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STIM1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:30.1TPM
GTEx:14.5RPKM
FANTOM5:56.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA011088

  

Antibody HPA012123

  

Antibody CAB037128

  

Antibody CAB037288

  

Endothelial cells

 Medium   Medium   High   High  

Glandular cells

 High   Medium   High   High  

Peripheral nerve/ganglion

 Medium   Medium   High   Medium  
       
       
       

COLON - HPA RNA-seq

Average TPM

30.1
overview Male, age 54
Sample 1
TPM: 28.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 41.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 33.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 28.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 25.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 36.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 29.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 24.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 25.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 26.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 35.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 35.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 21.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

14.5

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 14.5
Samples: 149

Max RPKM: 24
Min RPKM: 6.8
Std RPKM: 2.5
Median RPKM: 14.5
GTEX-WFON-1326-SM-4LVMN 24.0
GTEX-YEC3-2026-SM-4WWFL 23.1
GTEX-1399R-2126-SM-5K7WZ 20.6
GTEX-11DXX-1926-SM-5EGJK 19.8
GTEX-1211K-1826-SM-5EGJ2 18.8
GTEX-ZPU1-1726-SM-4WWFV 18.7
GTEX-ZC5H-2426-SM-4WAZ6 18.5
GTEX-V955-1726-SM-4JBHF 18.4
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 14.5
Samples: 196

Max RPKM: 21.3
Min RPKM: 8
Std RPKM: 2.2
Median RPKM: 14.4
GTEX-14AS3-1126-SM-5Q5CR 21.3
GTEX-13W3W-2126-SM-5K7UX 21.1
GTEX-QLQ7-1126-SM-4R1KN 20.8
GTEX-ZXES-1626-SM-5NQ7L 20.6
GTEX-V955-1626-SM-4JBHJ 20.0
GTEX-12WSJ-1526-SM-5GCNI 19.3
GTEX-S341-1426-SM-4AD6U 18.9
GTEX-117YX-0826-SM-5H11J 18.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

56.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 56.1
FF:10014-101C5 62,83,84 years, mixed 56.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.