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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:14.9RPKM
FANTOM5:34.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA011088

 

Antibody HPA012123

 

Antibody CAB037128

 

Antibody CAB037288

 

Glial cells

Not detected   Not detected   Not detected   Not detected  

Neuronal cells

Not detected   Not detected   Low   High  
       
       
       

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

14.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 14.9
Samples: 117

Max RPKM: 26.9
Min RPKM: 4.7
Std RPKM: 5.3
Median RPKM: 14.9
GTEX-13G51-0011-R5a-SM-5L3EB 26.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 26.5
GTEX-131YS-0011-R5b-SM-5K7YB 26.4
GTEX-WHSE-0011-R5A-SM-3P5ZO 24.4
GTEX-T5JC-0011-R5A-SM-32PLK 24.2
GTEX-S7SE-0011-R5A-SM-2XCDA 23.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 23.2
GTEX-145MH-0011-R5a-SM-5P9JT 22.4
GTEX-QVJO-0011-R5A-SM-2S1QM 22.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 21.9
GTEX-1313W-0011-R5b-SM-5L3EP 21.8
GTEX-13SLX-0011-R5a-SM-5O9BV 21.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 21.6
GTEX-11OF3-0011-R5a-SM-57WB4 21.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 21.2
GTEX-145LS-0011-R5a-SM-5SI65 20.9
GTEX-13X6J-0011-R5b-SM-5PNWT 20.5
GTEX-XMD1-0011-R5A-SM-4AT47 20.3
GTEX-13OW6-0011-R5a-SM-5O9BK 20.2
GTEX-14BIM-0011-R5b-SM-5S2RM 20.1
GTEX-RU72-0011-R5A-SM-2TF6U 19.9
GTEX-T6MN-0011-R5A-SM-32QPD 19.9
GTEX-11GSP-0011-R5a-SM-57WBE 19.8
GTEX-132Q8-0011-R5a-SM-5IJDM 19.7
GTEX-1399T-0011-R5b-SM-5IJDK 19.7
GTEX-12WSC-0011-R5b-SM-5CVNS 19.4
GTEX-13VXU-0011-R5a-SM-5O9D7 19.4
GTEX-11H98-0011-R5b-SM-57WCF 19.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 19.3
GTEX-T2IS-0011-R5A-SM-32QP4 19.3
GTEX-P44H-0011-R5A-SM-2XCEX 19.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 18.8
GTEX-N7MT-0011-R5a-SM-2I3G6 18.6
GTEX-13JUV-0011-R5a-SM-5LZY5 18.5
GTEX-13X6K-0011-R5b-SM-5PNUE 18.5
GTEX-14ABY-0011-R5b-SM-5SI7B 18.5
GTEX-N7MS-0011-R5a-SM-2HMK8 18.3
GTEX-WL46-0011-R5A-SM-3LK6V 18.2
GTEX-R55E-0011-R5A-SM-2TC5N 18.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 18.0
GTEX-WZTO-0011-R5B-SM-3NMC5 18.0
GTEX-WWYW-0011-R5A-SM-3NB3E 17.9
GTEX-13OVL-0011-R5b-SM-5L3FU 17.6
GTEX-13S7M-0011-R5b-SM-5P9HS 17.6
GTEX-WVLH-0011-R5A-SM-3MJFW 17.6
GTEX-ZUA1-0011-R5b-SM-51MTG 17.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 16.8
GTEX-PVOW-0011-R5A-SM-32PL7 16.2
GTEX-13FXS-0011-R5b-SM-5LZYE 16.1
GTEX-13O3O-0011-R5b-SM-5KM44 16.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 16.0
GTEX-13NYS-0011-R5a-SM-5MR4D 15.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 15.7
GTEX-RVPU-0011-R5A-SM-2XCAD 15.4
GTEX-UTHO-0011-R5A-SM-3GIJD 15.4
GTEX-13OW7-0011-R5b-SM-5O9DM 15.2
GTEX-13X6I-0011-R5a-SM-5PNWW 15.1
GTEX-12WSF-0011-R5a-SM-5HL8K 15.0
GTEX-ZE7O-0011-R5a-SM-57WBO 14.9
GTEX-11NV4-0011-R5a-SM-5NQ88 14.8
GTEX-13FLW-0011-R5a-SM-5LZX6 14.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 14.3
GTEX-13OW5-0011-R5b-SM-5L3FR 14.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 14.1
GTEX-13CZV-0011-R5a-SM-5K7XA 13.9
GTEX-12WSD-0011-R5b-SM-5CVNG 13.7
GTEX-139TT-0011-R5b-SM-5K7W8 13.7
GTEX-13OVH-0011-R5b-SM-5KM4L 13.7
GTEX-OHPN-0011-R5A-SM-2I5FF 13.4
GTEX-X585-0011-R5A-SM-46MVI 13.4
GTEX-TSE9-0011-R5A-SM-3DB7J 13.3
GTEX-Z93S-0011-R5b-SM-4RGNI 13.3
GTEX-RVPV-0011-R5A-SM-2TF69 13.2
GTEX-12ZZX-0011-R5a-SM-5HL89 13.1
GTEX-NL4W-0011-R5a-SM-2I3GD 13.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 12.6
GTEX-12WSB-0011-R5b-SM-5GU67 12.3
GTEX-13NYB-0011-R5a-SM-5MR45 12.1
GTEX-13JVG-0011-R5a-SM-5MR4O 12.0
GTEX-ZXG5-0011-R5b-SM-57WBN 11.6
GTEX-YFC4-0011-R5a-SM-4RGLR 11.5
GTEX-13FLV-0011-R5a-SM-5LZWT 11.3
GTEX-14BIN-0011-R5b-SM-5SI78 11.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 11.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 10.9
GTEX-OXRN-0011-R5A-SM-2I5EF 10.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 10.8
GTEX-XOTO-0011-R5A-SM-4B657 10.5
GTEX-1445S-0011-R5a-SM-5PNUS 10.4
GTEX-139TS-0011-R5b-SM-5J2MZ 10.2
GTEX-13CIG-0011-R5b-SM-5L3F2 10.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 9.9
GTEX-144GO-0011-R5a-SM-5PNUR 9.5
GTEX-NL3H-0011-R5a-SM-2I3GB 9.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 9.1
GTEX-144GL-0011-R5b-SM-5PNUJ 8.9
GTEX-X261-0011-R5A-SM-3NMB4 8.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 8.8
GTEX-X4XX-0011-R5A-SM-46MWN 8.5
GTEX-QMR6-0011-R5A-SM-32PKT 8.3
GTEX-YJ89-0011-R5a-SM-4V6GM 8.2
GTEX-139T8-0011-R5b-SM-5J1MO 7.9
GTEX-ZVT3-0011-R5a-SM-51MSI 7.7
GTEX-11UD1-0011-R5b-SM-5P9FP 7.6
GTEX-13112-0011-R5b-SM-5DUV8 7.6
GTEX-ZV68-0011-R5a-SM-4YCDW 7.6
GTEX-11WQC-0011-R5a-SM-5BC74 7.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 7.5
GTEX-NPJ7-0011-R5a-SM-33HBK 7.5
GTEX-S7PM-0011-R5A-SM-3NM8G 7.4
GTEX-12WSA-0011-R5b-SM-5GU5I 6.7
GTEX-13FHP-0011-R5b-SM-5LZY2 6.2
GTEX-1477Z-0011-R5b-SM-5PNUO 5.9
GTEX-13CF2-0011-R5a-SM-5LZWS 5.7
GTEX-145MG-0011-R5b-SM-5S2VU 5.3
GTEX-12WSH-0011-R5b-SM-5P9F3 5.0
GTEX-13NZA-0011-R5b-SM-5KM4K 4.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

34.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 34.2
FF:10379-105H1 89 years, female 45.8
FF:10164-103B2 76 years, female 22.5

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