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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:26.2TPM
GTEx:16.8RPKM
FANTOM5:93.4Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Glandular cells:Medium
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA011088

 

Antibody HPA012123

 

Antibody CAB037128

 

Antibody CAB037288

 

Adipocytes

Not detected   Not detected   Not detected   Not detected  

Glandular cells

Medium   Low   High   High  

Myoepithelial cells

Low   Not detected   High   High  
       
       

BREAST - HPA RNA-seq

Average TPM

26.2

overview Female, age 52
Sample 1
TPM: 21.9
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80
Sample 2
TPM: 31.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47
Sample 3
TPM: 28.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38
Sample 4
TPM: 22.8
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

16.8

GTEx sample id

RPKM

 

Breast - Mammary Tissue

Breast - Mammary Tissue
RPKM: 16.8
Samples: 214

Max RPKM: 28.6
Min RPKM: 9.6
Std RPKM: 3
Median RPKM: 16.4
GTEX-Y3I4-1526-SM-4TT7K 28.6
GTEX-12WSK-2226-SM-5GCO5 28.3
GTEX-11TUW-1826-SM-5BC5D 27.6
GTEX-RUSQ-2026-SM-4GIAK 26.3
GTEX-12WSN-1326-SM-5GCNT 25.7
GTEX-11P7K-0726-SM-5EGKX 23.5
GTEX-117YX-1426-SM-5H12H 22.6
GTEX-145MN-1926-SM-5SIAI 22.3
GTEX-13CF3-2126-SM-5IFJP 22.2
GTEX-13N1W-0626-SM-5MR4U 22.2
GTEX-WYJK-1326-SM-3NB2T 22.2
GTEX-TKQ1-0226-SM-33HB5 21.9
GTEX-WY7C-2726-SM-3NB3P 21.5
GTEX-T6MN-0726-SM-32PML 21.4
GTEX-RWS6-1926-SM-47JXY 21.3
GTEX-Y5V6-2126-SM-4WWFX 21.3
GTEX-WYBS-0926-SM-3NM94 21.2
GTEX-ZXES-0826-SM-5E43C 21.2
GTEX-11LCK-2426-SM-5HL5F 21.0
GTEX-ZV7C-1826-SM-5NQ83 21.0
GTEX-ZVT4-1026-SM-57WC4 21.0
GTEX-1269C-2426-SM-5FQSN 20.5
GTEX-13O61-1826-SM-5KM4I 20.5
GTEX-13NZB-2126-SM-5MR4Y 20.4
GTEX-13W3W-1226-SM-5LU4H 20.4
GTEX-XBED-1626-SM-47JYN 20.4
GTEX-U3ZH-1426-SM-4DXSR 20.2
GTEX-14E6E-1326-SM-5S2NR 20.1
GTEX-YEC3-1026-SM-5IFI5 20.0
GTEX-ZY6K-1626-SM-5GZWV 20.0
GTEX-ZLV1-1426-SM-4WWES 19.9
GTEX-ZF29-1926-SM-5S2P1 19.8
GTEX-ZQUD-1926-SM-51MSA 19.8
GTEX-145LT-0726-SM-5S2VM 19.7
GTEX-13S86-1226-SM-5S2OA 19.5
GTEX-QEG5-0726-SM-4R1JQ 19.5
GTEX-1122O-1226-SM-5H113 19.4
GTEX-11PRG-0826-SM-5EQ6A 19.4
GTEX-11EQ9-1826-SM-5Q5AJ 19.2
GTEX-1399U-1826-SM-5PNZ1 19.1
GTEX-WFON-1826-SM-3GILG 19.1
GTEX-XUJ4-1926-SM-4BOOV 19.0
GTEX-11I78-2226-SM-5PNYA 18.9
GTEX-ZDXO-0126-SM-5S2ND 18.9
GTEX-12WSM-1726-SM-5BC6J 18.8
GTEX-11GS4-2126-SM-5A5KR 18.7
GTEX-131YS-0626-SM-5EGKL 18.7
GTEX-QVJO-1826-SM-447C9 18.7
GTEX-Q2AG-0326-SM-48U1O 18.6
GTEX-T5JC-2126-SM-32PMO 18.6
GTEX-Y114-2026-SM-4TT7L 18.6
GTEX-YJ8O-2226-SM-5IFHW 18.6
GTEX-XUW1-2326-SM-4BOO5 18.5
GTEX-ZTX8-1226-SM-4YCE9 18.5
GTEX-XOT4-0726-SM-4GIAW 18.4
GTEX-1211K-1926-SM-5EQLB 18.3
GTEX-13FTW-1426-SM-5LZWZ 18.3
GTEX-WRHU-0326-SM-3MJFY 18.3
GTEX-XQ8I-2426-SM-4WAXY 18.3
GTEX-X4XY-0926-SM-4E3JD 18.2
GTEX-S32W-2026-SM-4AD6E 18.1
GTEX-ZT9W-2026-SM-51MRA 18.1
GTEX-13113-1726-SM-5GCOO 17.9
GTEX-13NZ9-1026-SM-5MR5K 17.9
GTEX-ZDTT-2126-SM-5S2OJ 17.9
GTEX-ZDYS-1126-SM-5K7UB 17.9
GTEX-ZYW4-0826-SM-5GIDG 17.9
GTEX-WXYG-2226-SM-4E3IM 17.8
GTEX-YFCO-1826-SM-4W1YH 17.8
GTEX-ZF2S-2026-SM-5E461 17.8
GTEX-S341-1526-SM-4AD6K 17.7
GTEX-SIU7-1626-SM-4BRUK 17.7
GTEX-12ZZX-1126-SM-5EGKB 17.6
GTEX-RU72-0626-SM-46MUI 17.6
GTEX-ZUA1-1526-SM-59HLS 17.6
GTEX-12WSB-0626-SM-59HJO 17.5
GTEX-R55F-1726-SM-2TF4R 17.5
GTEX-ZU9S-1926-SM-5NQBP 17.5
GTEX-132AR-0826-SM-5EGK6 17.4
GTEX-ZZPU-0626-SM-5E43T 17.4
GTEX-11WQC-1726-SM-5GU4W 17.3
GTEX-R55D-0826-SM-48FEA 17.3
GTEX-ZVT2-1826-SM-5NQ8W 17.3
GTEX-11TT1-2126-SM-5GU5Y 17.2
GTEX-13CF2-2026-SM-5K7VI 17.2
GTEX-111YS-1926-SM-5GICC 17.1
GTEX-139TU-0626-SM-5KM3X 17.1
GTEX-13D11-1026-SM-5IJFB 17.1
GTEX-X261-0626-SM-3NMD9 17.1
GTEX-Y111-2026-SM-4SOJA 17.1
GTEX-13PL6-2926-SM-5L3I2 17.0
GTEX-145ME-1526-SM-5Q5F2 17.0
GTEX-Y8LW-1626-SM-5IFHX 17.0
GTEX-11EMC-2026-SM-5A5JV 16.9
GTEX-11ZTT-2326-SM-5EQLG 16.8
GTEX-11ZUS-0826-SM-5FQUY 16.8
GTEX-13OW5-2226-SM-5L3HC 16.8
GTEX-S4P3-1326-SM-4AD6V 16.8
GTEX-ZA64-1526-SM-5CVMD 16.8
GTEX-144GL-2026-SM-5LU3O 16.7
GTEX-U8XE-0826-SM-4E3J1 16.7
GTEX-XGQ4-0926-SM-4AT4U 16.7
GTEX-Y3IK-2326-SM-4WWDT 16.6
GTEX-ZYWO-2326-SM-5GZY4 16.5
GTEX-S4Q7-1126-SM-4AD6R 16.4
GTEX-T5JW-2026-SM-4DM63 16.4
GTEX-U412-1826-SM-4DXTJ 16.4
GTEX-147F4-2826-SM-5NQBN 16.3
GTEX-T6MO-0326-SM-32QOK 16.3
GTEX-UPK5-2326-SM-3P5Z8 16.3
GTEX-VUSG-2226-SM-4KKZO 16.3
GTEX-YB5K-1626-SM-5IFIN 16.3
GTEX-ZAJG-0626-SM-5HL8X 16.3
GTEX-ZC5H-2626-SM-5J2MG 16.3
GTEX-ZVTK-0326-SM-51MRR 16.3
GTEX-11WQK-2426-SM-5GU5C 16.2
GTEX-133LE-1726-SM-5K7VQ 16.2
GTEX-PSDG-1626-SM-48TCQ 16.2
GTEX-Y5V5-2126-SM-4WWFO 16.2
GTEX-ZV6S-1826-SM-5NQ8D 16.2
GTEX-1117F-2826-SM-5GZXL 16.1
GTEX-QEL4-2126-SM-447AE 16.0
GTEX-14ABY-2126-SM-5QGQZ 15.9
GTEX-R3RS-0626-SM-48FE1 15.9
GTEX-REY6-2426-SM-48FF5 15.9
GTEX-S33H-0326-SM-4AD6N 15.9
GTEX-T2IS-1526-SM-32QPR 15.9
GTEX-TML8-1226-SM-32QON 15.9
GTEX-TMMY-0726-SM-33HBE 15.9
GTEX-Y9LG-1426-SM-5IFJZ 15.9
GTEX-11EI6-0626-SM-5985T 15.8
GTEX-R53T-1526-SM-48FEK 15.7
GTEX-11OF3-1926-SM-59889 15.6
GTEX-132NY-0826-SM-5K7Y7 15.6
GTEX-146FH-0826-SM-5SI8T 15.6
GTEX-X15G-1626-SM-3NMB3 15.6
GTEX-Y5LM-1726-SM-4VDSX 15.6
GTEX-ZLFU-2126-SM-4WWEV 15.6
GTEX-13W46-0826-SM-5LU3H 15.5
GTEX-13PVQ-1026-SM-5KM3M 15.4
GTEX-13QIC-2326-SM-5LU5N 15.4
GTEX-145MO-0826-SM-5NQBL 15.4
GTEX-X4EP-2926-SM-3P5YQ 15.4
GTEX-139T6-1626-SM-5PNYZ 15.3
GTEX-13FTY-2226-SM-5J1ND 15.3
GTEX-13O3P-0826-SM-5L3DH 15.3
GTEX-QMRM-1626-SM-4R1KV 15.3
GTEX-UJHI-1426-SM-3DB9C 15.3
GTEX-ZYT6-0126-SM-5E45J 15.3
GTEX-11P81-1926-SM-5BC53 15.1
GTEX-XQ3S-1326-SM-4BOPQ 15.1
GTEX-117XS-1926-SM-5GICO 15.0
GTEX-11ONC-2126-SM-5HL6E 15.0
GTEX-12KS4-0126-SM-5Q5A5 15.0
GTEX-WOFL-0826-SM-3MJG1 15.0
GTEX-11NV4-2026-SM-5N9DG 14.9
GTEX-13O3Q-2226-SM-5KM4O 14.9
GTEX-U3ZN-1926-SM-4DXSG 14.9
GTEX-VJWN-0726-SM-3GIJ8 14.9
GTEX-YB5E-1726-SM-5IFJ3 14.9
GTEX-ZEX8-2226-SM-57WC6 14.9
GTEX-13N11-1726-SM-5J1OJ 14.8
GTEX-T2YK-2226-SM-32QPT 14.8
GTEX-11P82-1326-SM-5HL62 14.6
GTEX-13NZ8-0126-SM-5IJCT 14.6
GTEX-QDT8-0626-SM-48TYW 14.6
GTEX-UTHO-1026-SM-3GAF7 14.6
GTEX-XYKS-1326-SM-4BRUN 14.6
GTEX-11NSD-0926-SM-5N9DR 14.5
GTEX-XMD1-0826-SM-4AT52 14.5
GTEX-XMD2-0926-SM-4WWEF 14.5
GTEX-XV7Q-2326-SM-4BRVZ 14.5
GTEX-ZQG8-0726-SM-5P9H9 14.5
GTEX-SE5C-2126-SM-4BRUJ 14.4
GTEX-ZYFC-0826-SM-5E44K 14.3
GTEX-12BJ1-1826-SM-5HL9N 14.2
GTEX-11DXZ-1926-SM-5GZZL 14.1
GTEX-ZF3C-2326-SM-5S2MZ 14.1
GTEX-11O72-2126-SM-5N9FO 14.0
GTEX-S7SE-0826-SM-4AT4D 14.0
GTEX-ZZ64-1226-SM-5E43R 14.0
GTEX-11EM3-1326-SM-5N9C6 13.9
GTEX-13OW8-0226-SM-5K7UP 13.9
GTEX-WI4N-1426-SM-3LK7H 13.9
GTEX-11DXW-0626-SM-5N9ER 13.8
GTEX-13FTX-1126-SM-5N9EN 13.8
GTEX-144GM-0926-SM-5O994 13.8
GTEX-13O3O-0826-SM-5K7WE 13.7
GTEX-WYVS-1726-SM-3NMAY 13.7
GTEX-11DXY-2326-SM-5GICW 13.5
GTEX-14AS3-1626-SM-5S2OY 13.4
GTEX-ZAB4-2526-SM-5HL8M 13.4
GTEX-W5X1-2326-SM-3GIL6 13.3
GTEX-11GSO-1926-SM-5A5K3 13.2
GTEX-132Q8-1426-SM-5EGK7 13.2
GTEX-13FHO-0826-SM-5L3E8 13.2
GTEX-S4UY-0726-SM-4AD6X 13.2
GTEX-ZVE2-1226-SM-5NQ8R 13.2
GTEX-YFC4-1426-SM-5IFJG 13.1
GTEX-Y8E4-1626-SM-5S2MW 13.0
GTEX-ZPIC-1126-SM-5BC7F 12.8
GTEX-131XW-0726-SM-5EGK3 12.7
GTEX-14753-2426-SM-5LU8U 12.7
GTEX-TKQ2-1826-SM-33HB2 12.7
GTEX-ZVZQ-0826-SM-51MRF 12.7
GTEX-ZTTD-1026-SM-51MRD 12.5
GTEX-ZWKS-2826-SM-5NQ74 12.5
GTEX-139T8-0826-SM-5L3DE 12.4
GTEX-1192X-2326-SM-5987X 12.2
GTEX-1314G-1226-SM-5BC6D 12.1
GTEX-1313W-0826-SM-5EQ4T 11.6
GTEX-XMK1-1126-SM-4IHJ8 11.2
GTEX-XUZC-1626-SM-4BRVP 9.7
GTEX-11DZ1-0326-SM-5N9BN 9.6
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

93.4

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 93.4
FF:10080-102A8 77 years, female 93.4

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