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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:54.5TPM
GTEx:13.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:Medium
Neuropil:Not detected
 

Antibody staining

Antibody HPA011088

 

Antibody HPA012123

 

Antibody CAB037128

 

Antibody CAB037288

 

Endothelial cells

Not detected   Not detected   Medium   High  

Glial cells

Not detected   Not detected   Low   Medium  

Neuronal cells

Medium   Medium   High   High  

Neuropil

Not detected   Not detected   Not detected   Medium  
       
       
       

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

54.5

N/A Male, age 5
Sample 1
TPM: 61.8
overview Female, age 40
Sample 2
TPM: 36.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 65.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

RPKM

12.514.415.88.419.1024681012141618202224
 
12.514.415.88.419.1024681012141618202224

Brain - Cortex

Brain - Cortex
RPKM: 14.1
Samples: 114

Max RPKM: 24.5
Min RPKM: 6.9
Std RPKM: 2.6
Median RPKM: 14.3
GTEX-WHSE-3026-SM-3P5ZH 24.5
GTEX-T5JC-2426-SM-3NMDB 20.8
GTEX-ZYFD-3026-SM-5E44C 19.1
GTEX-12ZZX-2926-SM-5GCOQ 18.4
GTEX-WL46-2926-SM-3LK82 18.0
GTEX-WZTO-2926-SM-3NM9I 17.8
GTEX-14BMV-3026-SM-5S2PQ 17.7
GTEX-QVJO-1426-SM-2S1QY 17.5
GTEX-RNOR-2326-SM-2TF4I 17.2
GTEX-13FLW-1426-SM-5K7YE 17.1
GTEX-13SLX-3126-SM-5S2Q5 17.1
GTEX-12126-1026-SM-5P9JJ 17.0
GTEX-1313W-3126-SM-5LZUI 17.0
GTEX-YFC4-3126-SM-5PNV6 16.9
GTEX-WWYW-3126-SM-3NB39 16.8
GTEX-X4XX-3026-SM-3NMB2 16.8
GTEX-11DXW-1126-SM-5H12Q 16.5
GTEX-XOTO-3026-SM-4B65M 16.4
GTEX-14ASI-3026-SM-5S2PN 16.2
GTEX-T6MN-2626-SM-32PMQ 16.2
GTEX-WVLH-3026-SM-3MJG9 16.2
GTEX-13VXU-2926-SM-5LU5C 16.1
GTEX-144GL-3026-SM-5Q5CW 16.1
GTEX-T2IS-3026-SM-32QPM 16.0
GTEX-PVOW-2526-SM-2XCF7 15.9
GTEX-Z93S-2926-SM-57WB9 15.9
GTEX-131YS-3126-SM-5KLYT 15.8
GTEX-13NYC-2826-SM-5K7WR 15.8
GTEX-Q2AG-2926-SM-2HMJ3 15.8
GTEX-YJ89-3026-SM-5IFJI 15.7
GTEX-13OW8-2826-SM-5L3GC 15.6
GTEX-NPJ8-1526-SM-2D7VU 15.6
GTEX-OXRN-2426-SM-2I5EQ 15.6
GTEX-XLM4-3026-SM-4AT6L 15.6
GTEX-ZUA1-3026-SM-59HJC 15.6
GTEX-12WSC-3026-SM-5GCNF 15.5
GTEX-11DXY-3226-SM-5GIDE 15.3
GTEX-13FXS-3126-SM-5J2NN 15.3
GTEX-13NYS-3126-SM-5KLYV 15.3
GTEX-13OW6-3026-SM-5J2MI 15.3
GTEX-145LS-3126-SM-5Q5BY 15.3
GTEX-RU72-3026-SM-5SI7Y 15.3
GTEX-14A5I-2926-SM-5Q5CQ 15.1
GTEX-R55F-1326-SM-5S2V4 15.1
GTEX-1128S-2726-SM-5H12C 15.0
GTEX-131XW-3126-SM-5LZUC 14.9
GTEX-13QIC-2926-SM-5J2NF 14.9
GTEX-TSE9-3026-SM-3DB76 14.9
GTEX-11NUK-2926-SM-5A5MD 14.8
GTEX-11ZUS-2926-SM-5FQSL 14.8
GTEX-12ZZY-3026-SM-5GCOU 14.8
GTEX-132Q8-3026-SM-5PNVG 14.8
GTEX-11GSO-2926-SM-5HL73 14.7
GTEX-145MF-2726-SM-5O995 14.7
GTEX-11PRG-2926-SM-5987A 14.6
GTEX-13O3Q-2926-SM-5KM45 14.6
GTEX-ZVT3-3026-SM-5E43N 14.4
GTEX-13FHO-3026-SM-5J1O9 14.3
GTEX-ZAK1-3026-SM-5S2MJ 14.3
GTEX-145MH-3026-SM-5Q5DZ 14.2
GTEX-13OVH-3026-SM-5MR4N 14.1
GTEX-NPJ7-2726-SM-2I3FT 14.0
GTEX-ZAJG-3126-SM-5HL9J 14.0
GTEX-111FC-3126-SM-5GZZ2 13.9
GTEX-1192X-3126-SM-5N9BY 13.9
GTEX-145MG-3026-SM-5RQJA 13.8
GTEX-QMR6-1426-SM-32PLA 13.8
GTEX-11ONC-2926-SM-5P9JM 13.7
GTEX-117XS-3026-SM-5N9CA 13.5
GTEX-13PL6-3126-SM-5LUAR 13.5
GTEX-13JUV-2926-SM-5LZX7 13.4
GTEX-ZZPT-3026-SM-5GZXH 13.4
GTEX-11EI6-3026-SM-5GZZO 13.3
GTEX-12ZZW-2926-SM-5LZUP 13.3
GTEX-1399T-3026-SM-5KLZC 13.1
GTEX-139T8-1026-SM-5J2MC 13.0
GTEX-12WSH-3026-SM-5CVNI 12.9
GTEX-11GS4-3126-SM-5A5LH 12.8
GTEX-13O3O-3126-SM-5KM3H 12.8
GTEX-ZE7O-3126-SM-5HL5X 12.7
GTEX-13FHP-3026-SM-5IJBS 12.6
GTEX-13S7M-3126-SM-5RQJQ 12.6
GTEX-13X6K-2926-SM-5Q5D5 12.6
GTEX-Y111-2726-SM-4TT3N 12.6
GTEX-1117F-3226-SM-5N9CT 12.5
GTEX-11O72-2926-SM-5BC4V 12.5
GTEX-13NYB-3026-SM-5IJD7 12.5
GTEX-11EMC-3226-SM-5EGKW 12.4
GTEX-13JVG-3126-SM-5L3FH 12.3
GTEX-QDT8-2926-SM-32PKC 12.3
GTEX-X585-3026-SM-46MWF 12.3
GTEX-QVUS-2826-SM-3GADB 12.2
GTEX-Y8DK-0826-SM-4TT3T 12.1
GTEX-12ZZZ-3026-SM-5BC67 11.8
GTEX-12WSD-3126-SM-5HL7P 11.5
GTEX-13OVJ-2826-SM-5L3GW 11.5
GTEX-UTHO-3026-SM-3GAFB 11.5
GTEX-11OF3-2926-SM-5HL78 11.4
GTEX-11WQK-3026-SM-5EQL6 11.1
GTEX-1445S-3026-SM-5O9BR 11.0
GTEX-13OW7-3026-SM-5L3GY 10.6
GTEX-13X6J-3026-SM-5Q5CU 10.4
GTEX-11OC5-0726-SM-5P9JK 10.0
GTEX-144FL-3026-SM-5O99C 10.0
GTEX-13IVO-2926-SM-5L3CZ 9.9
GTEX-11GSP-3226-SM-5986O 9.8
GTEX-147GR-3026-SM-5S2ML 9.7
GTEX-PWO3-0926-SM-2I5EY 9.7
GTEX-N7MT-1126-SM-5SI7V 9.4
GTEX-13PVQ-3026-SM-5SI93 9.1
GTEX-12WSA-2926-SM-5EQ4D 8.8
GTEX-11NV4-2126-SM-5N9DS 8.4
GTEX-11TTK-2926-SM-5PNYP 8.4
GTEX-13G51-3026-SM-5IJB8 6.9
Show all
10.813.615.16.819.5024681012141618
 
10.813.615.16.819.5024681012141618

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 13.1
Samples: 108

Max RPKM: 19.5
Min RPKM: 6.8
Std RPKM: 3
Median RPKM: 13.5
GTEX-T5JC-0011-R10A-SM-32PM2 19.5
GTEX-13X6K-0011-R10a-SM-5P9JR 18.6
GTEX-12WSE-0011-R10b-SM-5P9JV 18.4
GTEX-Q2AG-0011-R10A-SM-2HMLA 18.4
GTEX-131XH-0011-R10a-SM-5EGLJ 18.3
GTEX-NPJ8-0011-R10A-SM-2YUMO 17.9
GTEX-12ZZX-0011-R10b-SM-5DUWK 17.6
GTEX-13S7M-0011-R10b-SM-5PNZB 17.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 17.6
GTEX-WZTO-0011-R10B-SM-4E3KB 17.6
GTEX-X4XX-0011-R10B-SM-46MWO 17.5
GTEX-145MG-0011-R10a-SM-5PNWG 16.8
GTEX-WVLH-0011-R10A-SM-3MJFM 16.7
GTEX-Z93S-0011-R10a-SM-4RGNM 16.5
GTEX-13OVL-0011-R10a-SM-5L3GS 16.4
GTEX-NL3H-0011-R10A-SM-2I3E9 16.4
GTEX-12WSM-0011-R10a-SM-5DUWV 16.0
GTEX-13FHO-0011-R10b-SM-5J2MM 16.0
GTEX-11H98-0011-R10b-SM-5NQ98 15.9
GTEX-14ASI-0011-R10b-SM-5S2VZ 15.8
GTEX-NPJ7-0011-R10A-SM-2I3E5 15.7
GTEX-YFC4-0011-R10a-SM-4SOK5 15.5
GTEX-YJ89-0011-R10a-SM-4SOK9 15.5
GTEX-1313W-0011-R10b-SM-5DUXA 15.4
GTEX-145MH-0011-R10b-SM-5PNUK 15.3
GTEX-12WSF-0011-R10a-SM-5LZVH 15.2
GTEX-14BIL-0011-R10a-SM-5SI75 15.2
GTEX-S7SE-0011-R10A-SM-2XCDF 15.1
GTEX-N7MT-0011-R10A-SM-2I3E1 15.0
GTEX-XLM4-0011-R10A-SM-4AT5P 15.0
GTEX-ZF28-0011-R10a-SM-4WWEH 15.0
GTEX-131YS-0011-R10b-SM-5EQ5N 14.9
GTEX-13OW6-0011-R10a-SM-5L3HE 14.9
GTEX-WWYW-0011-R10A-SM-3NB35 14.9
GTEX-12WSH-0011-R10a-SM-5LZUS 14.8
GTEX-147GR-0011-R10b-SM-5S2UM 14.7
GTEX-ZVZQ-0011-R10b-SM-51MRT 14.7
GTEX-12ZZY-0011-R10b-SM-5HL7W 14.6
GTEX-13N1W-0011-R10b-SM-5MR4H 14.6
GTEX-X585-0011-R10A-SM-46MUY 14.6
GTEX-13CZV-0011-R10b-SM-5LZYD 14.5
GTEX-14BIN-0011-R10a-SM-5S2UA 14.5
GTEX-132Q8-0011-R10b-SM-5DUWZ 14.4
GTEX-13X6I-0011-R10a-SM-5PNWI 14.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC 14.2
GTEX-13O3Q-0011-R10b-SM-5KM39 14.1
GTEX-145LS-0011-R10a-SM-5PNUQ 14.1
GTEX-X4EP-0011-R10B-SM-4QASJ 14.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 14.0
GTEX-13QIC-0011-R10a-SM-5O9C7 13.9
GTEX-T6MN-0011-R10A-SM-32QP7 13.8
GTEX-13JUV-0011-R10b-SM-5LZXR 13.7
GTEX-QDT8-0011-R10A-SM-32PKG 13.6
GTEX-WL46-0011-R10A-SM-3MJFQ 13.6
GTEX-12126-0011-R10b-SM-5BC6T 13.5
GTEX-13NYS-0011-R10a-SM-5MR4S 13.4
GTEX-OXRN-0011-R10A-SM-2I5GC 13.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 13.3
GTEX-12WSC-0011-R10a-SM-5GU57 13.0
GTEX-13OW7-0011-R10a-SM-5L3H3 13.0
GTEX-145LU-0011-R10a-SM-5PNWJ 12.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 12.9
GTEX-147F4-0011-R10b-SM-5S2WC 12.8
GTEX-13X6J-0011-R10b-SM-5PNWA 12.6
GTEX-13SLX-0011-R10a-SM-5P9HV 12.5
GTEX-13OW8-0011-R10a-SM-5L3H6 12.4
GTEX-13SLW-0011-R10a-SM-5S2UI 12.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 12.1
GTEX-N7MS-0011-R10A-SM-2HMJK 12.0
GTEX-ZVT3-0011-R10b-SM-57WB6 11.9
GTEX-13QJC-0011-R10a-SM-5SI63 11.8
GTEX-QMR6-0011-R10A-SM-32PKO 11.8
GTEX-11WQC-0011-R10a-SM-57WCT 11.7
GTEX-RVPU-0011-R10A-SM-2XCAH 11.6
GTEX-13FXS-0011-R10a-SM-5J2MA 11.5
GTEX-NL4W-0011-R10A-SM-2I3DY 11.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 11.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 11.4
GTEX-13FLW-0011-R10b-SM-5LZZF 11.3
GTEX-P44H-0011-R10A-SM-2XCEK 11.0
GTEX-13O3O-0011-R10a-SM-5LUA9 10.8
GTEX-1445S-0011-R10a-SM-5PNWB 10.6
GTEX-QVUS-0011-R10A-SM-3GIK3 10.5
GTEX-13G51-0011-R10b-SM-5LZYF 10.4
GTEX-13N2G-0011-R10a-SM-5MR34 10.3
GTEX-TSE9-0011-R10A-SM-3DB7O 10.3
GTEX-11ZUS-0011-R10b-SM-5BC79 10.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 10.0
GTEX-ZXG5-0011-R10a-SM-57WDD 10.0
GTEX-139TS-0011-R10a-SM-5K7TU 9.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 9.1
GTEX-X261-0011-R10B-SM-4E3JT 9.1
GTEX-ZUA1-0011-R10a-SM-51MT6 9.1
GTEX-13NZA-0011-R10b-SM-5KM54 8.8
GTEX-14753-0011-R10b-SM-5S2WE 8.6
GTEX-13NYB-0011-R10a-SM-5KM43 8.5
GTEX-12WSA-0011-R10b-SM-5P9ET 8.3
GTEX-12ZZW-0011-R10b-SM-5HL9X 8.2
GTEX-131XW-0011-R10a-SM-5DUVA 8.2
GTEX-1477Z-0011-R10b-SM-5S2RF 8.0
GTEX-OXRO-0011-R10A-SM-2I5EH 8.0
GTEX-XMD1-0011-R10A-SM-4AT4A 7.8
GTEX-11WQK-0011-R10a-SM-5BC6R 7.7
GTEX-12WSD-0011-R10b-SM-5GU79 7.7
GTEX-13JVG-0011-R10b-SM-5KM2P 7.6
GTEX-ZV68-0011-R10a-SM-51MT7 7.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.3
GTEX-13IVO-0011-R10a-SM-5LZY3 6.8
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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