-SM-5LZUS 31.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 31.1
GTEX-13X6I-0011-R10a-SM-5PNWI 31.0
GTEX-13FLW-0011-R10b-SM-5LZZF 30.7
GTEX-ZAB4-0011-R10a-SM-4SOKH 30.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 30.2
GTEX-13OW8-0011-R10a-SM-5L3H6 29.9
GTEX-N7MS-0011-R10A-SM-2HMJK 29.9
GTEX-12WSM-0011-R10a-SM-5DUWV 29.6
GTEX-13JVG-0011-R10b-SM-5KM2P 29.4
GTEX-13QIC-0011-R10a-SM-5O9C7 29.3
GTEX-13OVL-0011-R10a-SM-5L3GS 29.2
GTEX-13SLW-0011-R10a-SM-5S2UI 29.0
GTEX-OXRO-0011-R10A-SM-2I5EH 28.9
GTEX-132Q8-0011-R10b-SM-5DUWZ 28.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 28.2
GTEX-13OW7-0011-R10a-SM-5L3H3 28.2
GTEX-13FXS-0011-R10a-SM-5J2MA 28.0
GTEX-N7MT-0011-R10A-SM-2I3E1 28.0
GTEX-12126-0011-R10b-SM-5BC6T 27.8
GTEX-13SLX-0011-R10a-SM-5P9HV 27.8
GTEX-13S7M-0011-R10b-SM-5PNZB 27.6
GTEX-131XH-0011-R10a-SM-5EGLJ 27.3
GTEX-ZUA1-0011-R10a-SM-51MT6 27.3
GTEX-ZDXO-0011-R10a-SM-4WWD8 27.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 27.0
GTEX-12WSE-0011-R10b-SM-5P9JV 27.0
GTEX-13N1W-0011-R10b-SM-5MR4H 26.9
GTEX-145LS-0011-R10a-SM-5PNUQ 26.6
GTEX-13CZV-0011-R10b-SM-5LZYD 26.5
GTEX-13JUV-0011-R10b-SM-5LZXR 26.2
GTEX-145LU-0011-R10a-SM-5PNWJ 26.2
GTEX-12WSD-0011-R10b-SM-5GU79 25.5
GTEX-13X6J-0011-R10b-SM-5PNWA 25.4
GTEX-13O3O-0011-R10a-SM-5LUA9 25.3
GTEX-12WSA-0011-R10b-SM-5P9ET 25.1
GTEX-YJ89-0011-R10a-SM-4SOK9 23.8
GTEX-12ZZZ-0011-R10a-SM-5P9HC 23.7
GTEX-OXRN-0011-R10A-SM-2I5GC 23.1
GTEX-Z93S-0011-R10a-SM-4RGNM 22.9
GTEX-13G51-0011-R10b-SM-5LZYF 22.6
GTEX-13NYB-0011-R10a-SM-5KM43 22.5
GTEX-13OW6-0011-R10a-SM-5L3HE 22.3
GTEX-ZV68-0011-R10a-SM-51MT7 22.1
GTEX-11WQC-0011-R10a-SM-57WCT 21.7
GTEX-RVPU-0011-R10A-SM-2XCAH 21.7
GTEX-147F4-0011-R10b-SM-5S2WC 21.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 21.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 20.6
GTEX-ZVT3-0011-R10b-SM-57WB6 20.2
GTEX-13IVO-0011-R10a-SM-5LZY3 18.6
GTEX-139TS-0011-R10a-SM-5K7TU 18.5
GTEX-14753-0011-R10b-SM-5S2WE 18.1
GTEX-12ZZW-0011-R10b-SM-5HL9X 17.3
GTEX-1477Z-0011-R10b-SM-5S2RF 17.0
GTEX-131XW-0011-R10a-SM-5DUVA 16.1
GTEX-13NZA-0011-R10b-SM-5KM54 15.1
GTEX-ZXG5-0011-R10a-SM-57WDD 15.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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