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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.4TPM
GTEx:18.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Not detected
 

Antibody staining

Antibody HPA042303

 

Endothelial cells

Medium  

Glial cells

Not detected  

Neuronal cells

Low  

Neuropil

Not detected  
 
 
 

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

33.4

N/A Male, age 5
Sample 1
TPM: 48.3
overview Female, age 40
Sample 2
TPM: 20.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 31.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

18.9

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 19.3
Samples: 114

Max RPKM: 41.8
Min RPKM: 5.8
Std RPKM: 7
Median RPKM: 18.7
GTEX-13OVJ-2826-SM-5L3GW 41.8
GTEX-ZE7O-3126-SM-5HL5X 37.0
GTEX-13JVG-3126-SM-5L3FH 34.9
GTEX-1117F-3226-SM-5N9CT 33.6
GTEX-144FL-3026-SM-5O99C 32.5
GTEX-QDT8-2926-SM-32PKC 31.1
GTEX-139T8-1026-SM-5J2MC 30.5
GTEX-11GSP-3226-SM-5986O 30.1
GTEX-ZZPT-3026-SM-5GZXH 30.0
GTEX-11TTK-2926-SM-5PNYP 29.9
GTEX-1445S-3026-SM-5O9BR 29.6
GTEX-PWO3-0926-SM-2I5EY 29.4
GTEX-11EMC-3226-SM-5EGKW 29.0
GTEX-13FHO-3026-SM-5J1O9 28.9
GTEX-14A5I-2926-SM-5Q5CQ 28.9
GTEX-NPJ7-2726-SM-2I3FT 28.7
GTEX-12WSA-2926-SM-5EQ4D 28.1
GTEX-12ZZW-2926-SM-5LZUP 28.1
GTEX-13OW7-3026-SM-5L3GY 26.9
GTEX-11WQK-3026-SM-5EQL6 26.4
GTEX-131XW-3126-SM-5LZUC 26.1
GTEX-12WSD-3126-SM-5HL7P 25.0
GTEX-11OC5-0726-SM-5P9JK 24.8
GTEX-13S7M-3126-SM-5RQJQ 24.6
GTEX-13JUV-2926-SM-5LZX7 24.4
GTEX-13X6K-2926-SM-5Q5D5 24.3
GTEX-ZVT3-3026-SM-5E43N 24.3
GTEX-QVUS-2826-SM-3GADB 24.2
GTEX-N7MT-1126-SM-5SI7V 23.3
GTEX-147GR-3026-SM-5S2ML 23.1
GTEX-1192X-3126-SM-5N9BY 22.6
GTEX-NPJ8-1526-SM-2D7VU 22.6
GTEX-13G51-3026-SM-5IJB8 22.5
GTEX-OXRN-2426-SM-2I5EQ 22.5
GTEX-1399T-3026-SM-5KLZC 22.3
GTEX-12ZZZ-3026-SM-5BC67 22.1
GTEX-13OW8-2826-SM-5L3GC 21.9
GTEX-11EI6-3026-SM-5GZZO 21.8
GTEX-13FHP-3026-SM-5IJBS 21.6
GTEX-R55F-1326-SM-5S2V4 21.5
GTEX-13PL6-3126-SM-5LUAR 21.3
GTEX-RU72-3026-SM-5SI7Y 20.8
GTEX-1128S-2726-SM-5H12C 20.7
GTEX-11GSO-2926-SM-5HL73 20.7
GTEX-13PVQ-3026-SM-5SI93 20.6
GTEX-132Q8-3026-SM-5PNVG 20.4
GTEX-144GL-3026-SM-5Q5CW 20.2
GTEX-QVJO-1426-SM-2S1QY 20.2
GTEX-13QIC-2926-SM-5J2NF 20.1
GTEX-145LS-3126-SM-5Q5BY 19.6
GTEX-QMR6-1426-SM-32PLA 19.6
GTEX-13IVO-2926-SM-5L3CZ 19.5
GTEX-13NYB-3026-SM-5IJD7 19.5
GTEX-XLM4-3026-SM-4AT6L 19.4
GTEX-145MG-3026-SM-5RQJA 19.0
GTEX-13X6J-3026-SM-5Q5CU 18.9
GTEX-111FC-3126-SM-5GZZ2 18.8
GTEX-145MF-2726-SM-5O995 18.6
GTEX-11NV4-2126-SM-5N9DS 18.5
GTEX-YJ89-3026-SM-5IFJI 18.4
GTEX-12ZZX-2926-SM-5GCOQ 17.9
GTEX-11DXW-1126-SM-5H12Q 17.8
GTEX-13NYS-3126-SM-5KLYV 17.8
GTEX-13OW6-3026-SM-5J2MI 17.6
GTEX-ZAK1-3026-SM-5S2MJ 17.1
GTEX-11NUK-2926-SM-5A5MD 17.0
GTEX-11ONC-2926-SM-5P9JM 17.0
GTEX-11PRG-2926-SM-5987A 17.0
GTEX-13OVH-3026-SM-5MR4N 16.9
GTEX-11GS4-3126-SM-5A5LH 16.7
GTEX-13O3O-3126-SM-5KM3H 16.7
GTEX-X4XX-3026-SM-3NMB2 16.5
GTEX-Q2AG-2926-SM-2HMJ3 16.4
GTEX-Y8DK-0826-SM-4TT3T 16.2
GTEX-12ZZY-3026-SM-5GCOU 16.1
GTEX-TSE9-3026-SM-3DB76 16.0
GTEX-11DXY-3226-SM-5GIDE 15.6
GTEX-14ASI-3026-SM-5S2PN 15.4
GTEX-11O72-2926-SM-5BC4V 14.9
GTEX-13FLW-1426-SM-5K7YE 14.9
GTEX-Y111-2726-SM-4TT3N 14.8
GTEX-13O3Q-2926-SM-5KM45 14.7
GTEX-12WSH-3026-SM-5CVNI 14.6
GTEX-WHSE-3026-SM-3P5ZH 14.3
GTEX-13NYC-2826-SM-5K7WR 14.1
GTEX-12126-1026-SM-5P9JJ 13.8
GTEX-12WSC-3026-SM-5GCNF 13.7
GTEX-YFC4-3126-SM-5PNV6 13.7
GTEX-WZTO-2926-SM-3NM9I 13.6
GTEX-131YS-3126-SM-5KLYT 13.5
GTEX-WWYW-3126-SM-3NB39 13.5
GTEX-XOTO-3026-SM-4B65M 13.4
GTEX-14BMV-3026-SM-5S2PQ 13.3
GTEX-13FXS-3126-SM-5J2NN 13.1
GTEX-ZYFD-3026-SM-5E44C 13.0
GTEX-RNOR-2326-SM-2TF4I 12.9
GTEX-ZUA1-3026-SM-59HJC 12.9
GTEX-13VXU-2926-SM-5LU5C 12.2
GTEX-145MH-3026-SM-5Q5DZ 11.9
GTEX-X585-3026-SM-46MWF 11.8
GTEX-ZAJG-3126-SM-5HL9J 11.5
GTEX-UTHO-3026-SM-3GAFB 11.4
GTEX-WVLH-3026-SM-3MJG9 11.2
GTEX-T6MN-2626-SM-32PMQ 10.3
GTEX-13SLX-3126-SM-5S2Q5 10.2
GTEX-1313W-3126-SM-5LZUI 10.0
GTEX-T5JC-2426-SM-3NMDB 9.8
GTEX-Z93S-2926-SM-57WB9 9.6
GTEX-117XS-3026-SM-5N9CA 9.0
GTEX-T2IS-3026-SM-32QPM 8.5
GTEX-11ZUS-2926-SM-5FQSL 8.4
GTEX-PVOW-2526-SM-2XCF7 6.7
GTEX-WL46-2926-SM-3LK82 5.9
GTEX-11OF3-2926-SM-5HL78 5.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 18.5
Samples: 108

Max RPKM: 47.8
Min RPKM: 3.8
Std RPKM: 8.6
Median RPKM: 17.4
GTEX-13OVJ-0011-R10b-SM-5L3HT 47.8
GTEX-12WSD-0011-R10b-SM-5GU79 45.4
GTEX-1445S-0011-R10a-SM-5PNWB 41.7
GTEX-ZV68-0011-R10a-SM-51MT7 36.2
GTEX-11H98-0011-R10b-SM-5NQ98 35.4
GTEX-11WQK-0011-R10a-SM-5BC6R 32.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 32.1
GTEX-13JVG-0011-R10b-SM-5KM2P 31.9
GTEX-12WSA-0011-R10b-SM-5P9ET 31.4
GTEX-11WQC-0011-R10a-SM-57WCT 30.7
GTEX-139TS-0011-R10a-SM-5K7TU 30.1
GTEX-13JUV-0011-R10b-SM-5LZXR 30.1
GTEX-13SLW-0011-R10a-SM-5S2UI 29.7
GTEX-1477Z-0011-R10b-SM-5S2RF 29.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 29.4
GTEX-131XW-0011-R10a-SM-5DUVA 28.6
GTEX-P44H-0011-R10A-SM-2XCEK 28.2
GTEX-13FHO-0011-R10b-SM-5J2MM 27.6
GTEX-13OW8-0011-R10a-SM-5L3H6 26.3
GTEX-14753-0011-R10b-SM-5S2WE 26.2
GTEX-TSE9-0011-R10A-SM-3DB7O 25.7
GTEX-XMD1-0011-R10A-SM-4AT4A 24.9
GTEX-147F4-0011-R10b-SM-5S2WC 24.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 24.2
GTEX-13N2G-0011-R10a-SM-5MR34 23.5
GTEX-145LU-0011-R10a-SM-5PNWJ 23.2
GTEX-14BIL-0011-R10a-SM-5SI75 23.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 23.1
GTEX-ZVT3-0011-R10b-SM-57WB6 22.9
GTEX-12ZZY-0011-R10b-SM-5HL7W 22.5
GTEX-ZE7O-0011-R10a-SM-57WAZ 22.3
GTEX-QVUS-0011-R10A-SM-3GIK3 22.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 21.9
GTEX-RVPU-0011-R10A-SM-2XCAH 21.9
GTEX-13FXS-0011-R10a-SM-5J2MA 21.6
GTEX-ZXG5-0011-R10a-SM-57WDD 21.6
GTEX-NL4W-0011-R10A-SM-2I3DY 20.9
GTEX-QDT8-0011-R10A-SM-32PKG 20.7
GTEX-ZUA1-0011-R10a-SM-51MT6 20.3
GTEX-13OW6-0011-R10a-SM-5L3HE 19.8
GTEX-QMR6-0011-R10A-SM-32PKO 19.7
GTEX-OXRO-0011-R10A-SM-2I5EH 19.5
GTEX-13X6I-0011-R10a-SM-5PNWI 19.3
GTEX-147GR-0011-R10b-SM-5S2UM 19.2
GTEX-ZDXO-0011-R10a-SM-4WWD8 18.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 18.5
GTEX-12126-0011-R10b-SM-5BC6T 18.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 18.4
GTEX-OXRN-0011-R10A-SM-2I5GC 18.4
GTEX-13NYS-0011-R10a-SM-5MR4S 18.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 17.8
GTEX-13NYB-0011-R10a-SM-5KM43 17.6
GTEX-13NZA-0011-R10b-SM-5KM54 17.5
GTEX-13O3O-0011-R10a-SM-5LUA9 17.5
GTEX-X4EP-0011-R10B-SM-4QASJ 17.4
GTEX-XLM4-0011-R10A-SM-4AT5P 17.0
GTEX-N7MT-0011-R10A-SM-2I3E1 16.8
GTEX-X261-0011-R10B-SM-4E3JT 16.7
GTEX-YJ89-0011-R10a-SM-4SOK9 16.6
GTEX-13OVL-0011-R10a-SM-5L3GS 16.3
GTEX-ZVZQ-0011-R10b-SM-51MRT 16.1
GTEX-12WSM-0011-R10a-SM-5DUWV 15.6
GTEX-13X6K-0011-R10a-SM-5P9JR 15.5
GTEX-13QJC-0011-R10a-SM-5SI63 14.9
GTEX-11ZUS-0011-R10b-SM-5BC79 14.7
GTEX-Z93S-0011-R10a-SM-4RGNM 14.6
GTEX-13G51-0011-R10b-SM-5LZYF 14.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 14.2
GTEX-13OW7-0011-R10a-SM-5L3H3 14.0
GTEX-ZF28-0011-R10a-SM-4WWEH 13.9
GTEX-145LS-0011-R10a-SM-5PNUQ 13.7
GTEX-13CZV-0011-R10b-SM-5LZYD 13.6
GTEX-13S7M-0011-R10b-SM-5PNZB 13.6
GTEX-145MG-0011-R10a-SM-5PNWG 13.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC 13.0
GTEX-QVJO-0011-R10A-SM-2S1QJ 12.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 12.5
GTEX-13QIC-0011-R10a-SM-5O9C7 12.5
GTEX-13FLW-0011-R10b-SM-5LZZF 12.4
GTEX-WWYW-0011-R10A-SM-3NB35 12.1
GTEX-12WSF-0011-R10a-SM-5LZVH 11.9
GTEX-13IVO-0011-R10a-SM-5LZY3 11.9
GTEX-12WSH-0011-R10a-SM-5LZUS 11.5
GTEX-X4XX-0011-R10B-SM-46MWO 11.5
GTEX-N7MS-0011-R10A-SM-2HMJK 11.4
GTEX-13X6J-0011-R10b-SM-5PNWA 11.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 10.6
GTEX-14BIN-0011-R10a-SM-5S2UA 10.6
GTEX-WZTO-0011-R10B-SM-4E3KB 10.5
GTEX-T5JC-0011-R10A-SM-32PM2 10.4
GTEX-131XH-0011-R10a-SM-5EGLJ 10.3
GTEX-Y8DK-0011-R10A-SM-4SOK1 10.2
GTEX-YFC4-0011-R10a-SM-4SOK5 10.0
GTEX-13O3Q-0011-R10b-SM-5KM39 9.9
GTEX-S7SE-0011-R10A-SM-2XCDF 9.8
GTEX-131YS-0011-R10b-SM-5EQ5N 9.7
GTEX-12WSC-0011-R10a-SM-5GU57 9.6
GTEX-13SLX-0011-R10a-SM-5P9HV 9.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 9.5
GTEX-13N1W-0011-R10b-SM-5MR4H 9.1
GTEX-145MH-0011-R10b-SM-5PNUK 7.5
GTEX-WVLH-0011-R10A-SM-3MJFM 7.1
GTEX-12WSE-0011-R10b-SM-5P9JV 6.6
GTEX-T6MN-0011-R10A-SM-32QP7 6.0
GTEX-1313W-0011-R10b-SM-5DUXA 5.8
GTEX-NL3H-0011-R10A-SM-2I3E9 5.4
GTEX-X585-0011-R10A-SM-46MUY 5.0
GTEX-WL46-0011-R10A-SM-3MJFQ 3.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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